; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025847 (gene) of Chayote v1 genome

Gene IDSed0025847
OrganismSechium edule (Chayote v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG13:26556376..26558684
RNA-Seq ExpressionSed0025847
SyntenySed0025847
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7138490.1 hypothetical protein RHSIM_Rhsim07G0255600 [Rhododendron simsii]1.3e-4038.83Show/hide
Query:  EVFVEHEIDSG-----LSDDGNFNLDPFYGFKNDCYMNDFEEEECIFLTSKDMNQGDVGTSRILLEDADIGIDLDIDSEELQSLGDSSDSDQVCNNKMRF
        E+ ++ E+ +G      SD     LD  Y   +D   +D+++      T K+    +  T    L D+D  +D   ++       D + +D V    +RF
Subjt:  EVFVEHEIDSG-----LSDDGNFNLDPFYGFKNDCYMNDFEEEECIFLTSKDMNQGDVGTSRILLEDADIGIDLDIDSEELQSLGDSSDSDQVCNNKMRF

Query:  PSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLTSSWL
         +FK      ++  F  GMLF+SL +FK  ++ Y V GG+GI+F KND+ RVRA C + C +    SKV  QETFQLKTC  EH C+R +KN RL+S +L
Subjt:  PSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLTSSWL

Query:  GKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVK-LNISEEEEEDGGE
          +L  +VKD P ++L+ IQ+KV  +++ QIS+ KAYRAKR ALD V GS+ +QY+ LW+Y  EL+ SNP ST +++ L+ + ++ + GGE
Subjt:  GKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVK-LNISEEEEEDGGE

KAF7153765.1 hypothetical protein RHSIM_Rhsim01G0020300 [Rhododendron simsii]2.2e-4050.56Show/hide
Query:  FEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKC--VNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLTSSWLGKQLENEVKDHP
        FE GM+F SL +FK+ V  Y + GG+GI+F KNDK RVRA C     C +    SKV  Q TFQ+KTCV EH C+R +KN RL S +L  +L N+VKD P
Subjt:  FEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKC--VNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLTSSWLGKQLENEVKDHP

Query:  EMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVKLNISEEEEEDGGEPV
         +KL+ IQ++VQ++Y+  IS+ KAYRAKR A+DKV GS+A+QY+ LW+Y  ELR SN  ST  +K++++   E D    +
Subjt:  EMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVKLNISEEEEEDGGEPV

KAG5541483.1 hypothetical protein RHGRI_021341 [Rhododendron griersonianum]1.4e-4241.4Show/hide
Query:  EVFVEHEIDSGLSDDGNFNLDPFYGFKNDCY-MNDFEEEECIFLTSKDMNQGDVGTSRILLEDADIGIDLDIDSEELQSLGDSSDSDQVCNNKMRFP--S
        +V V  E D  L DD  F+    +G   +    +DF+  + ++ +  +     V   +        GI  D +SEEL S   SS+S+   N   R P  +
Subjt:  EVFVEHEIDSGLSDDGNFNLDPFYGFKNDCY-MNDFEEEECIFLTSKDMNQGDVGTSRILLEDADIGIDLDIDSEELQSLGDSSDSDQVCNNKMRFP--S

Query:  FKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKC--VNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLTSSWL
          + +       F+ GM+F SL +FK+ V  Y V GG+GI+F KNDK RVRA C     C +    SKV  Q TFQ+KTCV EH C+R +KN RL S +L
Subjt:  FKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKC--VNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLTSSWL

Query:  GKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVKLNISEEEE
          +L N+VKD P +KL+ IQ++VQ++Y+  IS+ KAYRAKR ALDKV GS+A+QY+ LW+Y  ELR SN  ST  +K+N++   E
Subjt:  GKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVKLNISEEEE

XP_022153708.1 uncharacterized protein LOC111021158 [Momordica charantia]3.8e-6448.49Show/hide
Query:  MPFEVFVEHEI-DSGLSDDGNFNLDPFYGFKNDCYMNDFEEEECIFLTSKDMNQGDVGTSRIL-----LEDADIGIDLDIDSEELQSLGDSSDSDQVCNN
        M FE++VEHE  D  +  D + +  P+       + +D +    I++  KD+       S I+     +E+ D G   DIDS EL SL DSSDS+   + 
Subjt:  MPFEVFVEHEI-DSGLSDDGNFNLDPFYGFKNDCYMNDFEEEECIFLTSKDMNQGDVGTSRIL-----LEDADIGIDLDIDSEELQSLGDSSDSDQVCNN

