CuGenDBv2

Gene ID	Sed0025770
Organism	Sechium edule (Chayote v1)
Description	Rab5-interacting
Genome location	LG13:19417102..19419838
RNA-Seq Expression	Sed0025770
Synteny	Sed0025770
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004145291.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

5.1e-60

89.76

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDP+ SWDKDQLGDVLHWMRQSVA+ CGLLWGS+PLVGG+WFILFLVIST M+YGYYAM+LKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

7.2e-62

89.76

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDP+ SWDKDQLGDVLHWMRQSVA+ CGLLWGS+PLVGGIWFILFLVIST M+YGYYAM+LKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

7.7e-64

95.28

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLA+LFDP+ASWDKDQLGDVLHWMRQSVA+ CGLLWGSVPLVGGIWFILFLVIST MVYGYYAM+LKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

1.7e-63

94.49

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLA+LFDP+ASWDKDQLGDVLHWMRQSVA+ CGLLWGSVPLVGGIWFI+FLVIST MVYGYYAM+LKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

2.5e-62

92.13

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG
        MKDGKS KVNSQLQHQNGHLPPFKLA LFDP+ SWDKDQLGDVLHWMRQSVA+ CGLLWGS+PLVGGIWFILFLVIST MVYGYYAM+LKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

2.5e-60

89.76

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDP+ SWDKDQLGDVLHWMRQSVA+ CGLLWGS+PLVGG+WFILFLVIST M+YGYYAM+LKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A1S3C692 uncharacterized protein C20orf24 homolog

3.5e-62

89.76

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDP+ SWDKDQLGDVLHWMRQSVA+ CGLLWGS+PLVGGIWFILFLVIST M+YGYYAM+LKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFAS+TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A5A7VQ84 Rab5-interacting

3.1e-55

84.25

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA LFDP+ SWDKDQLGDVLHWMRQSVA+ CGLLWGS+PLVGGIWFILFLVIST M+YGYYAM+LKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFAS+TLFLL   L   L  F
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

3.7e-64

95.28

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLA+LFDP+ASWDKDQLGDVLHWMRQSVA+ CGLLWGSVPLVGGIWFILFLVIST MVYGYYAM+LKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

8.3e-64

94.49

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLA+LFDP+ASWDKDQLGDVLHWMRQSVA+ CGLLWGSVPLVGGIWFI+FLVIST MVYGYYAM+LKVDEEEFGGHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLVYSLGHF
        VLLQEGLFASITLFLLMWTLVYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLVYSLGHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

5.8e-14

34.65

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASW-DKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGH
        M  G+  +   Q Q  NG L     + +    A+W DKD+  DV++W RQ +AV  G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASW-DKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGH

Query:  GVLLQEGLFASITLFLLMWTLVYSLGH
          L +EG   S  LF++     ++ GH
Subjt:  GVLLQEGLFASITLFLLMWTLVYSLGH

Q9CQT9 Respirasome Complex Assembly Factor 1

1.4e-15

34.38

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASW-DKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGH
        M  G+  +   Q Q  NG L     + +    A+W DKD+  DV++W RQ +A+  G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASW-DKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGH

Query:  GVLLQEGLFASITLFLLMWTLVYSLGHF
          L +EG   S  LF+++W + Y+  H+
Subjt:  GVLLQEGLFASITLFLLMWTLVYSLGHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

9.1e-47

66.17

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Query:  MKDGKSIKVNS------QLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEE
        MK+GKS K +S      Q+ HQN HL  F  A LFD +ASWDKDQLGDVLHW+RQ V + CGLLWG++PLVGGIW +LFL IS+ +VYGYYA+VLK+DEE
Subjt:  MKDGKSIKVNS------QLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEE

Query:  EFGGHGVLLQEGLFASITLFLLMWTLVYSLGHF
        +FGGH  LLQ+GLFAS++LFLL W LVYSL  F
Subjt:  EFGGHGVLLQEGLFASITLFLLMWTLVYSLGHF

