; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025758 (gene) of Chayote v1 genome

Gene IDSed0025758
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG12:3348088..3350055
RNA-Seq ExpressionSed0025758
SyntenySed0025758
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582003.1 hypothetical protein SDJN03_22005, partial [Cucurbita argyrosperma subsp. sororia]3.7e-10785.71Show/hide
Query:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ
        MKSTL+GRLQLHFPQLG RQNLTNP LHCCTA  PP I+CGLRKG  KPLG+SRVPS+ESIQAVQ+LKLAKSASKMEDVI+ KL RLLK+DL DAL+ELQ
Subjt:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ

Query:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI
        RQNELELSLQVFKFMRNEEW+EPDL+LYH MI ++GKNKMIEMAEE+FHELKRDGLEPDTRAFNEMMGAYLQV MVERAVE YE MKASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI

Query:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFL
        LIKNLE+F E+FAAVVKKECAE+LDSPEKFL
Subjt:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFL

XP_022955796.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita moschata]1.8e-10685.28Show/hide
Query:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ
        MKSTL+GRLQLHFPQLG RQNLTNP LHCCTA  PP  +CGLRKG  KPLG+SRVPS+ESIQAVQ+LKLAKSASKMEDVI+ KL RLLK+DL DAL+ELQ
Subjt:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ

Query:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI
        RQNELELSLQVFKFMRNEEW+EPDL LYH MI ++GKNKMIEMAEE+FHELKRDGLEPDTRAFNEMMGAYLQV MVERAVE YE MKASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI

Query:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFL
        LIKNLE+F E+FAAVVKKECAE+LDSPEKFL
Subjt:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFL

XP_022980054.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita maxima]6.1e-11084.58Show/hide
Query:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ
        MKSTL+GRLQLH PQLG RQNLTNP LHCCTA  PP I+CGLRKG  KPLG+SRVPS+ESIQAVQ+LKLAKSASKMEDVI+ KL RLLK+DL DAL+ELQ
Subjt:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ

Query:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI
        RQNELELSLQVFKFMRNEEW+EPDL LYH MI ++GKNKMIEMAEE+FH+ KRDGLEPDTRAFNEMMGAYLQV MVERAVE YE MKASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI

Query:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKLVK
        LIKNLE+F E+FAAVVKKECAE+LDSPEKFL DVEQKL+K
Subjt:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKLVK

XP_023527118.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita pepo subsp. pepo]1.6e-11085Show/hide
Query:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ
        MKSTL+GRLQLHFPQLG RQNLTNP LHCCTA  PP I+CGLRKG  KPLG+SRVPS+ESIQAVQ+LKLAKSASKMEDVI+ KL RLLK+DL DAL+ELQ
Subjt:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ

Query:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI
        RQNELELSLQVFKFMRNEEW+EPDL LYH MI ++GKNKMIEMAEE+FHELKRDGLEPDTRAFNEMMGAY+QV MVERAVE YE MKASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI

Query:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKLVK
        LIKNLE+F E+FAAVVKKECAE+LDSPEKFL DVEQKL+K
Subjt:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKLVK

XP_038878176.1 pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida]8.2e-10783.97Show/hide
Query:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ
        MKSTL+G LQ HFPQLGLRQ+LTNP LHCCTAA PP I+CGLRKG+ KPLGRSRVPS E+IQAVQ+LKLAKS SKMEDVI+ KL RLLK+DL DAL+ELQ
Subjt:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ

Query:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI
        RQNELELSLQVFKF++NEEW+EPDL LYHGMI++ GKNKMIEMAEEIFH+LK+DGLEPD RAFNEMMGAYLQV MVERAVE YE MKASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI

Query:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQK
        LIKNLEKF E+FAAVVKKEC  YLDSPEKFL+DVEQK
Subjt:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQK

TrEMBL top hitse value%identityAlignment
A0A1S3BX97 pentatricopeptide repeat-containing protein At1g62350-like4.1e-10479.83Show/hide
Query:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ
        MKSTL+GRLQLHFP+LGLRQNLTN  LHCCTAA PP I+CGLRKG+ KPLGRSRVPS+E+IQAVQ+LKLAK  SKMEDVI+ KL RLLK+DL DAL+ELQ
Subjt:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ

Query:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI
        RQNELELSLQVFKFM+NEEW+EPDL LYHGMIM++GKNKMIEMAEE+FH+L++DGLEPDTRAFNEMMGAYLQV M+ERA + Y  M ASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI

Query:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKL
        LIKNLEKF E+FA VVKK+C EYLD+P+KF +D  QKL
Subjt:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKL

A0A5A7TQZ8 Pentatricopeptide repeat-containing protein1.9e-10480.25Show/hide
Query:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ
        MKSTL+GRLQLHFPQLGLRQNLTN  LHCCTAA PP I+CGLRKG+ KPLGRSRVPS+E+IQAVQ+LKLAK  SKMEDVI+ KL RLLK+DL DAL+ELQ
Subjt:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ

Query:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI
        RQNELELSLQVFKFM+NEEW+EPDL LYHGMIM++GKNKMIEMAEE+FH+L++DGLEPDTRAFNEMMGAYLQV M+ERA + Y  M ASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI

Query:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKL
        LIKNLEKF E+FA VVKK+C EYLD+P+KF +D  QKL
Subjt:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKL

A0A5D3CZ95 Pentatricopeptide repeat-containing protein4.1e-10479.83Show/hide
Query:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ
        MKSTL+GRLQLHFP+LGLRQNLTN  LHCCTAA PP I+CGLRKG+ KPLGRSRVPS+E+IQAVQ+LKLAK  SKMEDVI+ KL RLLK+DL DAL+ELQ
Subjt:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ

Query:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI
        RQNELELSLQVFKFM+NEEW+EPDL LYHGMIM++GKNKMIEMAEE+FH+L++DGLEPDTRAFNEMMGAYLQV M+ERA + Y  M ASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI

Query:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKL
        LIKNLEKF E+FA VVKK+C EYLD+P+KF +D  QKL
Subjt:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKL

A0A6J1GUU8 pentatricopeptide repeat-containing protein At1g62350-like8.9e-10785.28Show/hide
Query:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ
        MKSTL+GRLQLHFPQLG RQNLTNP LHCCTA  PP  +CGLRKG  KPLG+SRVPS+ESIQAVQ+LKLAKSASKMEDVI+ KL RLLK+DL DAL+ELQ
Subjt:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ

Query:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI
        RQNELELSLQVFKFMRNEEW+EPDL LYH MI ++GKNKMIEMAEE+FHELKRDGLEPDTRAFNEMMGAYLQV MVERAVE YE MKASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI

Query:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFL
        LIKNLE+F E+FAAVVKKECAE+LDSPEKFL
Subjt:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFL

A0A6J1IY98 pentatricopeptide repeat-containing protein At1g62350-like3.0e-11084.58Show/hide
Query:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ
        MKSTL+GRLQLH PQLG RQNLTNP LHCCTA  PP I+CGLRKG  KPLG+SRVPS+ESIQAVQ+LKLAKSASKMEDVI+ KL RLLK+DL DAL+ELQ
Subjt:  MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQ

Query:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI
        RQNELELSLQVFKFMRNEEW+EPDL LYH MI ++GKNKMIEMAEE+FH+ KRDGLEPDTRAFNEMMGAYLQV MVERAVE YE MKASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKI

Query:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKLVK
        LIKNLE+F E+FAAVVKKECAE+LDSPEKFL DVEQKL+K
Subjt:  LIKNLEKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKLVK

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623502.6e-1828.5Show/hide
Query:  SSESIQAVQALKLAKSAS-KMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDG
        S E + A + LK  ++ S +++  I   + RLLKSDL+  L+E QRQN++ L +++++ +R E W+ PD+  Y  M+M+L +NK ++  ++++ +LK++ 
Subjt:  SSESIQAVQALKLAKSAS-KMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDG

Query:  LEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKILIKNL-------EKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKLVKD
        +  D   F +++  +L   +   A+ +Y  M+ S   P  L F++++K L       EK  +DF  +         D PE   +D +++   D
Subjt:  LEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKILIKNL-------EKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKLVKD

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic1.8e-1130.32Show/hide
Query:  IQAVQALKLAKSASKMEDVISIKLG--RLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEP
        I + +A+ +       + +I  K G  +LL   +L++L E       E ++QVF+ +R + W++P++ +Y  +I++LGK K  E A E+F E+  +G   
Subjt:  IQAVQALKLAKSASKMEDVISIKLG--RLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEP

Query:  DTRAFNEMMGAYLQVSMVERAVEIYESMKAS-GCTPDKLTFKILIKN-LEKFGED
        +   +  ++ AY +    + A  + E MK+S  C PD  T+ ILIK+ L+ F  D
Subjt:  DTRAFNEMMGAYLQVSMVERAVEIYESMKAS-GCTPDKLTFKILIKN-LEKFGED

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic4.0e-1131.18Show/hide
Query:  IVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEP-DLTLYHGMIMILG
        I CG R     PL + R+ S+E+IQ++Q+LK A        +    L RL+KSDL+  L EL RQ+   L++ V   +R E  + P DL LY  ++  L 
Subjt:  IVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEP-DLTLYHGMIMILG

