CuGenDBv2

Gene ID	Sed0025732
Organism	Sechium edule (Chayote v1)
Description	Cytochrome c oxidase subunit 3
Genome location	Contig00107:49942..53200
RNA-Seq Expression	Sed0025732
Synteny	Sed0025732
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR000298 - Cytochrome c oxidase subunit III-like IPR013833 - Cytochrome c oxidase, subunit III, 4-helical bundle IPR024791 - Cytochrome c oxidase subunit III IPR033945 - Cytochrome c oxidase subunit III domain IPR035973 - Cytochrome c oxidase subunit III-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AQK77817.1 cytochrome c oxidase subunit 3 [Lophophytum mirabile subsp. bolivianum]

2.7e-60

100

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

KAG6585954.1 putative ATP synthase protein YMF19, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-64

69.55

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNT ILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLA VFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIGCRYTTYEKEPQVSKVVNQTQEIVAHHTAHQLHLPLWEARSGQVRITYNTRLYEGRAWKDCTAL--GPGSEGNELGSFFST
        IYGSTFFLATGFHGFHVIIG  +       Q   + + T+E   HH   +     W      VR+     +Y    W   TAL  GPGSEGNEL S    
Subjt:  IYGSTFFLATGFHGFHVIIGCRYTTYEKEPQVSKVVNQTQEIVAHHTAHQLHLPLWEARSGQVRITYNTRLYEGRAWKDCTAL--GPGSEGNELGSFFST

Query:  LFLIRVRSACASRAIGALFS
        LFLI VRSA  +R    LFS
Subjt:  LFLIRVRSACASRAIGALFS

KEH16856.1 cytochrome C oxidase subunit 3 [Medicago truncatula]

2.7e-60

100

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

Q03227.1 RecName: Full=Cytochrome c oxidase subunit 3; AltName: Full=Cytochrome c oxidase polypeptide III [Vicia faba]

2.7e-60

100

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

QTC06374.1 cytochrome c oxidase subunit III [Pisum sativum subsp. sativum]

2.7e-60

100

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

TrEMBL top hits

e value

%identity

Alignment

A0A072TI35 Cytochrome c oxidase subunit 3

1.3e-60

100

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

A0A0B4L0J6 Cytochrome c oxidase subunit 3 (Fragment)

1.3e-60

100

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

A0A0B4L2E6 Cytochrome c oxidase subunit 3 (Fragment)

1.3e-60

100

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

A0A126TGU6 Cytochrome c oxidase subunit 3

1.3e-60

100

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

J7MPZ0 Cytochrome c oxidase subunit 3

1.3e-60

100

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

SwissProt top hits

e value

%identity

Alignment

P08745 Cytochrome c oxidase subunit 3

8.3e-60

92.74

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFF ASSHSSLAPTVEIGGIWPPKGIGVLDP EIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLA+VFTGFQGMEYYQAP TISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIGCRYT
        IYGSTF+LATGFHGFHVIIG  ++
Subjt:  IYGSTFFLATGFHGFHVIIGCRYT

P14853 Cytochrome c oxidase subunit 3

1.4e-59

96.67

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFF ASSHSSLAPTVEIGGIWPP GI VLDP EIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

P32808 Cytochrome c oxidase subunit 3

1.4e-59

92.74

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFA FRASSHSSLAPTVEIGGIWPPKGI VLDPREIPFLNTPI LSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFT FQGMEYYQAP TISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIGCRYT
        IYGSTFFLATGFHGFHVIIG  ++
Subjt:  IYGSTFFLATGFHGFHVIIGCRYT

Q03227 Cytochrome c oxidase subunit 3

3.6e-63

100

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

Q36952 Cytochrome c oxidase subunit 3

5.9e-58

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MFLFAFF ASSHSSLAPTVEIGGIWPPKGIGVLDP EIP LNTPIL SSGAAVTWAHHAILAGKEKRAVYALVATVSLALV TGFQGMEYYQAP TISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

Arabidopsis top hits

e value

%identity

Alignment

AT2G07687.1 Cytochrome c oxidase, subunit III

5.5e-59

94.17

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MF FAFF ASSHSSLAP VEIGGIWPPKGI VLDP EIPFLNTPIL SSGAAVTWAHHAILAGKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

ATMG00730.1 cytochrome c oxidase subunit 3

5.5e-59

94.17

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Query:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS
        MF FAFF ASSHSSLAP VEIGGIWPPKGI VLDP EIPFLNTPIL SSGAAVTWAHHAILAGKEKRAVYALVATV LALVFTGFQGMEYYQAPFTISDS
Subjt:  MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDS

Query:  IYGSTFFLATGFHGFHVIIG
        IYGSTFFLATGFHGFHVIIG
Subjt:  IYGSTFFLATGFHGFHVIIG

Sequences

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CDS sequence

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ATGTTCCTTTTTGCTTTTTTTCGGGCTTCTTCTCATTCTTCTTTGGCGCCCACGGTAGAAATCGGAGGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTCGGGA
AATCCCTTTTCTTAATACCCCTATTCTCCTTTCATCCGGAGCAGCCGTAACTTGGGCTCATCATGCTATACTCGCGGGGAAGGAAAAACGAGCAGTTTACGCTTTAGTAG
CTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTATTTATGGTTCTACCTTTTTCTTAGCAACT
GGCTTTCATGGTTTTCATGTGATTATAGGGTGTAGGTATACCACTTACGAGAAAGAACCCCAAGTCAGTAAAGTCGTTAACCAAACACAAGAGATAGTTGCCCATCATAC
GGCTCACCAACTTCACTTGCCTCTATGGGAGGCTCGCTCCGGGCAGGTTCGGATCACTTACAATACACGGCTCTACGAAGGAAGGGCTTGGAAAGACTGCACTGCTTTGG
GCCCAGGAAGCGAAGGGAATGAGCTCGGCAGCTTCTTCTCCACACTTTTTTTGATCCGTGTCCGTTCCGCATGCGCTTCGCGCGCCATTGGCGCTTTGTTCTCCTCTTAT
TCTTCATTGGACGGTTCGGATGGACTTCGCCGTTCTTTCCCAACTCAAATTGAAAAGGCTGTCTCACATCGAGATGTCGATTCGTTTTCCGCCCCCAATGAGATGGGGAA
TTAG

mRNA sequence

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Protein sequence

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MFLFAFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSIYGSTFFLAT
GFHGFHVIIGCRYTTYEKEPQVSKVVNQTQEIVAHHTAHQLHLPLWEARSGQVRITYNTRLYEGRAWKDCTALGPGSEGNELGSFFSTLFLIRVRSACASRAIGALFSSY
SSLDGSDGLRRSFPTQIEKAVSHRDVDSFSAPNEMGN

Sed0025732 (gene) of Chayote v1 genome