AT5G59410.1 Rab5-interacting family protein

5.1e-50

73.08

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Query:  MKDGKSIKVN---SQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFG
        MK+ KS K+N    Q  HQN HL P KLA LFDP ASWDKDQLGDVLHW+RQ V +  GLLWGS+PLVGGIW ILFL IS+ +VYGYYAM+LKVDEE+FG
Subjt:  MKDGKSIKVN---SQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFG

Query:  GHGVLLQEGLFASITLFLLMWTLVYSLGHF
        GH  LLQEGLFAS+TLFLL W LVYSL HF
Subjt:  GHGVLLQEGLFASITLFLLMWTLVYSLGHF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGGACGGGAAGTCGATCAAGGTCAATTCTCAGTTGCAGCACCAGAACGGTCACTTGCCGCCTTTCAAATTGGCCGATTTGTTCGATCCACAGGCTTCGTGGGATAA
GGATCAACTAGGCGATGTCTTGCATTGGATGAGACAATCAGTTGCGGTTGCATGTGGGCTGCTTTGGGGTTCGGTGCCTCTGGTTGGAGGAATTTGGTTCATCTTATTCT
TGGTGATATCAACCGTGATGGTATATGGATACTACGCAATGGTTTTGAAAGTAGACGAAGAAGAATTCGGTGGTCATGGAGTTCTACTCCAGGAAGGGCTTTTTGCTTCA
ATAACTCTGTTTCTGCTTATGTGGACTCTCGTTTACAGCTTGGGGCATTTCTGA

mRNA sequence

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AACTAATGGAAAGAGATGTACAGAAAAGCCAACTCCAAAATTTGATTATTCCATTTCTTCGTTTACCATGCCGTTCTTGTTTATTCCAAAACCCTAGAATCTTCTGATCT
TGATCTCTGTCCATAACCTACTGAATTTCTCTCCAAATTTTGGATCTCCGATCAGCTTCCATGAAGGACGGGAAGTCGATCAAGGTCAATTCTCAGTTGCAGCACCAGAA
CGGTCACTTGCCGCCTTTCAAATTGGCCGATTTGTTCGATCCACAGGCTTCGTGGGATAAGGATCAACTAGGCGATGTCTTGCATTGGATGAGACAATCAGTTGCGGTTG
CATGTGGGCTGCTTTGGGGTTCGGTGCCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGGTGATATCAACCGTGATGGTATATGGATACTACGCAATGGTTTTGAAA
GTAGACGAAGAAGAATTCGGTGGTCATGGAGTTCTACTCCAGGAAGGGCTTTTTGCTTCAATAACTCTGTTTCTGCTTATGTGGACTCTCGTTTACAGCTTGGGGCATTT
CTGATGATGATTTTGTCATTGCTCTCGAGATCGGACAAAGCAACGGTGGCGACGTTGGCTGCCATGGTTGCGATTAGTGATTGTGCAGTAGCTTGCTGTCAAGGGGAGTA
ACACTCTTAGAAGTGGATTTATTTCATTAGAATTACAACTAACCAAATTCTAGTTATTATTGATTCCTGTTAAATCCAATTCAATCTTCTTAAAAGAACAATGTTCTTTT
CTGCTACCATTAGTTTCACGTTTAAGATTATGGTTCATCATTAAAATTAGTTTGTTGAGTTAGTTTTTTTTTTTCCGTACTTACACTCGTCTCAAGGCTTAGACTTTTTG
AGACCTTGCCAACACCTGAC

Protein sequence

Show/hide protein sequence

MKDGKSIKVNSQLQHQNGHLPPFKLADLFDPQASWDKDQLGDVLHWMRQSVAVACGLLWGSVPLVGGIWFILFLVISTVMVYGYYAMVLKVDEEEFGGHGVLLQEGLFAS
ITLFLLMWTLVYSLGHF

Sed0025770 (gene) of Chayote v1 genome