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Sed0025768 (gene) of Chayote v1 genome

Gene IDSed0025768
OrganismSechium edule (Chayote v1)
DescriptionVID27-like protein
Genome locationLG03:20474076..20474795
RNA-Seq ExpressionSed0025768
SyntenySed0025768
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156187.1 VID27-like protein [Momordica charantia]3.8e-1635.71Show/hide
Query:  EESPESDGGE-ETEPRVI--VPRIFPAKFTDHMKKSDNEDEDEFASILFRVLAEKRLCSANIRKNRLPFTGLQTPAGNAPSFLPTAGEDAALLSGPGVGV
        ++S ESDG E ETE ++    P  FP +FT  +         +  SI  R+L EK+L  +++ +NR     L  PA           E+  + +G  + V
Subjt:  EESPESDGGE-ETEPRVI--VPRIFPAKFTDHMKKSDNEDEDEFASILFRVLAEKRLCSANIRKNRLPFTGLQTPAGNAPSFLPTAGEDAALLSGPGVGV

Query:  MVIEPDGQTVNSSLTLQRRLCIKPPSQPDRYILSGGWGELVARHGDALKRGRLVRIWWFRRRDEEGGRERLWLALDVVDE-RAGECDLASTMSDKW
         VIEPD  TV S++TL+RR      +QP  Y+L+G W ++VAR+ DALKRGR VR+W+F   D + G  RL  A++V +  + G+ +    ++ KW
Subjt:  MVIEPDGQTVNSSLTLQRRLCIKPPSQPDRYILSGGWGELVARHGDALKRGRLVRIWWFRRRDEEGGRERLWLALDVVDE-RAGECDLASTMSDKW
TrEMBL top hitse value%identityAlignment
A0A6J1DRC9 VID27-like protein1.9e-1635.71Show/hide
Query:  EESPESDGGE-ETEPRVI--VPRIFPAKFTDHMKKSDNEDEDEFASILFRVLAEKRLCSANIRKNRLPFTGLQTPAGNAPSFLPTAGEDAALLSGPGVGV
        ++S ESDG E ETE ++    P  FP +FT  +         +  SI  R+L EK+L  +++ +NR     L  PA           E+  + +G  + V
Subjt:  EESPESDGGE-ETEPRVI--VPRIFPAKFTDHMKKSDNEDEDEFASILFRVLAEKRLCSANIRKNRLPFTGLQTPAGNAPSFLPTAGEDAALLSGPGVGV

Query:  MVIEPDGQTVNSSLTLQRRLCIKPPSQPDRYILSGGWGELVARHGDALKRGRLVRIWWFRRRDEEGGRERLWLALDVVDE-RAGECDLASTMSDKW
         VIEPD  TV S++TL+RR      +QP  Y+L+G W ++VAR+ DALKRGR VR+W+F   D + G  RL  A++V +  + G+ +    ++ KW
Subjt:  MVIEPDGQTVNSSLTLQRRLCIKPPSQPDRYILSGGWGELVARHGDALKRGRLVRIWWFRRRDEEGGRERLWLALDVVDE-RAGECDLASTMSDKW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCAAGCGGTTCAGGCTCGGCATCCGGCGACGGCGGCAAGAAGAAGAAAGCGGTGGAGCAACACGGATACGTCTCGCTGACAGACGTAATCAAACAGTTAGAAGC
GGAAGAATCGCCGGAATCCGACGGCGGCGAAGAAACAGAGCCTCGAGTGATCGTTCCGAGAATCTTCCCGGCGAAATTCACGGACCACATGAAAAAATCAGACAACGAAG
ACGAAGACGAGTTCGCCAGCATTCTGTTCCGCGTTCTGGCAGAGAAGAGGCTGTGCAGCGCCAACATCCGCAAGAATCGACTGCCGTTCACCGGACTCCAGACTCCGGCG
GGGAACGCGCCGTCGTTTTTGCCCACCGCGGGGGAGGATGCGGCCCTGCTCTCCGGCCCCGGGGTTGGGGTCATGGTGATCGAGCCGGACGGCCAGACGGTGAATTCCTC
GTTGACTCTGCAGCGTCGGCTCTGCATAAAGCCGCCGTCGCAGCCGGACCGGTACATTCTGAGCGGCGGGTGGGGTGAATTGGTGGCGCGTCATGGAGACGCGCTGAAGA
GGGGGAGGTTGGTGCGGATTTGGTGGTTTCGCCGCCGTGATGAGGAGGGGGGACGGGAGCGGCTCTGGCTTGCGCTTGATGTCGTTGATGAACGCGCCGGTGAGTGCGAT
CTTGCATCCACAATGTCTGACAAATGGCATTTCAATGCTAATTCTAGCTCTTCTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCAAGCGGTTCAGGCTCGGCATCCGGCGACGGCGGCAAGAAGAAGAAAGCGGTGGAGCAACACGGATACGTCTCGCTGACAGACGTAATCAAACAGTTAGAAGC
GGAAGAATCGCCGGAATCCGACGGCGGCGAAGAAACAGAGCCTCGAGTGATCGTTCCGAGAATCTTCCCGGCGAAATTCACGGACCACATGAAAAAATCAGACAACGAAG
ACGAAGACGAGTTCGCCAGCATTCTGTTCCGCGTTCTGGCAGAGAAGAGGCTGTGCAGCGCCAACATCCGCAAGAATCGACTGCCGTTCACCGGACTCCAGACTCCGGCG
GGGAACGCGCCGTCGTTTTTGCCCACCGCGGGGGAGGATGCGGCCCTGCTCTCCGGCCCCGGGGTTGGGGTCATGGTGATCGAGCCGGACGGCCAGACGGTGAATTCCTC
GTTGACTCTGCAGCGTCGGCTCTGCATAAAGCCGCCGTCGCAGCCGGACCGGTACATTCTGAGCGGCGGGTGGGGTGAATTGGTGGCGCGTCATGGAGACGCGCTGAAGA
GGGGGAGGTTGGTGCGGATTTGGTGGTTTCGCCGCCGTGATGAGGAGGGGGGACGGGAGCGGCTCTGGCTTGCGCTTGATGTCGTTGATGAACGCGCCGGTGAGTGCGAT
CTTGCATCCACAATGTCTGACAAATGGCATTTCAATGCTAATTCTAGCTCTTCTTCTTAG
Protein sequenceShow/hide protein sequence
MKASGSGSASGDGGKKKKAVEQHGYVSLTDVIKQLEAEESPESDGGEETEPRVIVPRIFPAKFTDHMKKSDNEDEDEFASILFRVLAEKRLCSANIRKNRLPFTGLQTPA
GNAPSFLPTAGEDAALLSGPGVGVMVIEPDGQTVNSSLTLQRRLCIKPPSQPDRYILSGGWGELVARHGDALKRGRLVRIWWFRRRDEEGGRERLWLALDVVDERAGECD
LASTMSDKWHFNANSSSSS