Query:  KNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASG-----CTPDKLTFKILIKNLEKFGE-DFAAVV
        +NK  +  + +  E+       D +A  +++ A +     E  V +Y  M+ SG        D+   ++L K L + GE D A+ V
Subjt:  KNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASG-----CTPDKLTFKILIKNLEKFGE-DFAAVV

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic2.6e-1829.47Show/hide
Query:  PLGR-SRVPSSESIQAVQALK-LAKSASKMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEE
        PL R  ++   E++  +  LK L +   K++  I   + RLLK D+L  + EL+RQ E  L++++F+ ++ +EW++PD+ +Y  +I+ L K+K ++ A  
Subjt:  PLGR-SRVPSSESIQAVQALK-LAKSASKMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEE

Query:  IFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKILIKNL-------EKFGEDFAAVVKKECAEYLDSPEK
        ++ ++K++ L PD++ + E++  +L+      A+ +YE M  S   P++L F++L+K L        K  +DF  +  ++ A   D PE+
Subjt:  IFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKILIKNL-------EKFGEDFAAVVKKECAEYLDSPEK

Q9ZU27 Pentatricopeptide repeat-containing protein At1g51965, mitochondrial8.8e-1130Show/hide
Query:  LSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDK
        ++   R  E++ ++ +F+ +   +  +PD+  Y+ +I  LGKN  ++ A   F E++  GL PD   ++ +M  + +   VE A  ++E M   GC P+ 
Subjt:  LSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDK

Query:  LTFKILIKNLEKFGEDFAAV
        +T+ IL+  LEK G    AV
Subjt:  LTFKILIKNLEKFGEDFAAV

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein1.8e-1928.5Show/hide
Query:  SSESIQAVQALKLAKSAS-KMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDG
        S E + A + LK  ++ S +++  I   + RLLKSDL+  L+E QRQN++ L +++++ +R E W+ PD+  Y  M+M+L +NK ++  ++++ +LK++ 
Subjt:  SSESIQAVQALKLAKSAS-KMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDG

Query:  LEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKILIKNL-------EKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKLVKD
        +  D   F +++  +L   +   A+ +Y  M+ S   P  L F++++K L       EK  +DF  +         D PE   +D +++   D
Subjt:  LEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKILIKNL-------EKFGEDFAAVVKKECAEYLDSPEKFLDDVEQKLVKD

AT3G27750.1 FUNCTIONS IN: molecular_function unknown2.8e-1231.18Show/hide
Query:  IVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEP-DLTLYHGMIMILG
        I CG R     PL + R+ S+E+IQ++Q+LK A        +    L RL+KSDL+  L EL RQ+   L++ V   +R E  + P DL LY  ++  L 
Subjt:  IVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEP-DLTLYHGMIMILG

Query:  KNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASG-----CTPDKLTFKILIKNLEKFGE-DFAAVV
        +NK  +  + +  E+       D +A  +++ A +     E  V +Y  M+ SG        D+   ++L K L + GE D A+ V
Subjt:  KNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASG-----CTPDKLTFKILIKNLEKFGE-DFAAVV

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein1.8e-1929.47Show/hide
Query:  PLGR-SRVPSSESIQAVQALK-LAKSASKMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEE
        PL R  ++   E++  +  LK L +   K++  I   + RLLK D+L  + EL+RQ E  L++++F+ ++ +EW++PD+ +Y  +I+ L K+K ++ A  
Subjt:  PLGR-SRVPSSESIQAVQALK-LAKSASKMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEE

Query:  IFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKILIKNL-------EKFGEDFAAVVKKECAEYLDSPEK
        ++ ++K++ L PD++ + E++  +L+      A+ +YE M  S   P++L F++L+K L        K  +DF  +  ++ A   D PE+
Subjt:  IFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKILIKNL-------EKFGEDFAAVVKKECAEYLDSPEK

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain1.4e-2432.55Show/hide
Query:  RKGMNKPLGRSRVPSSESIQAVQALKLA----------------KSASKMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLT
        R    KPL R R+ S E+IQAVQALK A                 S++ ++ VI  K  RLLK D++  L EL RQNE  L+L+VF+ +R E W++P + 
Subjt:  RKGMNKPLGRSRVPSSESIQAVQALKLA----------------KSASKMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLT

Query:  LYHGMIMILGKNKMIEMAEEIFHELKRD-GLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKILIKNLEKFGE-DFAAVVKKECAEYL
        +Y  MI ++  N ++E    ++  +K + GL  +   FN ++   L   + +  ++ Y  M++ G  PD+ +F++L+  LE  GE   +A+V+++  EY 
Subjt:  LYHGMIMILGKNKMIEMAEEIFHELKRD-GLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKILIKNLEKFGE-DFAAVVKKECAEYL

