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Sed0025763 (gene) of Chayote v1 genome

Gene IDSed0025763
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationLG14:2046518..2047012
RNA-Seq ExpressionSed0025763
SyntenySed0025763
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144954.1 uncharacterized protein LOC101214496 [Cucumis sativus]1.9e-2242.07Show/hide
Query:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMI---------------VNMEDTLRTESNEPQLR-----FRMEKL--EQNVEDLGDC
        Y+ Q+LS+LNI  A+S+ MA R+AS+I Q  + N   N H+ A +                  E+T+  +   P ++      R E+L  E+ +E+LGDC
Subjt:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMI---------------VNMEDTLRTESNEPQLR-----FRMEKL--EQNVEDLGDC

Query:  TICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL
        +ICLDE++ +  EV++I CGHVYH+SC+ KWL N NSCPLCR PL
Subjt:  TICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL

XP_011659694.1 E3 ubiquitin-protein ligase RDUF1 [Cucumis sativus]1.9e-2242.07Show/hide
Query:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMI---------------VNMEDTLRTESNEPQLR-----FRMEKL--EQNVEDLGDC
        Y+ Q+LS+LNI  A+S+ MA R+AS+I Q  + N   N H+ A +                  E+T+  +   P ++      R E+L  E+ +E+LGDC
Subjt:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMI---------------VNMEDTLRTESNEPQLR-----FRMEKL--EQNVEDLGDC

Query:  TICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL
        +ICLDE++ +  EV++I CGHVYH+SC+ KWL N NSCPLCR PL
Subjt:  TICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL

XP_016899530.1 PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo]6.3e-2645.33Show/hide
Query:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTA----------------MIVNMEDTLRTESNEPQL-----RFRMEKL--EQNVEDLGD
        Y+ Q LS+LNI  A+S++MA ++AS+I Q  + NG  N H+ A                M    E+T+  +   P L     + R E+L  E+ VEDLGD
Subjt:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTA----------------MIVNMEDTLRTESNEPQL-----RFRMEKL--EQNVEDLGD

Query:  CTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE
        C+ICLDE++ +  EV++I CGHVYH+SC+ KWL N NSCPLCR PLPL+E
Subjt:  CTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE

XP_022944063.1 RING-H2 finger protein ATL16-like [Cucurbita moschata]1.2e-2135.5Show/hide
Query:  FYIPSTVSN-DHVHFRTYLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMIVNMEDT----------------------LRTESNEPQL
        F +P    N D V  + Y+  +L +LNI   +SE ++ ++AS+  Q  EE+   N+H+ A++ N+ ++                      +  E      
Subjt:  FYIPSTVSN-DHVHFRTYLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMIVNMEDT----------------------LRTESNEPQL

Query:  RFRMEKL---EQNVEDLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE
        R+RMEK+   E+  EDLG+C+ICLDE+  + +EV++  CGHVYH+SC+ +WL+N +SCPLCR   PL E
Subjt:  RFRMEKL---EQNVEDLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE

XP_022985641.1 RING-H2 finger protein ATL16-like [Cucurbita maxima]3.2e-2236.09Show/hide
Query:  FYIPSTVSN-DHVHFRTYLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMIVNMEDT----------------------LRTESNEPQL
        F +P    N D V  + Y+ ++L +LNI   +SE +A ++AS+  Q  EE+   N+H+ A++ N+ ++                      +  E      
Subjt:  FYIPSTVSN-DHVHFRTYLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMIVNMEDT----------------------LRTESNEPQL

Query:  RFRMEKLEQNVE---DLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE
        R+RMEK+E+  E   DLG+C+ICLDE+  + +EV++  CGHVYH+SC+ +WL+N +SCPLCR   PL E
Subjt:  RFRMEKLEQNVE---DLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE

TrEMBL top hitse value%identityAlignment
A0A0A0K2W2 RING-type domain-containing protein9.1e-2342.07Show/hide
Query:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMI---------------VNMEDTLRTESNEPQLR-----FRMEKL--EQNVEDLGDC
        Y+ Q+LS+LNI  A+S+ MA R+AS+I Q  + N   N H+ A +                  E+T+  +   P ++      R E+L  E+ +E+LGDC
Subjt:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMI---------------VNMEDTLRTESNEPQLR-----FRMEKL--EQNVEDLGDC

Query:  TICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL
        +ICLDE++ +  EV++I CGHVYH+SC+ KWL N NSCPLCR PL
Subjt:  TICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL

A0A0A0K696 RING-type domain-containing protein9.1e-2342.07Show/hide
Query:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMI---------------VNMEDTLRTESNEPQLR-----FRMEKL--EQNVEDLGDC
        Y+ Q+LS+LNI  A+S+ MA R+AS+I Q  + N   N H+ A +                  E+T+  +   P ++      R E+L  E+ +E+LGDC
Subjt:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMI---------------VNMEDTLRTESNEPQLR-----FRMEKL--EQNVEDLGDC

