; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025742 (gene) of Chayote v1 genome

Gene IDSed0025742
OrganismSechium edule (Chayote v1)
Descriptionhomeobox-DDT domain protein RLT1 isoform X1
Genome locationLG14:19830429..19831373
RNA-Seq ExpressionSed0025742
SyntenySed0025742
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR044977 - Homeobox-DDT domain protein RLT1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581332.1 Guanylate-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2085.14Show/hide
Query:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE
        +EVSSLR EI+ELK RLETTNAR QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQER RLAE  AKKATE+ +
Subjt:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE

XP_008439803.1 PREDICTED: guanylate-binding protein 2 [Cucumis melo]8.8e-2183.78Show/hide
Query:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE
        +EVSSLR EIKELK RLE  N R QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQER +LAEHDAKKATE+ +
Subjt:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE

XP_022926091.1 guanylate-binding protein 3-like isoform X1 [Cucurbita moschata]1.5e-2085.14Show/hide
Query:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE
        +EVSSLR EI+ELK RLETTNAR QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQER RLAE  AKKATE+ +
Subjt:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE

XP_023543688.1 guanylate-binding protein 3-like isoform X1 [Cucurbita pepo subsp. pepo]1.5e-2085.14Show/hide
Query:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE
        +EVSSLR EI+ELK RLETTNAR QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQER RLAE  AKKATE+ +
Subjt:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE

XP_038881898.1 guanylate-binding protein 1 [Benincasa hispida]2.1e-2286.49Show/hide
Query:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE
        +EVSSLR EIKELK RLET NAR QSFEKEARILQQEK+HLDQKYLSEFQRFDEVQER RLAEHDAKKATE+ +
Subjt:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE

TrEMBL top hitse value%identityAlignment
A0A1S3B0B9 guanylate-binding protein 24.3e-2183.78Show/hide
Query:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE
        +EVSSLR EIKELK RLE  N R QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQER +LAEHDAKKATE+ +
Subjt:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE

A0A6J1EDH7 guanylate-binding protein 7-like isoform X27.3e-2185.14Show/hide
Query:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE
        +EVSSLR EI+ELK RLETTNAR QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQER RLAE  AKKATE+ +
Subjt:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE

A0A6J1EDW6 guanylate-binding protein 3-like isoform X17.3e-2185.14Show/hide
Query:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE
        +EVSSLR EI+ELK RLETTNAR QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQER RLAE  AKKATE+ +
Subjt:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE

A0A6J1ILM3 GB1/RHD3-type G domain-containing protein2.8e-2083.78Show/hide
Query:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE
        +EVSSLR EI+ELK RLET NAR QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQER RLAE  AKKATE+ +
Subjt:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE

A0A6J1INC8 guanylate-binding protein 3-like isoform X12.8e-2083.78Show/hide
Query:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE
        +EVSSLR EI+ELK RLET NAR QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQER RLAE  AKKATE+ +
Subjt:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQE

SwissProt top hitse value%identityAlignment
F4HY56 Homeobox-DDT domain protein RLT11.1e-1345.08Show/hide
Query:  QKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRIWKAEKRKQKEAIRKEKEALRRKAAIEKATARRIGRESMELIE
        +K +   +R    +E R + E   ++    +E +  + +RE+   R  +          +AEK+KQK+ IR+EK+A+RRK AIEKATARRI +ESM+LIE
Subjt:  QKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRIWKAEKRKQKEAIRKEKEALRRKAAIEKATARRIGRESMELIE

Query:  DEQLELMELAPANKGLSSILNL
        DEQLELMELA  +KGL S+L L
Subjt:  DEQLELMELAPANKGLSSILNL

Q9FFH1 Homeobox-DDT domain protein RLT29.5e-1040.71Show/hide
Query:  QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRIWKAEKRKQKEAIRKEKEALRRKAA
        ++ EK  R   +++  L +K   + ++  E Q+R R  E +     + +E +  L  +E+MR    +   + K    +AEK +QKE +RKEKE  R KAA
Subjt:  QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRIWKAEKRKQKEAIRKEKEALRRKAA

Query:  IEKATARRIGRESMELIEDEQLELMELAPANKGLSSILNL
         E+A AR+I +ESMELIEDE+LELME+A   KGL S+L L
Subjt:  IEKATARRIGRESMELIEDEQLELMELAPANKGLSSILNL

Arabidopsis top hitse value%identityAlignment
AT1G28420.1 homeobox-17.7e-1545.08Show/hide
Query:  QKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRIWKAEKRKQKEAIRKEKEALRRKAAIEKATARRIGRESMELIE
        +K +   +R    +E R + E   ++    +E +  + +RE+   R  +          +AEK+KQK+ IR+EK+A+RRK AIEKATARRI +ESM+LIE
Subjt:  QKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRIWKAEKRKQKEAIRKEKEALRRKAAIEKATARRIGRESMELIE