Query:  KMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLT
        ++++P +++   +     FE+GM FNSL EFK+VV+ Y VKGGW IRFVKNDK RVRAKCV+ CKW+A+ +KVQG+ T+QLKT V EH+CSR F NP LT
Subjt:  KMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLT

Query:  SSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVKLNISEEEEEDGGEPVGRI
        S WL +Q+ N+VK+ P+++L +IQ+KVQR+YISQI+K KA+RAK+LALD V GS+ +Q S LWEY  E+  SNP S+A++ L++ +E+EE  G+P+GRI
Subjt:  SSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVKLNISEEEEEDGGEPVGRI

XP_023914573.1 uncharacterized protein LOC112026126 [Quercus suber]5.0e-4044.8Show/hide
Query:  DIDSEELQSL----------GDSSDSD----QVCNN--KMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVN
        D +SEEL SL           DSSD D    +V N+  K ++P F+  + +     FE  MLF S  +FKD +  Y V GGWGI+FVKND +RVRA+C  
Subjt:  DIDSEELQSL----------GDSSDSD----QVCNN--KMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVN

Query:  RCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLTSSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQL
         C +VA+ +KV  +++F+LKT   EHTCSR +KNPR T+S++GK+L   V+  P++KL  IQ  V  +Y+  IS GKA RA+  A D V G++  Q++QL
Subjt:  RCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLTSSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQL

Query:  WEYSEELRISNPSSTAIVKLN
        WEY +ELR  +P ST ++K++
Subjt:  WEYSEELRISNPSSTAIVKLN

TrEMBL top hitse value%identityAlignment
A0A2N9ES33 Uncharacterized protein1.4e-4849.31Show/hide
Query:  DIDSEELQSLGDSSDSDQVCNNKMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQET
        +++ E    +  S+   +V + +  FP F+       +  FE+GMLF S  +FK+ +  Y V+GGWGIRFVKNDK+RVRA C   CK+VA+ +K+  + T
Subjt:  DIDSEELQSLGDSSDSDQVCNNKMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQET

Query:  FQLKTCVNEHTCSRCFKNPRLTSSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTA
        FQLKT   EH+CSRCFKNPR+T+ +L K+L   VKD P++KL SIQKKV R+Y++ IS+ KAYRAK  A+D + GS+ +QY+ LW+Y EELR SNP ST 
Subjt:  FQLKTCVNEHTCSRCFKNPRLTSSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTA

Query:  IVKL---NISEEEEEDG
        ++K+   N  E E EDG
Subjt:  IVKL---NISEEEEEDG

A0A2N9GPL9 Uncharacterized protein4.5e-4738.63Show/hide
Query:  EVFVEHEID--------SGLSDDGNFNLDPFYGFKNDCYMN-DFEEEECIFLTSKDMNQGDVGTSRILLEDADIGIDLDIDS----EELQSLGDSSDSD-
        +VFVEH ++          + DD N ++D  +    D  ++ D ++++ ++    DM   +V        DAD   D   DS     E +S G++++ D 
Subjt:  EVFVEHEID--------SGLSDDGNFNLDPFYGFKNDCYMN-DFEEEECIFLTSKDMNQGDVGTSRILLEDADIGIDLDIDS----EELQSLGDSSDSD-

Query:  ---------------QVCNNKMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQETFQ
                       +V + +  FP F+       +  FE G+LF S  +FK+ +  Y V+GGWGI+FVKNDK+RVRA C   CK+VA+ +K+  + TFQ
Subjt:  ---------------QVCNNKMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQETFQ

Query:  LKTCVNEHTCSRCFKNPRLTSSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIV
        LKT   +H+C+RC+KNPR+T+ +L K+L   VKD P++KL SIQKKV ++Y++ IS+ KAYRAK  A+D + GS+ +QY+ LW+Y EELR SNP ST ++
Subjt:  LKTCVNEHTCSRCFKNPRLTSSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIV

Query:  KLNISEEEEEDGGEPVGRIRE
        K+  S  E E   E V +IR+
Subjt:  KLNISEEEEEDGGEPVGRIRE

A0A2N9H0G1 Uncharacterized protein1.1e-4844.76Show/hide
Query:  SKDMNQGDVGTSRILLEDADIGIDLDIDSEELQSLGDSSDSDQVCNNKMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDK
        S+D+     G +    E     ++++ +++   S G      +V + +  FP F+       +  FE+GMLF S  +FK+ +  Y V+GGWGIRFVKNDK
Subjt:  SKDMNQGDVGTSRILLEDADIGIDLDIDSEELQSLGDSSDSDQVCNNKMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDK

