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Sed0025726 (gene) of Chayote v1 genome

Gene IDSed0025726
OrganismSechium edule (Chayote v1)
DescriptionRSN1_7TM domain-containing protein
Genome locationLG14:21399008..21399538
RNA-Seq ExpressionSed0025726
SyntenySed0025726
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594753.1 hypothetical protein SDJN03_11306, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4781.74Show/hide
Query:  MHHIAAKSNLVDSGSETDHGL-PLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENPLVQDV
        MHHIAAKSNLVDS  ETDH   PLCPKPRRL+PAIP+FLAP RCAH IHSQSS D RS ILNIIAGK VEGRDCLC NCYPSCYSGSPP RT NPLVQDV
Subjt:  MHHIAAKSNLVDSGSETDHGL-PLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENPLVQDV

Query:  YFVHQMELHSTFSRT
        YF+HQ+E+ S FSRT
Subjt:  YFVHQMELHSTFSRT

KAG7026720.1 hypothetical protein SDJN02_10724, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-4780.87Show/hide
Query:  MHHIAAKSNLVDSGSETDHGL-PLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENPLVQDV
        MHHIAAKSNLVDS  ETDH   PLCPKPRR++PAIP+FLAP RCAH IHSQSS D RS ILNIIAGK VEGRDCLC NCYPSCYSGSPP RT NPLVQDV
Subjt:  MHHIAAKSNLVDSGSETDHGL-PLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENPLVQDV

Query:  YFVHQMELHSTFSRT
        YF+HQ+E+ S FSRT
Subjt:  YFVHQMELHSTFSRT

XP_023518149.1 uncharacterized protein LOC111781694 [Cucurbita pepo subsp. pepo]4.5e-4780.87Show/hide
Query:  MHHIAAKSNLVDSGSETDHGL-PLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENPLVQDV
        MHHI AKSNLVDS  ETDH   PLCPKPRRL+PAIP+FLAP RCAH IHSQSS D RS ILNIIAGK VEGRDCLC NCYPSCYSGSPP RT NPLVQDV
Subjt:  MHHIAAKSNLVDSGSETDHGL-PLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENPLVQDV

Query:  YFVHQMELHSTFSRT
        YF+HQ+E+ S FSRT
Subjt:  YFVHQMELHSTFSRT

XP_031743884.1 uncharacterized protein LOC116404717 [Cucumis sativus]2.2e-4676.86Show/hide
Query:  MHHIAAKSNLVDSGSET-------DHGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTEN
        MHH A KSNLVDS  ET       ++GLPLCPKPRRL+PAIP+FLAPL CAHHIHSQSSGD+RS ILNII GK VEGRDCL S CYPSCYSGSPP RTEN
Subjt:  MHHIAAKSNLVDSGSET-------DHGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTEN

Query:  PLVQDVYFVHQMELHSTFSRT
        PLV D+YF+HQME+HS FSRT
Subjt:  PLVQDVYFVHQMELHSTFSRT

XP_038881848.1 uncharacterized protein LOC120073212 [Benincasa hispida]4.8e-4978.51Show/hide
Query:  MHHIAAKSNLVDSGSETD-------HGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTEN
        M+HIA KSNLVDSG +TD       + LPLCPKPRRL+P IP+FLAPL CAHH+HSQSSGD RSGILNIIAGK VEGRDCLCS CYPSCYSGSPP RTEN
Subjt:  MHHIAAKSNLVDSGSETD-------HGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTEN

Query:  PLVQDVYFVHQMELHSTFSRT
        PLV DVYF+HQME+HS FSRT
Subjt:  PLVQDVYFVHQMELHSTFSRT

TrEMBL top hitse value%identityAlignment
A0A0A0KHD1 Uncharacterized protein1.1e-4676.86Show/hide
Query:  MHHIAAKSNLVDSGSET-------DHGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTEN
        MHH A KSNLVDS  ET       ++GLPLCPKPRRL+PAIP+FLAPL CAHHIHSQSSGD+RS ILNII GK VEGRDCL S CYPSCYSGSPP RTEN
Subjt:  MHHIAAKSNLVDSGSET-------DHGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTEN

Query:  PLVQDVYFVHQMELHSTFSRT
        PLV D+YF+HQME+HS FSRT
Subjt:  PLVQDVYFVHQMELHSTFSRT

A0A5D3CKV6 Uncharacterized protein5.4e-4674.38Show/hide
Query:  MHHIAAKSNLVDSGSET-------DHGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTEN
        MHHIA KSNLVDS  ET       ++GLPLCPKPRRL+PAIP+FL PLRCAHHIHSQSSGD+RS +LNII GK VE RDC  S CYPSCYSGSPP RTEN
Subjt:  MHHIAAKSNLVDSGSET-------DHGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTEN

Query:  PLVQDVYFVHQMELHSTFSRT
        PLV D+YF+HQME+ S+FSRT
Subjt:  PLVQDVYFVHQMELHSTFSRT

A0A5N6QU24 Uncharacterized protein3.1e-3362.18Show/hide
Query:  MHHIAAKSNLVDSGSETD------HGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENP
        MHH AAK NLVDSGSET+      +  PLCPKPRRL P++P FL P RC+   HSQ + D R  ILNII+ K  +GR+ LC+ C PSCYSGSPP RT NP
Subjt:  MHHIAAKSNLVDSGSETD------HGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENP

Query:  LVQDVYFVHQMELHSTFSR
        LVQDV F+HQMEL S F+R
Subjt:  LVQDVYFVHQMELHSTFSR

A0A6J1BUP6 uncharacterized protein LOC1110059189.2e-4678.81Show/hide
Query:  MH-HIAAKSNLVDSGSETDHG---LPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENPLV
        MH HIA KSNLVDS  ET++    LPLCPKPRR +P IPNFL PLRCA  IHSQSSG+ R+GILNIIAGK VEGRDCLCSNCYPSCYSGSPPRRTENPLV
Subjt:  MH-HIAAKSNLVDSGSETDHG---LPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENPLV

Query:  QDVYFVHQMELHSTFSRT
         DVYF+HQMEL S FS T
Subjt:  QDVYFVHQMELHSTFSRT

A0A6P5YNC3 uncharacterized protein LOC1112932958.9e-3360Show/hide
Query:  MHHIAAKSNLVDSGSET------DHGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENP
        M H+  KSNL+DS SET       H  PLCPKPRR+ PAIP FL PL+C  + HSQ + D RSG LN+IA KT++GR+  C+ C PSCY+GSPP RT NP
Subjt:  MHHIAAKSNLVDSGSET------DHGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENP

Query:  LVQDVYFVHQMELHSTFSRT
        LV DV+F+HQMEL S F+RT
Subjt:  LVQDVYFVHQMELHSTFSRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G16110.1 unknown protein4.1e-0636.14Show/hide
Query:  LPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSG--ILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENPLVQDVYF
        L +CPKPRR+     N + PLR      +    D+++G  +L II  K   G      +  P  + GSPP R  NPL QD  F
Subjt:  LPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSG--ILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENPLVQDVYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCACATAGCAGCTAAAAGCAATCTTGTTGATTCAGGTTCTGAAACAGACCATGGCCTCCCTCTCTGCCCGAAGCCCCGACGCCTTCAACCCGCCATTCCCAATTT
CCTCGCCCCTCTTCGATGCGCCCATCACATTCACAGCCAATCGAGTGGCGATGCTAGGAGTGGAATCCTCAATATCATCGCGGGAAAGACCGTTGAAGGGAGGGATTGTT
TGTGCTCGAACTGCTACCCGTCGTGCTATTCGGGTTCCCCGCCCCGACGAACCGAGAATCCGCTGGTTCAAGACGTGTATTTTGTTCATCAAATGGAGCTTCATTCGACA
TTTTCGAGGACCGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCACATAGCAGCTAAAAGCAATCTTGTTGATTCAGGTTCTGAAACAGACCATGGCCTCCCTCTCTGCCCGAAGCCCCGACGCCTTCAACCCGCCATTCCCAATTT
CCTCGCCCCTCTTCGATGCGCCCATCACATTCACAGCCAATCGAGTGGCGATGCTAGGAGTGGAATCCTCAATATCATCGCGGGAAAGACCGTTGAAGGGAGGGATTGTT
TGTGCTCGAACTGCTACCCGTCGTGCTATTCGGGTTCCCCGCCCCGACGAACCGAGAATCCGCTGGTTCAAGACGTGTATTTTGTTCATCAAATGGAGCTTCATTCGACA
TTTTCGAGGACCGCATGA
Protein sequenceShow/hide protein sequence
MHHIAAKSNLVDSGSETDHGLPLCPKPRRLQPAIPNFLAPLRCAHHIHSQSSGDARSGILNIIAGKTVEGRDCLCSNCYPSCYSGSPPRRTENPLVQDVYFVHQMELHST
FSRTA