Query:  TICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL
        +ICLDE++ +  EV++I CGHVYH+SC+ KWL N NSCPLCR PL
Subjt:  TICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL

A0A1S4DUZ4 E3 ubiquitin-protein ligase RNF181-like3.0e-2645.33Show/hide
Query:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTA----------------MIVNMEDTLRTESNEPQL-----RFRMEKL--EQNVEDLGD
        Y+ Q LS+LNI  A+S++MA ++AS+I Q  + NG  N H+ A                M    E+T+  +   P L     + R E+L  E+ VEDLGD
Subjt:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTA----------------MIVNMEDTLRTESNEPQL-----RFRMEKL--EQNVEDLGD

Query:  CTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE
        C+ICLDE++ +  EV++I CGHVYH+SC+ KWL N NSCPLCR PLPL+E
Subjt:  CTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE

A0A5D3E1S5 E3 ubiquitin-protein ligase RNF181-like protein3.0e-2645.33Show/hide
Query:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTA----------------MIVNMEDTLRTESNEPQL-----RFRMEKL--EQNVEDLGD
        Y+ Q LS+LNI  A+S++MA ++AS+I Q  + NG  N H+ A                M    E+T+  +   P L     + R E+L  E+ VEDLGD
Subjt:  YLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTA----------------MIVNMEDTLRTESNEPQL-----RFRMEKL--EQNVEDLGD

Query:  CTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE
        C+ICLDE++ +  EV++I CGHVYH+SC+ KWL N NSCPLCR PLPL+E
Subjt:  CTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE

A0A6J1J8T7 RING-H2 finger protein ATL16-like1.6e-2236.09Show/hide
Query:  FYIPSTVSN-DHVHFRTYLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMIVNMEDT----------------------LRTESNEPQL
        F +P    N D V  + Y+ ++L +LNI   +SE +A ++AS+  Q  EE+   N+H+ A++ N+ ++                      +  E      
Subjt:  FYIPSTVSN-DHVHFRTYLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMIVNMEDT----------------------LRTESNEPQL

Query:  RFRMEKLEQNVE---DLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE
        R+RMEK+E+  E   DLG+C+ICLDE+  + +EV++  CGHVYH+SC+ +WL+N +SCPLCR   PL E
Subjt:  RFRMEKLEQNVE---DLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING16.1e-0840.74Show/hide
Query:  DLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE
        +   C +C+D+   +  E  ++ C H+YHK CLL WL   NSCP+CR  LP ++
Subjt:  DLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEE

Q08109 ERAD-associated E3 ubiquitin-protein ligase HRD12.7e-0831.87Show/hide
Query:  MEDTLRTESNEPQLRFRMEKLEQNVEDLGDCTICLDEI---------NGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEEGS
        ++DTL T +        +E+L+ +  D   C IC+DE+           KN +  ++ CGH+ H SCL  W+    +CP+CR P+  E+G+
Subjt:  MEDTLRTESNEPQLRFRMEKLEQNVEDLGDCTICLDEI---------NGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEEGS

Q6AXU4 E3 ubiquitin-protein ligase RNF1816.1e-0841.51Show/hide
Query:  CTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEEGSH
        C +CL E   +   V+++ C H++H +C+L WL+  NSCPLCR  LP ++ S+
Subjt:  CTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEEGSH

Q9CY62 E3 ubiquitin-protein ligase RNF1814.7e-0841.51Show/hide
Query:  CTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEEGSH
        C +CL E   +   V+++ C H++H +C+L WL+  NSCPLCR  LP ++ S+
Subjt:  CTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEEGSH

Q9SI09 Probable E3 ubiquitin-protein ligase XERICO3.2e-0935.58Show/hide
Query:  ENGSANLHLTAMIVNMEDTLRTESNE-PQLRF----RMEKLEQNVEDLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCN-SCPLCRAPLPLE
        EN S +      +   E  L    N  P LRF    R +K   N     +C++CL +  G ++E+ K+ CGH++HK+CL KW++  N +CPLCR PL + 
Subjt:  ENGSANLHLTAMIVNMEDTLRTESNE-PQLRF----RMEKLEQNVEDLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCN-SCPLCRAPLPLE

Query:  EGSH
           H
Subjt:  EGSH

Arabidopsis top hitse value%identityAlignment
AT1G60360.1 RING/U-box superfamily protein2.0e-0942.31Show/hide
Query:  DLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPL
        D+  CT+C++E      +  ++ C H+YHK C++ WL   NSCP+CR  LPL
Subjt:  DLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPL

AT2G04240.1 RING/U-box superfamily protein2.3e-1035.58Show/hide
Query:  ENGSANLHLTAMIVNMEDTLRTESNE-PQLRF----RMEKLEQNVEDLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCN-SCPLCRAPLPLE
        EN S +      +   E  L    N  P LRF    R +K   N     +C++CL +  G ++E+ K+ CGH++HK+CL KW++  N +CPLCR PL + 
Subjt:  ENGSANLHLTAMIVNMEDTLRTESNE-PQLRF----RMEKLEQNVEDLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCN-SCPLCRAPLPLE

Query:  EGSH
           H
Subjt:  EGSH

AT2G04240.2 RING/U-box superfamily protein2.3e-1035.58Show/hide
Query:  ENGSANLHLTAMIVNMEDTLRTESNE-PQLRF----RMEKLEQNVEDLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCN-SCPLCRAPLPLE
        EN S +      +   E  L    N  P LRF    R +K   N     +C++CL +  G ++E+ K+ CGH++HK+CL KW++  N +CPLCR PL + 
Subjt:  ENGSANLHLTAMIVNMEDTLRTESNE-PQLRF----RMEKLEQNVEDLGDCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCN-SCPLCRAPLPLE

Query:  EGSH
           H
Subjt:  EGSH

AT4G05350.1 RING/U-box superfamily protein1.1e-0926.24Show/hide
Query:  SNDHVHFRTYLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMIVNMEDTLRTESNEPQL-------RFRMEKLEQNVEDLGDCTICLDE
        S+ H H RT L   L      +   + +AP++++        +    L + A +     T+   SN+ +        R + E+ +    +   C+ICL+ 
Subjt:  SNDHVHFRTYLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMIVNMEDTLRTESNEPQL-------RFRMEKLEQNVEDLGDCTICLDE

Query:  I--NGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL
        +    K  +V +++C HV+H  CLL+WL   N+CPLCR  +
Subjt:  I--NGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL

AT4G12190.1 RING/U-box superfamily protein3.3e-0937.5Show/hide
Query:  RFRMEKLEQNVEDLGDCTICLDEI--NGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL
        R + E+L+    +   C+ICL+ +    K  ++ +++C HV+H  CLL+WL   N+CPLCR  L
Subjt:  RFRMEKLEQNVEDLGDCTICLDEI--NGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTTTTGGAAATCCAACTACGGAATCCATCTGAGAACAATGTTGTGTACTTCTATATTCCTTCCACTGTATCCAATGATCACGTGCACTTCCGAACCTACCTCGT
GCAGCTTCTGTCGACGCTCAACATCCCCACCGCCTCATCCGAAGCCATGGCTCCCAGGCTCGCGTCCTATATCTTCCAATTCATGGAGGAAAACGGAAGTGCGAACTTAC
ATTTGACCGCGATGATCGTAAACATGGAGGACACCTTGAGGACCGAGTCGAACGAACCGCAATTGAGGTTTAGAATGGAGAAATTGGAACAGAATGTGGAAGATTTGGGA
GATTGTACCATCTGTTTGGATGAAATCAATGGTAAAAATAATGAGGTGGTAAAGATCTCTTGTGGACATGTATATCATAAGTCATGCCTTCTTAAGTGGCTTAACAATTG
TAATTCTTGCCCTTTGTGTAGAGCTCCACTACCCCTTGAGGAGGGTTCACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTTTTGGAAATCCAACTACGGAATCCATCTGAGAACAATGTTGTGTACTTCTATATTCCTTCCACTGTATCCAATGATCACGTGCACTTCCGAACCTACCTCGT
GCAGCTTCTGTCGACGCTCAACATCCCCACCGCCTCATCCGAAGCCATGGCTCCCAGGCTCGCGTCCTATATCTTCCAATTCATGGAGGAAAACGGAAGTGCGAACTTAC
ATTTGACCGCGATGATCGTAAACATGGAGGACACCTTGAGGACCGAGTCGAACGAACCGCAATTGAGGTTTAGAATGGAGAAATTGGAACAGAATGTGGAAGATTTGGGA
GATTGTACCATCTGTTTGGATGAAATCAATGGTAAAAATAATGAGGTGGTAAAGATCTCTTGTGGACATGTATATCATAAGTCATGCCTTCTTAAGTGGCTTAACAATTG
TAATTCTTGCCCTTTGTGTAGAGCTCCACTACCCCTTGAGGAGGGTTCACATTGA
Protein sequenceShow/hide protein sequence
MLVLEIQLRNPSENNVVYFYIPSTVSNDHVHFRTYLVQLLSTLNIPTASSEAMAPRLASYIFQFMEENGSANLHLTAMIVNMEDTLRTESNEPQLRFRMEKLEQNVEDLG
DCTICLDEINGKNNEVVKISCGHVYHKSCLLKWLNNCNSCPLCRAPLPLEEGSH