Query:  DEQLELMELAPANKGLSSILNL
        DEQLELMELA  +KGL S+L L
Subjt:  DEQLELMELAPANKGLSSILNL

AT5G44180.1 Homeodomain-like transcriptional regulator6.7e-1140.71Show/hide
Query:  QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRIWKAEKRKQKEAIRKEKEALRRKAA
        ++ EK  R   +++  L +K   + ++  E Q+R R  E +     + +E +  L  +E+MR    +   + K    +AEK +QKE +RKEKE  R KAA
Subjt:  QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRIWKAEKRKQKEAIRKEKEALRRKAA

Query:  IEKATARRIGRESMELIEDEQLELMELAPANKGLSSILNL
         E+A AR+I +ESMELIEDE+LELME+A   KGL S+L L
Subjt:  IEKATARRIGRESMELIEDEQLELMELAPANKGLSSILNL

AT5G44180.2 Homeodomain-like transcriptional regulator6.7e-1140.71Show/hide
Query:  QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRIWKAEKRKQKEAIRKEKEALRRKAA
        ++ EK  R   +++  L +K   + ++  E Q+R R  E +     + +E +  L  +E+MR    +   + K    +AEK +QKE +RKEKE  R KAA
Subjt:  QSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRIWKAEKRKQKEAIRKEKEALRRKAA

Query:  IEKATARRIGRESMELIEDEQLELMELAPANKGLSSILNL
         E+A AR+I +ESMELIEDE+LELME+A   KGL S+L L
Subjt:  IEKATARRIGRESMELIEDEQLELMELAPANKGLSSILNL

AT5G46070.1 Guanylate-binding family protein2.8e-0932.08Show/hide
Query:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRI
        +E++SLR  + E+  +L++ N +  ++EKEA  L+QEK+ ++QKY SEFQRFDEV+ER + AE +AK+ATE+ +                      K R 
Subjt:  MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRI

Query:  WKAEKRKQKEAIRKEKEALRRKAAIEKA--TARRIGRESMELIED-EQLELMELAPANK
             +K+K     ++ A+ R A IE+A      + R+  +L ++ ++L + E+   +K
Subjt:  WKAEKRKQKEAIRKEKEALRRKAAIEKA--TARRIGRESMELIED-EQLELMELAPANK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTATCTTCTTTGAGGCGTGAAATAAAAGAGCTAAAAGTGAGGTTGGAAACAACAAATGCTAGGACTCAATCATTTGAGAAAGAAGCAAGGATTTTGCAACAAGA
GAAAGTTCATTTGGATCAGAAGTACTTATCTGAATTTCAAAGGTTTGATGAAGTTCAGGAAAGGCGTAGACTTGCCGAACACGATGCGAAAAAGGCTACTGAAATGCAAG
AAATGAAGCTAGTGCTGCTCAAGAGGGAAAGAATGAGATGCAGAAGTTGGCAATGGAGCGGTTGGCCAAAATTGAGAATCTGGAAAGCTGAGAAGAGGAAACAAAAAGAA
GCTATTCGCAAAGAAAAGGAAGCATTAAGACGCAAAGCTGCTATTGAGAAGGCTACTGCTCGTAGAATTGGCCGCGAGTCTATGGAGCTTATTGAGGATGAACAGCTTGA
ACTAATGGAATTGGCACCTGCAAACAAAGGATTATCCTCCATACTAAACTTGATCATGACACTTTGCAGAATCTTGAATCTTTCCAAGGCTTGCATTGTTTTTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTATCTTCTTTGAGGCGTGAAATAAAAGAGCTAAAAGTGAGGTTGGAAACAACAAATGCTAGGACTCAATCATTTGAGAAAGAAGCAAGGATTTTGCAACAAGA
GAAAGTTCATTTGGATCAGAAGTACTTATCTGAATTTCAAAGGTTTGATGAAGTTCAGGAAAGGCGTAGACTTGCCGAACACGATGCGAAAAAGGCTACTGAAATGCAAG
AAATGAAGCTAGTGCTGCTCAAGAGGGAAAGAATGAGATGCAGAAGTTGGCAATGGAGCGGTTGGCCAAAATTGAGAATCTGGAAAGCTGAGAAGAGGAAACAAAAAGAA
GCTATTCGCAAAGAAAAGGAAGCATTAAGACGCAAAGCTGCTATTGAGAAGGCTACTGCTCGTAGAATTGGCCGCGAGTCTATGGAGCTTATTGAGGATGAACAGCTTGA
ACTAATGGAATTGGCACCTGCAAACAAAGGATTATCCTCCATACTAAACTTGATCATGACACTTTGCAGAATCTTGAATCTTTCCAAGGCTTGCATTGTTTTTGAGTAA
Protein sequenceShow/hide protein sequence
MEVSSLRREIKELKVRLETTNARTQSFEKEARILQQEKVHLDQKYLSEFQRFDEVQERRRLAEHDAKKATEMQEMKLVLLKRERMRCRSWQWSGWPKLRIWKAEKRKQKE
AIRKEKEALRRKAAIEKATARRIGRESMELIEDEQLELMELAPANKGLSSILNLIMTLCRILNLSKACIVFE