Query:  IRVRAKCVNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLTSSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIG
        +RVRA C   CK+VA+ +K+  + TFQLKT   EH+CSRCFKNPR+T+ +L K+L   VKD P++KL SIQKKV+++Y++ IS+ KAYRAK  A+D + G
Subjt:  IRVRAKCVNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLTSSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIG

Query:  SYAKQYSQLWEYSEELRISNPSSTAIVKLNISEEEEEDGGEPVGRIRE
        S+ +QY+ LW+Y EELR SNP ST ++K+  S  E E   E V +IR+
Subjt:  SYAKQYSQLWEYSEELRISNPSSTAIVKLNISEEEEEDGGEPVGRIRE

A0A2N9HKG1 SWIM-type domain-containing protein5.2e-5142.05Show/hide
Query:  EVFVEHEID--------SGLSDDGNFNLDPFYGFKNDCYMN---DFEEEECIFLTSKDMNQGDV-----GTSRILLEDADIGIDLDIDSEELQSLGDSSD
        EVFVEH ++          + DD N N+D  +  + D  ++   D ++++ ++    DM   ++       S     DAD  ++ + D E   S G    
Subjt:  EVFVEHEID--------SGLSDDGNFNLDPFYGFKNDCYMN---DFEEEECIFLTSKDMNQGDV-----GTSRILLEDADIGIDLDIDSEELQSLGDSSD

Query:  SDQVCNNKMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQETFQLKTCVNEHTCSRC
          +V + +  FP F+       +  FE+GMLF S  +FK+ +  Y V+GGWGIRFVKNDK+RVRA C   CK+VA+ +K+  + TFQLKT   EH+CSRC
Subjt:  SDQVCNNKMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQETFQLKTCVNEHTCSRC

Query:  FKNPRLTSSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVKL---NISEEEEE
        FKNPR+T+ +L K+L   VKD P++KL SIQKKV ++Y++ IS+ KAYRAK  A+D + GS+ +QY+ LW+Y EELR SNP ST ++K+   N  E E E
Subjt:  FKNPRLTSSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVKL---NISEEEEE

Query:  DG
        DG
Subjt:  DG

A0A6J1DI69 uncharacterized protein LOC1110211581.8e-6448.49Show/hide
Query:  MPFEVFVEHEI-DSGLSDDGNFNLDPFYGFKNDCYMNDFEEEECIFLTSKDMNQGDVGTSRIL-----LEDADIGIDLDIDSEELQSLGDSSDSDQVCNN
        M FE++VEHE  D  +  D + +  P+       + +D +    I++  KD+       S I+     +E+ D G   DIDS EL SL DSSDS+   + 
Subjt:  MPFEVFVEHEI-DSGLSDDGNFNLDPFYGFKNDCYMNDFEEEECIFLTSKDMNQGDVGTSRIL-----LEDADIGIDLDIDSEELQSLGDSSDSDQVCNN

Query:  KMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLT
        ++++P +++   +     FE+GM FNSL EFK+VV+ Y VKGGW IRFVKNDK RVRAKCV+ CKW+A+ +KVQG+ T+QLKT V EH+CSR F NP LT
Subjt:  KMRFPSFKKNIHENSMTNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLT

Query:  SSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVKLNISEEEEEDGGEPVGRI
        S WL +Q+ N+VK+ P+++L +IQ+KVQR+YISQI+K KA+RAK+LALD V GS+ +Q S LWEY  E+  SNP S+A++ L++ +E+EE  G+P+GRI
Subjt:  SSWLGKQLENEVKDHPEMKLTSIQKKVQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVKLNISEEEEEDGGEPVGRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTCGAAGTATTTGTGGAGCACGAAATAGATAGTGGCTTATCTGATGATGGTAATTTTAATTTAGATCCTTTTTATGGGTTTAAAAATGACTGTTATATGAATGA
TTTTGAAGAAGAAGAATGCATATTCTTAACATCCAAAGATATGAATCAAGGAGATGTTGGAACAAGTAGAATTTTATTAGAGGACGCAGATATTGGAATTGATTTAGACA
TAGACTCTGAAGAACTGCAGTCATTGGGTGATTCATCTGATTCAGACCAAGTATGTAACAATAAGATGAGGTTTCCATCTTTCAAGAAAAACATACATGAAAATAGCATG
ACCAACTTTGAAATTGGTATGCTATTTAATTCTTTGATTGAGTTTAAGGATGTTGTGAATACATATGTTGTCAAAGGAGGATGGGGAATTCGTTTTGTTAAAAATGATAA
GATTAGAGTTCGAGCCAAATGTGTAAACCGTTGTAAGTGGGTAGCATTTGCATCCAAAGTTCAAGGACAAGAGACATTTCAGCTGAAAACATGTGTGAATGAACATACAT
GTAGTAGATGTTTTAAAAATCCTCGATTAACATCTTCTTGGTTAGGCAAGCAATTAGAAAATGAAGTTAAGGACCATCCTGAAATGAAACTAACTTCCATTCAAAAAAAG
GTACAACGTGAGTATATTTCACAAATTTCTAAGGGTAAAGCTTATAGAGCCAAACGTCTTGCATTAGATAAGGTTATTGGTTCATATGCTAAACAATACAGCCAATTATG
GGAGTATAGTGAGGAATTGCGTATTTCGAATCCTAGTAGTACTGCAATTGTGAAATTGAACATATCTGAGGAGGAAGAAGAGGATGGTGGAGAACCTGTTGGAAGGATTA
GGGAAACACATCAACCCAACAATCGGGTTCAAATGATCATTAGAAGTGACCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCATTCGAAGTATTTGTGGAGCACGAAATAGATAGTGGCTTATCTGATGATGGTAATTTTAATTTAGATCCTTTTTATGGGTTTAAAAATGACTGTTATATGAATGA
TTTTGAAGAAGAAGAATGCATATTCTTAACATCCAAAGATATGAATCAAGGAGATGTTGGAACAAGTAGAATTTTATTAGAGGACGCAGATATTGGAATTGATTTAGACA
TAGACTCTGAAGAACTGCAGTCATTGGGTGATTCATCTGATTCAGACCAAGTATGTAACAATAAGATGAGGTTTCCATCTTTCAAGAAAAACATACATGAAAATAGCATG
ACCAACTTTGAAATTGGTATGCTATTTAATTCTTTGATTGAGTTTAAGGATGTTGTGAATACATATGTTGTCAAAGGAGGATGGGGAATTCGTTTTGTTAAAAATGATAA
GATTAGAGTTCGAGCCAAATGTGTAAACCGTTGTAAGTGGGTAGCATTTGCATCCAAAGTTCAAGGACAAGAGACATTTCAGCTGAAAACATGTGTGAATGAACATACAT
GTAGTAGATGTTTTAAAAATCCTCGATTAACATCTTCTTGGTTAGGCAAGCAATTAGAAAATGAAGTTAAGGACCATCCTGAAATGAAACTAACTTCCATTCAAAAAAAG
GTACAACGTGAGTATATTTCACAAATTTCTAAGGGTAAAGCTTATAGAGCCAAACGTCTTGCATTAGATAAGGTTATTGGTTCATATGCTAAACAATACAGCCAATTATG
GGAGTATAGTGAGGAATTGCGTATTTCGAATCCTAGTAGTACTGCAATTGTGAAATTGAACATATCTGAGGAGGAAGAAGAGGATGGTGGAGAACCTGTTGGAAGGATTA
GGGAAACACATCAACCCAACAATCGGGTTCAAATGATCATTAGAAGTGACCGATGA
Protein sequenceShow/hide protein sequence
MPFEVFVEHEIDSGLSDDGNFNLDPFYGFKNDCYMNDFEEEECIFLTSKDMNQGDVGTSRILLEDADIGIDLDIDSEELQSLGDSSDSDQVCNNKMRFPSFKKNIHENSM
TNFEIGMLFNSLIEFKDVVNTYVVKGGWGIRFVKNDKIRVRAKCVNRCKWVAFASKVQGQETFQLKTCVNEHTCSRCFKNPRLTSSWLGKQLENEVKDHPEMKLTSIQKK
VQREYISQISKGKAYRAKRLALDKVIGSYAKQYSQLWEYSEELRISNPSSTAIVKLNISEEEEEDGGEPVGRIRETHQPNNRVQMIIRSDR