Query:  DSPEKFLDDVEQ
            +F+++ E+
Subjt:  DSPEKFLDDVEQ

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-1230.32Show/hide
Query:  IQAVQALKLAKSASKMEDVISIKLG--RLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEP
        I + +A+ +       + +I  K G  +LL   +L++L E       E ++QVF+ +R + W++P++ +Y  +I++LGK K  E A E+F E+  +G   
Subjt:  IQAVQALKLAKSASKMEDVISIKLG--RLLKSDLLDALSELQRQNELELSLQVFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEP

Query:  DTRAFNEMMGAYLQVSMVERAVEIYESMKAS-GCTPDKLTFKILIKN-LEKFGED
        +   +  ++ AY +    + A  + E MK+S  C PD  T+ ILIK+ L+ F  D
Subjt:  DTRAFNEMMGAYLQVSMVERAVEIYESMKAS-GCTPDKLTFKILIKN-LEKFGED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTACTCTACTGGGTCGTCTCCAACTCCATTTTCCTCAACTGGGTCTGCGCCAAAACCTCACAAACCCAATCCTCCATTGTTGTACGGCAGCTTCACCTCCAAT
TATCGTATGTGGTCTTAGAAAGGGCATGAACAAGCCCTTGGGCAGGTCTAGGGTGCCCTCCTCTGAGTCTATTCAAGCCGTTCAGGCCCTCAAGCTCGCTAAATCCGCCT
CTAAAATGGAGGACGTAATCAGCATCAAGCTCGGCAGATTGCTGAAATCAGACTTGCTTGATGCCCTGTCTGAATTGCAGAGGCAAAATGAACTGGAGCTGTCGCTTCAG
GTCTTCAAATTTATGCGGAATGAAGAATGGTTCGAGCCAGATTTAACTTTGTACCATGGGATGATTATGATTTTGGGAAAGAACAAAATGATTGAAATGGCTGAAGAGAT
CTTCCATGAGTTGAAAAGGGATGGGTTAGAACCAGACACTAGGGCTTTTAATGAGATGATGGGAGCGTATCTGCAAGTGAGCATGGTCGAACGAGCGGTCGAGATATATG
AATCAATGAAGGCATCGGGTTGTACTCCAGATAAACTGACTTTCAAGATTTTGATCAAGAATCTAGAGAAATTTGGAGAAGATTTTGCTGCAGTGGTGAAGAAAGAATGT
GCTGAGTACTTGGATTCTCCTGAGAAATTCCTTGATGACGTCGAACAGAAACTCGTGAAAGATCGACTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTACTCTACTGGGTCGTCTCCAACTCCATTTTCCTCAACTGGGTCTGCGCCAAAACCTCACAAACCCAATCCTCCATTGTTGTACGGCAGCTTCACCTCCAAT
TATCGTATGTGGTCTTAGAAAGGGCATGAACAAGCCCTTGGGCAGGTCTAGGGTGCCCTCCTCTGAGTCTATTCAAGCCGTTCAGGCCCTCAAGCTCGCTAAATCCGCCT
CTAAAATGGAGGACGTAATCAGCATCAAGCTCGGCAGATTGCTGAAATCAGACTTGCTTGATGCCCTGTCTGAATTGCAGAGGCAAAATGAACTGGAGCTGTCGCTTCAG
GTCTTCAAATTTATGCGGAATGAAGAATGGTTCGAGCCAGATTTAACTTTGTACCATGGGATGATTATGATTTTGGGAAAGAACAAAATGATTGAAATGGCTGAAGAGAT
CTTCCATGAGTTGAAAAGGGATGGGTTAGAACCAGACACTAGGGCTTTTAATGAGATGATGGGAGCGTATCTGCAAGTGAGCATGGTCGAACGAGCGGTCGAGATATATG
AATCAATGAAGGCATCGGGTTGTACTCCAGATAAACTGACTTTCAAGATTTTGATCAAGAATCTAGAGAAATTTGGAGAAGATTTTGCTGCAGTGGTGAAGAAAGAATGT
GCTGAGTACTTGGATTCTCCTGAGAAATTCCTTGATGACGTCGAACAGAAACTCGTGAAAGATCGACTTCCTTAA
Protein sequenceShow/hide protein sequence
MKSTLLGRLQLHFPQLGLRQNLTNPILHCCTAASPPIIVCGLRKGMNKPLGRSRVPSSESIQAVQALKLAKSASKMEDVISIKLGRLLKSDLLDALSELQRQNELELSLQ
VFKFMRNEEWFEPDLTLYHGMIMILGKNKMIEMAEEIFHELKRDGLEPDTRAFNEMMGAYLQVSMVERAVEIYESMKASGCTPDKLTFKILIKNLEKFGEDFAAVVKKEC
AEYLDSPEKFLDDVEQKLVKDRLP