; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025844 (gene) of Chayote v1 genome

Gene IDSed0025844
OrganismSechium edule (Chayote v1)
DescriptionMediator of RNA polymerase II transcription subunit 6
Genome locationLG06:45664334..45668141
RNA-Seq ExpressionSed0025844
SyntenySed0025844
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR007018 - Mediator complex, subunit Med6
IPR016820 - Mediator complex, subunit Med6, metazoa/plant
IPR038566 - Mediator complex, subunit Med6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606737.1 Mediator of RNA polymerase II transcription subunit 6, partial [Cucurbita argyrosperma subsp. sororia]4.9e-13194.4Show/hide
Query:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF
        MAT PPPGIGNFEG  PPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRS+HPLDLSQL+KMTGIEYMLNEVMEPHLF
Subjt:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF

Query:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP
        VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFA+RVSRALYYISKAFTTASSKLEKIGYVDSE E+EEVKP K TIDFKEVKRVDRILASLQRKLP
Subjt:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP

Query:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        PAPPPPPFPEGYVPAP SEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

XP_008447572.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6 isoform X1 [Cucumis melo]8.7e-12892.74Show/hide
Query:  TTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVF
        TT PPG GNFEG   PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRS+HPLDLSQL+KMTGIEYMLNEVMEPHLFVF
Subjt:  TTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVF

Query:  RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLPPA
        RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFA+RVSRALYYISKAFTTASSKLEKIGYVDSE ESEEVKP KETI+FKEVKRVD ILASLQRKLPPA
Subjt:  RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLPPA

Query:  PPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        PPPPPFPEGY PAPT++ EKGPENQQGE QQP ADPIIDQGPAKRMKF
Subjt:  PPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

XP_022948318.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita moschata]4.9e-13194.8Show/hide
Query:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF
        MAT PPPGIGNFEG  P AAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRS+HPLDLSQL+KMTGIEYMLNEVMEPHLF
Subjt:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF

Query:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP
        VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFA+RVSRALYYISKAFTTASSKLEKIGYVDSE ESEEVKP KETIDFKEVKRVDRILASLQRKLP
Subjt:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP

Query:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        PAPPPPPFPEGYVPAP SEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

XP_022998637.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita maxima]4.2e-13094Show/hide
Query:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF
        MAT PPPGIGNFEG  PPAAPQ PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRS+HPLDLSQL+KMTGIEYMLNEVMEPHLF
Subjt:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF

Query:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP
        VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFA+RVSRALYYISKAFTTASSKLEKIGYVDSE ESE+VKP K TIDFKEVKRVDRILASLQRKLP
Subjt:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP

Query:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        PAPPPPPFPEGYVPAP SEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

XP_023524903.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita pepo subsp. pepo]2.2e-13194.8Show/hide
Query:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF
        MAT PPPGIGNFEG  PPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRS+HPLDLSQL+KMTGIEYMLNEVMEPHLF
Subjt:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF

Query:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP
        VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFA+RVSRALYYISKAFTTASSKLEKIGYVDSE ESEEVKP K TIDFKEVKRVDRILASLQRKLP
Subjt:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP

Query:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        PAPPPPPFPEGYVPAP SEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

TrEMBL top hitse value%identityAlignment
A0A1S3BHR9 Mediator of RNA polymerase II transcription subunit 64.2e-12892.74Show/hide
Query:  TTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVF
        TT PPG GNFEG   PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRS+HPLDLSQL+KMTGIEYMLNEVMEPHLFVF
Subjt:  TTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVF

Query:  RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLPPA
        RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFA+RVSRALYYISKAFTTASSKLEKIGYVDSE ESEEVKP KETI+FKEVKRVD ILASLQRKLPPA
Subjt:  RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLPPA

Query:  PPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        PPPPPFPEGY PAPT++ EKGPENQQGE QQP ADPIIDQGPAKRMKF
Subjt:  PPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

A0A5D3CDR8 Mediator of RNA polymerase II transcription subunit 64.2e-12892.74Show/hide
Query:  TTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVF
        TT PPG GNFEG   PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRS+HPLDLSQL+KMTGIEYMLNEVMEPHLFVF
Subjt:  TTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVF

Query:  RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLPPA
        RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFA+RVSRALYYISKAFTTASSKLEKIGYVDSE ESEEVKP KETI+FKEVKRVD ILASLQRKLPPA
Subjt:  RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLPPA

Query:  PPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        PPPPPFPEGY PAPT++ EKGPENQQGE QQP ADPIIDQGPAKRMKF
Subjt:  PPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

A0A6J1D4P7 Mediator of RNA polymerase II transcription subunit 66.1e-12791.34Show/hide
Query:  MATTP----PPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVME
        MAT P    PPGI NFEG  PPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRS+HPLDLSQL+KMTG EYMLNEVME
Subjt:  MATTP----PPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFA+RVSRALYYISKAFTTASSKLEKIGYVDSE ESEEVKP KETI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAPT+E EKGPENQ  E QQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

A0A6J1G911 Mediator of RNA polymerase II transcription subunit 62.4e-13194.8Show/hide
Query:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF
        MAT PPPGIGNFEG  P AAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRS+HPLDLSQL+KMTGIEYMLNEVMEPHLF
Subjt:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF

Query:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP
        VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFA+RVSRALYYISKAFTTASSKLEKIGYVDSE ESEEVKP KETIDFKEVKRVDRILASLQRKLP
Subjt:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP

Query:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        PAPPPPPFPEGYVPAP SEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

A0A6J1K8I9 Mediator of RNA polymerase II transcription subunit 62.0e-13094Show/hide
Query:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF
        MAT PPPGIGNFEG  PPAAPQ PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRS+HPLDLSQL+KMTGIEYMLNEVMEPHLF
Subjt:  MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLF

Query:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP
        VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFA+RVSRALYYISKAFTTASSKLEKIGYVDSE ESE+VKP K TIDFKEVKRVDRILASLQRKLP
Subjt:  VFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLP

Query:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        PAPPPPPFPEGYVPAP SEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  PAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

SwissProt top hitse value%identityAlignment
F4IXJ7 Mediator of RNA polymerase II transcription subunit 64.7e-8460.21Show/hide
Query:  GNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDG
        GN     PP   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RS+HPLDLS L+KMTG+EYML +  EP+LFVFRKQKRDG
Subjt:  GNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDG

Query:  PEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDS
        PEKVTPMLTYYILDGSIYQAPQLC+VFA+RVSR +Y ISKAFT A+SKLE I                                     G+       ++
Subjt:  PEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDS

Query:  EIESEEVKPVKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        + E  E KP  ET+D KE+KRVD IL SL RKL P PPPPPFPEGYV       ++    Q GE Q P  DPIIDQGPAKRMKF
Subjt:  EIESEEVKPVKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

Q3SZY9 Mediator of RNA polymerase II transcription subunit 65.1e-2236.51Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L +M G+EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFASRVSRALYYISKAFTTASSKLE---KIGYVDSEIESEEVKPVKETIDFKEV-------KRVDRILASLQRKLPPAPPPPPFPEGYVP
         IYQAP L +V  SRV  A++ I  AF  A S        GY     + EE   VK  +  KE        +RVD +L  L++K PP        E  VP
Subjt:  SIYQAPQLCNVFASRVSRALYYISKAFTTASSKLE---KIGYVDSEIESEEVKPVKETIDFKEV-------KRVDRILASLQRKLPPAPPPPPFPEGYVP

Query:  APTS--EAEKGPENQQGEPQQPPADPIIDQG----PAKRMK
           +  EAE  PE  + E ++   +     G    P KRM+
Subjt:  APTS--EAEKGPENQQGEPQQPPADPIIDQG----PAKRMK

Q54PN3 Putative mediator of RNA polymerase II transcription subunit 61.3e-2536.99Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI
        D+T + +RD LWL  YPL+   +  YF+ S FYD  CNNEQL+M+    LDLS L  M G+EY L + +EP  F+  KQ R  P  V     YY+++G+I
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI

Query:  YQAPQLCNVFASRVSRALYYISKAFTTASSKLE---KIGY---VDSEIESEEVK-PVKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAPTSE
        YQAP+L  VF SRVS+++ ++S+AF + SS +      GY   +D   + E+ K         ++ KR+D+++ SL  K P    P   P+      T  
Subjt:  YQAPQLCNVFASRVSRALYYISKAFTTASSKLE---KIGY---VDSEIESEEVK-PVKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAPTSE

Query:  AEKGPENQQGEPQQPPADP
                   PQQ P+ P
Subjt:  AEKGPENQQGEPQQPPADP

Q7Q107 Mediator of RNA polymerase II transcription subunit 68.7e-2234.89Show/hide
Query:  ICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQ
        I + D  W+    L+   V DYF+   +PFYD TCNNE +RM+      L  L  MTG+EY+   V +P L+V RKQ R  P + TPM  YYI+ G++YQ
Subjt:  ICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQ

Query:  APQLCNVFASRVSRALYYISKAFTTASS--------------KLEKIGYVDSEIESEEVKPVK-ETIDFKEVKRVDRILASLQRKLP-PAPPPPPFPEGY
        AP L +VF SR+   ++++  AF  ASS                 K     ++ ++++  PVK E     + +RVD +L  L RK P P P     P G 
Subjt:  APQLCNVFASRVSRALYYISKAFTTASS--------------KLEKIGYVDSEIESEEVKPVK-ETIDFKEVKRVDRILASLQRKLP-PAPPPPPFPEGY

Query:  VPAPTSEAEKGPENQQGEPQQPPAD-PIIDQGPAK
         P+ T+ A        G+     AD  +I Q P +
Subjt:  VPAPTSEAEKGPENQQGEPQQPPAD-PIIDQGPAK

Q921D4 Mediator of RNA polymerase II transcription subunit 63.0e-2236.93Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L +M GIEY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFASRVSRALYYISKAFTTASSKLE---KIGY---VDSEIESEEVKP----VKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVP
         IYQAP L +V  SRV  A++ I  AF  A S        GY        E E+VKP     +E     + +RVD +L  L++K PP        E  VP
Subjt:  SIYQAPQLCNVFASRVSRALYYISKAFTTASSKLE---KIGY---VDSEIESEEVKP----VKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVP

Query:  APTS--EAEKGPENQQGEPQQPPAD---PIIDQG-PAKRMK
           +  EAE  PE  + E ++   +    +  +G P KRM+
Subjt:  APTS--EAEKGPENQQGEPQQPPAD---PIIDQG-PAKRMK

Arabidopsis top hitse value%identityAlignment
AT3G21350.1 RNA polymerase transcriptional regulation mediator-related1.1e-9171.19Show/hide
Query:  GNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDG
        GN     PP   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RS+HPLDLS L+KMTG+EYML +  EP+LFVFRKQKRDG
Subjt:  GNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDG

Query:  PEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESE--EVKPVKETIDFKEVKRVDRILASLQRKLPPAPPPPP
        PEKVTPMLTYYILDGSIYQAPQLC+VFA+RVSR +Y ISKAFT A+SKLE I  VD+E ++E  E KP  ET+D KE+KRVD IL SL RKL P PPPPP
Subjt:  PEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESE--EVKPVKETIDFKEVKRVDRILASLQRKLPPAPPPPP

Query:  FPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        FPEGYV       ++    Q GE Q P  DPIIDQGPAKRMKF
Subjt:  FPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

AT3G21350.2 RNA polymerase transcriptional regulation mediator-related3.3e-8560.21Show/hide
Query:  GNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDG
        GN     PP   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RS+HPLDLS L+KMTG+EYML +  EP+LFVFRKQKRDG
Subjt:  GNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDG

Query:  PEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDS
        PEKVTPMLTYYILDGSIYQAPQLC+VFA+RVSR +Y ISKAFT A+SKLE I                                     G+       ++
Subjt:  PEKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDS

Query:  EIESEEVKPVKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        + E  E KP  ET+D KE+KRVD IL SL RKL P PPPPPFPEGYV       ++    Q GE Q P  DPIIDQGPAKRMKF
Subjt:  EIESEEVKPVKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAPTSEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTACACCGCCACCGGGGATCGGGAATTTCGAGGGGGCAGCGCCGCCGGCAGCGCCTCAGCCGCCAGGCACGGACATGACCGGAATTTGCTTCAGAGACCAACT
CTGGCTCAATACTTACCCTCTCGATCGGAACCTGGTGTTCGATTACTTCGCCTTGTCCCCTTTCTACGACTGGACTTGTAACAACGAACAGCTCCGAATGCGCTCCGTTC
ACCCCCTCGATCTCTCTCAACTCACAAAAATGACAGGGATAGAGTATATGCTGAATGAAGTTATGGAGCCTCACCTTTTCGTTTTCCGAAAGCAAAAGAGGGATGGTCCT
GAAAAAGTCACACCAATGCTGACTTATTATATCTTAGACGGTTCGATTTACCAGGCGCCTCAGCTCTGCAATGTTTTTGCTTCCCGAGTTAGCCGGGCACTATATTACAT
ATCGAAGGCCTTTACCACTGCTTCCTCAAAGTTGGAGAAGATCGGATATGTTGATTCTGAAATCGAGAGTGAAGAAGTAAAACCCGTAAAAGAGACCATTGACTTTAAAG
AAGTAAAGCGAGTCGATCGTATTCTTGCATCCTTACAGCGCAAGCTGCCACCTGCCCCTCCTCCCCCACCATTTCCAGAAGGTTATGTTCCTGCTCCCACTTCAGAAGCA
GAAAAAGGCCCTGAAAACCAGCAAGGAGAGCCGCAGCAACCTCCCGCCGATCCCATTATTGATCAAGGCCCGGCTAAAAGGATGAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
CTCACGCTGTGTCGACTCGTCGTATAACAAAGTAAAGACCAGGGCGGAGATTACGTAAATTCGACGTTTCCTGGCCGGAAAAAGTGAAATCTCAGTCCAATGGCAACTAC
ACCGCCACCGGGGATCGGGAATTTCGAGGGGGCAGCGCCGCCGGCAGCGCCTCAGCCGCCAGGCACGGACATGACCGGAATTTGCTTCAGAGACCAACTCTGGCTCAATA
CTTACCCTCTCGATCGGAACCTGGTGTTCGATTACTTCGCCTTGTCCCCTTTCTACGACTGGACTTGTAACAACGAACAGCTCCGAATGCGCTCCGTTCACCCCCTCGAT
CTCTCTCAACTCACAAAAATGACAGGGATAGAGTATATGCTGAATGAAGTTATGGAGCCTCACCTTTTCGTTTTCCGAAAGCAAAAGAGGGATGGTCCTGAAAAAGTCAC
ACCAATGCTGACTTATTATATCTTAGACGGTTCGATTTACCAGGCGCCTCAGCTCTGCAATGTTTTTGCTTCCCGAGTTAGCCGGGCACTATATTACATATCGAAGGCCT
TTACCACTGCTTCCTCAAAGTTGGAGAAGATCGGATATGTTGATTCTGAAATCGAGAGTGAAGAAGTAAAACCCGTAAAAGAGACCATTGACTTTAAAGAAGTAAAGCGA
GTCGATCGTATTCTTGCATCCTTACAGCGCAAGCTGCCACCTGCCCCTCCTCCCCCACCATTTCCAGAAGGTTATGTTCCTGCTCCCACTTCAGAAGCAGAAAAAGGCCC
TGAAAACCAGCAAGGAGAGCCGCAGCAACCTCCCGCCGATCCCATTATTGATCAAGGCCCGGCTAAAAGGATGAAATTTTGATCAAGAGTTTATGCTATGTTCTTTGTCC
AAGCCGAGAAATATATTTAAACCGGCAATCGAAGTTCGACACGGATGAAATGCCCGCCCTAAGCATTTGTGAGTTTTCACCACCTCCCCCTCTGTGAAAAGCCTTTAATT
ATAGACTTAGTTGGTTAGCTAATGGATTGATTGTTTAAGCAGTAACTTGTACTACATGACTGTCAATATAACCATGACTTCCTGGTTTTGTCAGCTTGAAGTGAATACAC
ATGTACCATTTATTTGCTGTAAGCCTTTACCATTGATGTTGAAACTGGTGGAACTCAGGTTTTGTGTCTGTCACTATTTTGATAACTTTTTAGATGAAGACAAAATGATT
TCAAATTTTGATATTCATAAGTTT
Protein sequenceShow/hide protein sequence
MATTPPPGIGNFEGAAPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLTKMTGIEYMLNEVMEPHLFVFRKQKRDGP
EKVTPMLTYYILDGSIYQAPQLCNVFASRVSRALYYISKAFTTASSKLEKIGYVDSEIESEEVKPVKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAPTSEA
EKGPENQQGEPQQPPADPIIDQGPAKRMKF