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Sed0025835 (gene) of Chayote v1 genome

Gene IDSed0025835
OrganismSechium edule (Chayote v1)
Descriptionrhodanese-like domain-containing protein 4, chloroplastic
Genome locationLG02:42363551..42365210
RNA-Seq ExpressionSed0025835
SyntenySed0025835
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008061 - chitin binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR036873 - Rhodanese-like domain superfamily
IPR044240 - Rhodanese-like domain-containing protein STR4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597089.1 Rhodanese-like domain-containing protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.3e-5987.22Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS   LTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA

KGN56436.1 hypothetical protein Csa_011223 [Cucumis sativus]1.6e-5885.07Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        NAQLLDIR  +E+RKVG+PD+K LGKKPV ITYKG+DKPGFLKKL LKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDGAEGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVAT
        PWLTPK  LS S LTDAIAG FGEDSEG PAVAT
Subjt:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVAT

XP_023539430.1 rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]7.3e-5987.22Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS   LTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA

XP_023539567.1 rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]7.3e-5987.22Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS   LTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA

XP_038896514.1 rhodanese-like domain-containing protein 4, chloroplastic [Benincasa hispida]2.5e-5987.31Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        NAQLLDIR  VELRKVG PD+K LGKKPV ITY G+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAI DGAEGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVAT
        PWLTPKS LS S LTDAIAG FGEDSEG PAVAT
Subjt:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVAT

TrEMBL top hitse value%identityAlignment
A0A0A0L8L6 Rhodanese domain-containing protein7.9e-5985.07Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        NAQLLDIR  +E+RKVG+PD+K LGKKPV ITYKG+DKPGFLKKL LKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDGAEGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVAT
        PWLTPK  LS S LTDAIAG FGEDSEG PAVAT
Subjt:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVAT

A0A5A7TZ61 Rhodanese-like domain-containing protein 45.1e-5884.33Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        NAQLLDIR  VE+RKVG+PD+K LGKKPV I YKG+DKPGFLKKL LKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDGAEGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVAT
        PWLTPK  LS   LTDAIAG FGEDSEG PAVAT
Subjt:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVAT

A0A6J1FCG4 rhodanese-like domain-containing protein 4, chloroplastic1.8e-5886.47Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPG LKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS   LTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA

A0A6J1II89 rhodanese-like domain-containing protein 4, chloroplastic isoform X11.3e-5886.47Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS   LTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA

A0A6J1IJ07 rhodanese-like domain-containing protein 4, chloroplastic1.3e-5886.47Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS   LTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVA

SwissProt top hitse value%identityAlignment
A2X345 Protein THYLAKOID RHODANESE-LIKE, chloroplastic4.0e-3655.81Show/hide
Query:  AQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGLP
        AQL+DIR   + R+ G+PD+++  KK   + Y G+DK GFLKKL+L+FK+P+NTTL ILDK+DGNSELVAEL+  NG+KA FA+KDGAEG RGW +S LP
Subjt:  AQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGLP

Query:  WLTPKSPLSFSDLTDAIAGVFGEDSEGFP
        W  PK   S SDL        G+ ++G P
Subjt:  WLTPKSPLSFSDLTDAIAGVFGEDSEGFP

Q56XR7 Rhodanese-like domain-containing protein 4A, chloroplastic2.9e-1843.43Show/hide
Query:  KTTKNAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGW
        K   ++QLLDIR++  L  + SP++K LGK  V + +  +D+ GFL K+   F + +NT + +LD +DGNS  VAEL++ NGFK  + I+ GA G  GW
Subjt:  KTTKNAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGW

Q6ETQ7 Protein THYLAKOID RHODANESE-LIKE, chloroplastic4.0e-3655.81Show/hide
Query:  AQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGLP
        AQL+DIR   + R+ G+PD+++  KK   + Y G+DK GFLKKL+L+FK+P+NTTL ILDK+DGNSELVAEL+  NG+KA FA+KDGAEG RGW +S LP
Subjt:  AQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGLP

Query:  WLTPKSPLSFSDLTDAIAGVFGEDSEGFP
        W  PK   S SDL        G+ ++G P
Subjt:  WLTPKSPLSFSDLTDAIAGVFGEDSEGFP

Q9M158 Rhodanese-like domain-containing protein 4, chloroplastic2.7e-4869.17Show/hide
Query:  TTKNAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTN
        T  NAQLLDIR   + R+VGSP+IK LGKK V   Y G+DKPGFLKKL+LKFK+P+NTTL+ILDK+DGNSELVAEL+ +NGFK+ +AIKDGAEGPRGW N
Subjt:  TTKNAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTN

Query:  SGLPWLTPKSPLS--FSDLTDAIAGVFGEDSEG
        S LPW+ PK  LS   S LTD+I+GVFGE S+G
Subjt:  SGLPWLTPKSPLS--FSDLTDAIAGVFGEDSEG

Arabidopsis top hitse value%identityAlignment
AT3G25480.1 Rhodanese/Cell cycle control phosphatase superfamily protein2.1e-1943.43Show/hide
Query:  KTTKNAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGW
        K   ++QLLDIR++  L  + SP++K LGK  V + +  +D+ GFL K+   F + +NT + +LD +DGNS  VAEL++ NGFK  + I+ GA G  GW
Subjt:  KTTKNAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGW

AT4G01050.1 thylakoid rhodanese-like1.9e-4969.17Show/hide
Query:  TTKNAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTN
        T  NAQLLDIR   + R+VGSP+IK LGKK V   Y G+DKPGFLKKL+LKFK+P+NTTL+ILDK+DGNSELVAEL+ +NGFK+ +AIKDGAEGPRGW N
Subjt:  TTKNAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTN

Query:  SGLPWLTPKSPLS--FSDLTDAIAGVFGEDSEG
        S LPW+ PK  LS   S LTD+I+GVFGE S+G
Subjt:  SGLPWLTPKSPLS--FSDLTDAIAGVFGEDSEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGAAAATGGAGAAAAACAACAAAGAATGCTCAACTACTTGATATTAGAGAGCTGGTTGAACTTAGGAAAGTAGGTAGCCCTGATATTAAAAAGTTGGGCAAAAA
GCCTGTGGTTATTACTTACAAAGGTGACGATAAGCCTGGTTTCTTGAAGAAGCTTGCTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATCTTGGACAAATATG
ATGGGAACTCTGAACTCGTCGCAGAGTTGATCGTTGTAAATGGATTCAAAGCTACTTTTGCAATTAAAGATGGTGCAGAAGGACCTCGTGGATGGACGAATAGTGGTCTT
CCTTGGTTAACACCAAAGTCACCTTTGAGTTTTAGCGATCTAACAGATGCTATTGCTGGTGTGTTTGGAGAGGATTCTGAAGGTTTCCCTGCTGTTGCTACTGTGCAATA
TGTTGATTGTGTGATGGATACAATGGAAAAACAAACAAACAACAATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGAAAATGGAGAAAAACAACAAAGAATGCTCAACTACTTGATATTAGAGAGCTGGTTGAACTTAGGAAAGTAGGTAGCCCTGATATTAAAAAGTTGGGCAAAAA
GCCTGTGGTTATTACTTACAAAGGTGACGATAAGCCTGGTTTCTTGAAGAAGCTTGCTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATCTTGGACAAATATG
ATGGGAACTCTGAACTCGTCGCAGAGTTGATCGTTGTAAATGGATTCAAAGCTACTTTTGCAATTAAAGATGGTGCAGAAGGACCTCGTGGATGGACGAATAGTGGTCTT
CCTTGGTTAACACCAAAGTCACCTTTGAGTTTTAGCGATCTAACAGATGCTATTGCTGGTGTGTTTGGAGAGGATTCTGAAGGTTTCCCTGCTGTTGCTACTGTGCAATA
TGTTGATTGTGTGATGGATACAATGGAAAAACAAACAAACAACAATATTTGA
Protein sequenceShow/hide protein sequence
MQGKWRKTTKNAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
PWLTPKSPLSFSDLTDAIAGVFGEDSEGFPAVATVQYVDCVMDTMEKQTNNNI