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Sed0025816 (gene) of Chayote v1 genome

Gene IDSed0025816
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:7041151..7041467
RNA-Seq ExpressionSed0025816
SyntenySed0025816
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057217.1 hypothetical protein E6C27_scaffold280G00510 [Cucumis melo var. makuwa]2.9e-0752.63Show/hide
Query:  MAGLQYNFFPTDFLYPRPPPS--VAADATVSVVPPKTDDSKA-PLHRQSLILHVNDNNSIIQPVVVSRT-PKRSEF
        MAGLQY FFPTDFLYPRP  S  V  +  VSVVPPK DD  A P   +SL  +      +++P+V+SR  PK S F
Subjt:  MAGLQYNFFPTDFLYPRPPPS--VAADATVSVVPPKTDDSKA-PLHRQSLILHVNDNNSIIQPVVVSRT-PKRSEF

KAG6581666.1 putative galacturonosyltransferase 14, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0761.02Show/hide
Query:  LQYNFFPTDFLYPRPPPSVAADATVSVVPPKTDDSKAPLHRQSLILHVNDNNSIIQPVV
        LQY FFPTDFLYPRPP S  AD  VSVVPPK+DDS A    +   LH N N   +QP+V
Subjt:  LQYNFFPTDFLYPRPPPSVAADATVSVVPPKTDDSKAPLHRQSLILHVNDNNSIIQPVV

KAG6769137.1 hypothetical protein POTOM_024753 [Populus tomentosa]8.6e-0441.67Show/hide
Query:  MAGLQYNFFPTDFLYPRP-----PPSVAADATVSVVPPK--------TDDSKAPLHRQSLILHVNDNNSIIQPVVVSRTPKRSE
        MAGLQYNFFPTDF YPRP       + AA    + +P +        T D K   H  SL+LH N + S I+  V+S   +R E
Subjt:  MAGLQYNFFPTDFLYPRP-----PPSVAADATVSVVPPK--------TDDSKAPLHRQSLILHVNDNNSIIQPVVVSRTPKRSE

KAG8646468.1 hypothetical protein MANES_09G009400v8 [Manihot esculenta]3.9e-0460Show/hide
Query:  MAGLQYNFFPTDFLYPRPPPSVAADATVSVVPP----KTDDSKAP
        MAGLQY+FFPTDF YPRPPPS     T   V P    K DD K P
Subjt:  MAGLQYNFFPTDFLYPRPPPSVAADATVSVVPP----KTDDSKAP

KGN59725.1 hypothetical protein Csa_002570 [Cucumis sativus]2.9e-0750.65Show/hide
Query:  MAGLQYNFFPTDFLYPRPPPS--VAADATVSVVPPKTDDSKAPLHRQSLILHVNDNNS--IIQPVVVSR-TPKRSEF
        MAGLQY FFPTDFLYPRP  S  V  +  VSVVPPK DD  A   +    +H  +N +   ++P+V+SR  PK S F
Subjt:  MAGLQYNFFPTDFLYPRPPPS--VAADATVSVVPPKTDDSKAPLHRQSLILHVNDNNS--IIQPVVVSR-TPKRSEF

TrEMBL top hitse value%identityAlignment
A0A0A0LCI2 Uncharacterized protein1.4e-0750.65Show/hide
Query:  MAGLQYNFFPTDFLYPRPPPS--VAADATVSVVPPKTDDSKAPLHRQSLILHVNDNNS--IIQPVVVSR-TPKRSEF
        MAGLQY FFPTDFLYPRP  S  V  +  VSVVPPK DD  A   +    +H  +N +   ++P+V+SR  PK S F
Subjt:  MAGLQYNFFPTDFLYPRPPPS--VAADATVSVVPPKTDDSKAPLHRQSLILHVNDNNS--IIQPVVVSR-TPKRSEF

A0A2C9V814 Uncharacterized protein1.9e-0460Show/hide
Query:  MAGLQYNFFPTDFLYPRPPPSVAADATVSVVPP----KTDDSKAP
        MAGLQY+FFPTDF YPRPPPS     T   V P    K DD K P
Subjt:  MAGLQYNFFPTDFLYPRPPPSVAADATVSVVPP----KTDDSKAP

A0A2P5WLS8 Uncharacterized protein5.4e-0444.59Show/hide
Query:  MAGLQYNFFPTDFLYPRPP-PSVAADATVSVVPPKTDDSKAPLHRQSLILHVNDNNSIIQ---PVVVSRTPKRS
        MAGLQYNFFPTDF YPRPP P+   D+T    PP T     P+ ++ +++  N++    Q   PVV  R  K S
Subjt:  MAGLQYNFFPTDFLYPRPP-PSVAADATVSVVPPKTDDSKAPLHRQSLILHVNDNNSIIQ---PVVVSRTPKRS

A0A5A7URF0 Uncharacterized protein1.4e-0752.63Show/hide
Query:  MAGLQYNFFPTDFLYPRPPPS--VAADATVSVVPPKTDDSKA-PLHRQSLILHVNDNNSIIQPVVVSRT-PKRSEF
        MAGLQY FFPTDFLYPRP  S  V  +  VSVVPPK DD  A P   +SL  +      +++P+V+SR  PK S F
Subjt:  MAGLQYNFFPTDFLYPRPPPS--VAADATVSVVPPKTDDSKA-PLHRQSLILHVNDNNSIIQPVVVSRT-PKRSEF

A0A5D2PP86 Uncharacterized protein5.4e-0444.59Show/hide
Query:  MAGLQYNFFPTDFLYPRPP-PSVAADATVSVVPPKTDDSKAPLHRQSLILHVNDNNSIIQ---PVVVSRTPKRS
        MAGLQYNFFPTDF YPRPP P+   D+T    PP T     P+ ++ +++  N++    Q   PVV  R  K S
Subjt:  MAGLQYNFFPTDFLYPRPP-PSVAADATVSVVPPKTDDSKAPLHRQSLILHVNDNNSIIQ---PVVVSRTPKRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTCTCCAATACAACTTCTTCCCCACGGACTTCCTCTACCCTCGTCCCCCGCCCTCGGTCGCTGCCGACGCCACCGTCTCCGTCGTTCCCCCGAAAACCGACGA
CTCTAAGGCCCCGCTCCACCGCCAATCCTTGATCCTCCATGTCAATGACAACAATTCTATTATTCAACCGGTCGTCGTCTCCCGCACTCCCAAACGATCCGAATTCTAA
mRNA sequenceShow/hide mRNA sequence
AAACAACGCAAACAAATCCTTCCTTTTCTTCTCTTTCCCTTCCATGGCCGGTCTCCAATACAACTTCTTCCCCACGGACTTCCTCTACCCTCGTCCCCCGCCCTCGGTCG
CTGCCGACGCCACCGTCTCCGTCGTTCCCCCGAAAACCGACGACTCTAAGGCCCCGCTCCACCGCCAATCCTTGATCCTCCATGTCAATGACAACAATTCTATTATTCAA
CCGGTCGTCGTCTCCCGCACTCCCAAACGATCCGAATTCTAAATTGTAGGATTTACTTTTCTTGCGAATTCGATTGGTGTAATCTTATTAGTATGTG
Protein sequenceShow/hide protein sequence
MAGLQYNFFPTDFLYPRPPPSVAADATVSVVPPKTDDSKAPLHRQSLILHVNDNNSIIQPVVVSRTPKRSEF