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Sed0025799 (gene) of Chayote v1 genome

Gene IDSed0025799
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG11:27071656..27075005
RNA-Seq ExpressionSed0025799
SyntenySed0025799
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5589053.1 hypothetical protein H5410_039567 [Solanum commersonii]3.6e-1270.59Show/hide
Query:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH
        MAN+Q+ SS PWILE++PL+VVILIAAHV A+VYWIYR+A++KQP R+K H
Subjt:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH

KAG7020426.1 hypothetical protein SDJN02_17110 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-1476.47Show/hide
Query:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH
        MAN+QR S GPW LE+IPL++V+LIAAHVFA+VYWIYRLA+QKQPPR K H
Subjt:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH

KAG7029467.1 hypothetical protein SDJN02_07806 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-1476.47Show/hide
Query:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH
        MAN++R S+GPWILE++P IVV+LIAAHVFA+VYWIY+LA+QKQPPR KAH
Subjt:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH

PHU08794.1 hypothetical protein BC332_20654 [Capsicum chinense]8.0e-1270.59Show/hide
Query:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH
        M N+Q  SS PWILE++PL+VVILIAAHV A+VYWIYRLA++KQP R+K H
Subjt:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH

PON94578.1 Transmembrane protein [Trema orientale]1.8e-1166.67Show/hide
Query:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH
        MAN+Q   + PW+L+++PL+VV+LIAAHVFA+VYWIYRLA++KQP R KAH
Subjt:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH

TrEMBL top hitse value%identityAlignment
A0A2G3BQQ1 Uncharacterized protein3.8e-1270.59Show/hide
Query:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH
        M N+Q  SS PWILE++PL+VVILIAAHV A+VYWIYRLA++KQP R+K H
Subjt:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH

A0A2I4FPQ3 uncharacterized protein LOC1090009932.5e-1169.23Show/hide
Query:  MANKQRPSSG-PWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH
        MAN+   SS  PW+LE++PL+VV+LIAAHV A+VYWIYRLAS+KQP R KAH
Subjt:  MANKQRPSSG-PWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH

A0A2P5F9W8 Transmembrane protein8.6e-1266.67Show/hide
Query:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH
        MAN+Q   + PW+L+++PL+VV+LIAAHVFA+VYWIYRLA++KQP R KAH
Subjt:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH

A0A3Q7HHC8 Uncharacterized protein1.7e-1270.59Show/hide
Query:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH
        MAN+Q+ SS PWILE++PL+VVILIAAHV A+VYWIYR+A++KQP R+K H
Subjt:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH

M1CHM3 Uncharacterized protein2.3e-1270.59Show/hide
Query:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH
        MAN+Q+ SS PWILE++PL+VVILIAAHV A+VYWIYR+A++KQP R+K H
Subjt:  MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G10745.1 unknown protein1.8e-0653.49Show/hide
Query:  PWILESIPLIVVILIAAHVFAMVYWIYRLASQK--QPPRAKAH
        PW L+ +P +VV+L AAHV A+ YWIYRLA+ +  Q  R K H
Subjt:  PWILESIPLIVVILIAAHVFAMVYWIYRLASQK--QPPRAKAH

AT5G24980.1 unknown protein2.6e-0555.56Show/hide
Query:  LESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAK
        ++ +P +VV L A HV A+VYWIYRLAS + P R K
Subjt:  LESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACAAGCAACGGCCATCATCAGGGCCCTGGATCCTCGAATCAATACCCTTGATTGTTGTCATTCTCATTGCAGCTCACGTCTTCGCTATGGTGTACTGGATTTA
TAGGTTAGCATCCCAAAAACAGCCTCCCAGGGCGAAGGCACACTGA
mRNA sequenceShow/hide mRNA sequence
ATTGAATATTCCCCGAGTAAATATTCACCATTCCTCCAAATATTCTCGGCGCCACTCCGACGGCAAATTGGACCGAGAAAACCCTCGATCAAGCTAGGGTTTATCTTCTC
CACTCTTCAATCTCTCAACCTATCTTTCACCGGCGAAAATGGCGAACAAGCAACGGCCATCATCAGGGCCCTGGATCCTCGAATCAATACCCTTGATTGTTGTCATTCTC
ATTGCAGCTCACGTCTTCGCTATGGTGTACTGGATTTATAGGTTAGCATCCCAAAAACAGCCTCCCAGGGCGAAGGCACACTGAGTTACTCTGTGATTCCTTCCTCGAAT
AAACTTTAGGGAAACCCTAATTCGTTGATTTTGTGTCACTCATGTTGTGGAGGCGGTCTAAAGAGCTTTATGGAAATGTTTCTCTTGAAAAGTCGAGTAACGAAGAAAGT
GATCATGCAAGATGCCCTATGAAGAGGACCATGTGGAGCAAGGCAAATACACAGACCTAACGTCAACCATACGGTGCTCATCTTGGTATTCATGATCTCCATTTTGTGGT
TTTCTTTTCGCTTTTGCACCTTATGAATAAAGACAATTGTCAGGTTCTGGTTTGGCTTGTTCTTGAACATACATTATGCTCAAGTATCTTTGTAGTGATTAGATTGTAAA
TTTTCTTCTTTGTTCGTGAATAAAGATAATCCATTTGCCAAATGATTAAACATGTATTTGTAGTGATTAGATTGTAAATCTTCCCCGTTGTTGTTATTTAATAATCAAAC
TGATGTCCAACAATGCATTTCATGACATAATCACCA
Protein sequenceShow/hide protein sequence
MANKQRPSSGPWILESIPLIVVILIAAHVFAMVYWIYRLASQKQPPRAKAH