; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025854 (gene) of Chayote v1 genome

Gene IDSed0025854
OrganismSechium edule (Chayote v1)
Descriptioncold shock protein 2-like
Genome locationLG01:54530914..54531990
RNA-Seq ExpressionSed0025854
SyntenySed0025854
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR002059 - Cold-shock protein, DNA-binding
IPR011129 - Cold shock domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR019844 - Cold-shock (CSD) domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465791.1 PREDICTED: cold shock protein 2-like [Cucumis melo]6.4e-6476.63Show/hide
Query:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGG
        MAE+KRSSG VRWFSAQKGFGFIAPDDA +DLFVHQTSIRSEGFRTLFD Q VEF IDYD DQR KA+DVTVID S     GRG G  RG +YGRF GGG
Subjt:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGG

Query:  GRGFDRGGRYDGPS--GGFGGGKCYNCGHMGHLARDCYRGPARG-RGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS
        GRGF RG  YDGPS  GG GGG+CYNCG MGHLARDCYRG      GRRY GGRGYGG    GG GCYNCGDTGHFARDCQN+S
Subjt:  GRGFDRGGRYDGPS--GGFGGGKCYNCGHMGHLARDCYRGPARG-RGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS

XP_022938383.1 cold shock protein 2-like [Cucurbita moschata]8.1e-6774.11Show/hide
Query:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGG-
        MAE+KRSSG VRWFSAQKGFGFIAPDDA +DLFVHQTSI+SEGFRTLFD QAVEFAIDYD+DQR KA+DVTV   S+G   GRG    RG  YGRFGG  
Subjt:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGG-

Query:  --GGRGFDR-GGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRG-----PARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS
          GGRGF R GGRYDGPSGGF       GGG+CYNCG MGHLARDCYRG     P+RG GR YGGGRGYGG    GG GCYNCGDTGHFARDCQN+S
Subjt:  --GGRGFDR-GGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRG-----PARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS

XP_022993723.1 cold shock protein 2-like [Cucurbita maxima]1.2e-6574.11Show/hide
Query:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGG-
        MAE+KRSSG VRWFSAQKGFGFIAPDDA +DLFVHQTSI+SEGFRTLFD QAVEFAIDYD+DQR KA+DVTV   S+G   GRG    RG  YGRFGG  
Subjt:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGG-

Query:  --GGRGFDR-GGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRG-----PARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS
          GGRGF R GGRYDGPSGGF       GGG+CYNCG MGHLARDCYRG     P+RG GR YGGGRGYGG    GG GCYNCGDTGHFARDCQN+S
Subjt:  --GGRGFDR-GGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRG-----PARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS

XP_023549669.1 glycine-rich protein 2-like [Cucurbita pepo subsp. pepo]5.2e-6673.37Show/hide
Query:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFG---
        MAE+KRSSG VRWFSAQKGFGFIAPDDA +DLFVHQTSI+SEGFRTLFD QAVEF+IDYD+DQR KA+DVTV   S+G   GRG    RG  YGRFG   
Subjt:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFG---

Query:  --GGGGRGFDR-GGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRG-----PARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS
          GGGGRGF R GGRYDGPSGGF       GGG+CYNCG MGHLARDCYRG     P+RG GR YGGGRGYGG    GG GCYNCGDTGHFARDCQN+S
Subjt:  --GGGGRGFDR-GGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRG-----PARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS

XP_038906549.1 glycine-rich protein 2-like [Benincasa hispida]6.8e-6676.19Show/hide
Query:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGG
        MAE+KRSSG VRWFSAQKGFGFIAPDDA EDLFVHQTSIRSEGFRTLFD QAVEF IDYD+DQR KA+DVTVI  S G   GRG G  RG AYGRF GGG
Subjt:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGG

Query:  GRGFDRGGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRGPARG-RGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS
        GRGF RGGRY+  SGGF       GGG+CYNCG MGHLARDCYRG      GR YGGGRGYGG     GGGCYNCGDTGHFARDCQN+S
Subjt:  GRGFDRGGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRGPARG-RGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS

TrEMBL top hitse value%identityAlignment
A0A1S3CPN9 cold shock protein 2-like3.1e-6476.63Show/hide
Query:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGG
        MAE+KRSSG VRWFSAQKGFGFIAPDDA +DLFVHQTSIRSEGFRTLFD Q VEF IDYD DQR KA+DVTVID S     GRG G  RG +YGRF GGG
Subjt:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGG

Query:  GRGFDRGGRYDGPS--GGFGGGKCYNCGHMGHLARDCYRGPARG-RGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS
        GRGF RG  YDGPS  GG GGG+CYNCG MGHLARDCYRG      GRRY GGRGYGG    GG GCYNCGDTGHFARDCQN+S
Subjt:  GRGFDRGGRYDGPS--GGFGGGKCYNCGHMGHLARDCYRGPARG-RGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS

A0A5A7TX13 Cold shock protein 2-like3.1e-6476.63Show/hide
Query:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGG
        MAE+KRSSG VRWFSAQKGFGFIAPDDA +DLFVHQTSIRSEGFRTLFD Q VEF IDYD DQR KA+DVTVID S     GRG G  RG +YGRF GGG
Subjt:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGG

Query:  GRGFDRGGRYDGPS--GGFGGGKCYNCGHMGHLARDCYRGPARG-RGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS
        GRGF RG  YDGPS  GG GGG+CYNCG MGHLARDCYRG      GRRY GGRGYGG    GG GCYNCGDTGHFARDCQN+S
Subjt:  GRGFDRGGRYDGPS--GGFGGGKCYNCGHMGHLARDCYRGPARG-RGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS

A0A6J1CIH7 glycine-rich protein 2-like3.4e-6369.8Show/hide
Query:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGH--AYGRF--
        MAE+ RSSG VRWFSAQKGFGFIAPDDA +DLFVHQTSIRSEGFRTLFD QAVE++IDYD+DQR KA+DVTVI  S+    GRG G  RG    YGRF  
Subjt:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGH--AYGRF--

Query:  ----GGGGGRGFDRGGRYDGPSGGF-----GGGKCYNCGHMGHLARDCYRG-------PARGRGRRYGGGRGYGGDRNSGG-GGCYNCGDTGHFARDCQN
            GGGGGRGF RGGRYDGPSGGF     GGG+CYNCG +GHLARDCYRG       P RG  RRYGGGR YGG    GG GGC+NCGD GHFAR+C N
Subjt:  ----GGGGGRGFDRGGRYDGPSGGF-----GGGKCYNCGHMGHLARDCYRG-------PARGRGRRYGGGRGYGGDRNSGG-GGCYNCGDTGHFARDCQN

Query:  QS
        +S
Subjt:  QS

A0A6J1FIQ9 cold shock protein 2-like3.9e-6774.11Show/hide
Query:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGG-
        MAE+KRSSG VRWFSAQKGFGFIAPDDA +DLFVHQTSI+SEGFRTLFD QAVEFAIDYD+DQR KA+DVTV   S+G   GRG    RG  YGRFGG  
Subjt:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGG-

Query:  --GGRGFDR-GGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRG-----PARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS
          GGRGF R GGRYDGPSGGF       GGG+CYNCG MGHLARDCYRG     P+RG GR YGGGRGYGG    GG GCYNCGDTGHFARDCQN+S
Subjt:  --GGRGFDR-GGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRG-----PARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS

A0A6J1K351 cold shock protein 2-like5.6e-6674.11Show/hide
Query:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGG-
        MAE+KRSSG VRWFSAQKGFGFIAPDDA +DLFVHQTSI+SEGFRTLFD QAVEFAIDYD+DQR KA+DVTV   S+G   GRG    RG  YGRFGG  
Subjt:  MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGG-

Query:  --GGRGFDR-GGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRG-----PARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS
          GGRGF R GGRYDGPSGGF       GGG+CYNCG MGHLARDCYRG     P+RG GR YGGGRGYGG    GG GCYNCGDTGHFARDCQN+S
Subjt:  --GGRGFDR-GGRYDGPSGGF-------GGGKCYNCGHMGHLARDCYRG-----PARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS

SwissProt top hitse value%identityAlignment
O65639 Cold shock protein 11.3e-2745.35Show/hide
Query:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGFD
        RS+G V WF+A KG+GFI PDD   +LFVHQ+SI SEG+R+L    AVEFAI    D + KA++VT                          GGG    +
Subjt:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGFD

Query:  RGGRYDGPSGGFGGGKCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDC
           R +G   G GG  CYNCG +GH+++DC            GGG G G  R+ GG GCYNCGDTGHFARDC
Subjt:  RGGRYDGPSGGFGGGKCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDC

P27484 Glycine-rich protein 26.9e-3746.63Show/hide
Query:  KRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSA-----------------------GVRA
        +R+ G V+WFS QKGFGFI PDD GEDLFVHQ+ IRSEGFR+L + + VEF ++   D R KA+DVT  DG+A                       G   
Subjt:  KRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSA-----------------------GVRA

Query:  GRGAGSARGHAYGRFGGGGGRGFDRGGRYDGPSGGFGGG------------KCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGGCYNCGD
        G G G +RG+  G  G GGG G+  G RY G  GG+GGG             C+ CG  GH ARDC +    G G R+GGG G G     GGGGCY CG+
Subjt:  GRGAGSARGHAYGRFGGGGGRGFDRGGRYDGPSGGFGGG------------KCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGGCYNCGD

Query:  TGHFARDC
         GHFAR+C
Subjt:  TGHFARDC

Q38896 Cold shock domain-containing protein 45.0e-3552.72Show/hide
Query:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGFD
        R  G V+WF  QKGFGFI P D G+DLFVHQ+SIRSEGFR+L  +++VEF ++ D+  RPKAI+V+  DG A V+   G G + G   G FGGGGGRG  
Subjt:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGFD

Query:  R-GGRYDG-----PSGGFGGG----KCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGG--CYNCGDTGHFARDC
        R GG Y G      SGG GGG     C+ CG  GH+AR+C +G     G   GG  G GG    GGGG  CY+CG++GHFARDC
Subjt:  R-GGRYDG-----PSGGFGGG----KCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGG--CYNCGDTGHFARDC

Q41188 Cold shock protein 23.3e-3953.37Show/hide
Query:  KRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGF
        +R  G V+WF  QKGFGFI PDD G+DLFVHQ+SIRSEGFR+L  ++AVEF ++ D++ RPKAIDV+  DG A V+   G GS+ G   G FGGG G G 
Subjt:  KRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGF

Query:  DRGGRYDGPSGGF--------GGGKCYNCGHMGHLARDCYRGPA--RGRGRRYGGGRGY--------GGDRNSGGGG--CYNCGDTGHFARDC
          GG Y G  GG+        GG  CY CG  GH+ARDC  G     G G  YGGG GY        GG R  GGGG  CY+CG++GHFARDC
Subjt:  DRGGRYDGPSGGF--------GGGKCYNCGHMGHLARDCYRGPA--RGRGRRYGGGRGY--------GGDRNSGGGG--CYNCGDTGHFARDC

Q94C69 Cold shock domain-containing protein 36.5e-2745.24Show/hide
Query:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSA---GVRAGRGAG--------------SA
        RS G V WFS  KG+GFI PDD GE+LFVHQ+SI S+GFR+L   ++VE+ I    D + KAI+VT   G +      + RG+G                
Subjt:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSA---GVRAGRGAG--------------SA

Query:  RGHAYGR-FGGGGGR---------------GFDRGGRYD--GPSGGFGGG--KCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGGCYNCG
         G + G+ FGGGGGR                F R  R    G SGG GGG   CY+CG +GHLA+DC  G     G RYGG    GG R SGG GCY CG
Subjt:  RGHAYGR-FGGGGGR---------------GFDRGGRYD--GPSGGFGGG--KCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGGCYNCG

Query:  DTGHFARDCQ
          GHFARDC+
Subjt:  DTGHFARDCQ

Arabidopsis top hitse value%identityAlignment
AT2G17870.1 cold shock domain protein 34.6e-2845.24Show/hide
Query:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSA---GVRAGRGAG--------------SA
        RS G V WFS  KG+GFI PDD GE+LFVHQ+SI S+GFR+L   ++VE+ I    D + KAI+VT   G +      + RG+G                
Subjt:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSA---GVRAGRGAG--------------SA

Query:  RGHAYGR-FGGGGGR---------------GFDRGGRYD--GPSGGFGGG--KCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGGCYNCG
         G + G+ FGGGGGR                F R  R    G SGG GGG   CY+CG +GHLA+DC  G     G RYGG    GG R SGG GCY CG
Subjt:  RGHAYGR-FGGGGGR---------------GFDRGGRYD--GPSGGFGGG--KCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGGCYNCG

Query:  DTGHFARDCQ
          GHFARDC+
Subjt:  DTGHFARDCQ

AT2G21060.1 glycine-rich protein 2B3.5e-3652.72Show/hide
Query:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGFD
        R  G V+WF  QKGFGFI P D G+DLFVHQ+SIRSEGFR+L  +++VEF ++ D+  RPKAI+V+  DG A V+   G G + G   G FGGGGGRG  
Subjt:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGFD

Query:  R-GGRYDG-----PSGGFGGG----KCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGG--CYNCGDTGHFARDC
        R GG Y G      SGG GGG     C+ CG  GH+AR+C +G     G   GG  G GG    GGGG  CY+CG++GHFARDC
Subjt:  R-GGRYDG-----PSGGFGGG----KCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGG--CYNCGDTGHFARDC

AT4G36020.1 cold shock domain protein 19.3e-2945.35Show/hide
Query:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGFD
        RS+G V WF+A KG+GFI PDD   +LFVHQ+SI SEG+R+L    AVEFAI    D + KA++VT                          GGG    +
Subjt:  RSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGFD

Query:  RGGRYDGPSGGFGGGKCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDC
           R +G   G GG  CYNCG +GH+++DC            GGG G G  R+ GG GCYNCGDTGHFARDC
Subjt:  RGGRYDGPSGGFGGGKCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDC

AT4G38680.1 glycine rich protein 22.4e-4053.37Show/hide
Query:  KRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGF
        +R  G V+WF  QKGFGFI PDD G+DLFVHQ+SIRSEGFR+L  ++AVEF ++ D++ RPKAIDV+  DG A V+   G GS+ G   G FGGG G G 
Subjt:  KRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGF

Query:  DRGGRYDGPSGGF--------GGGKCYNCGHMGHLARDCYRGPA--RGRGRRYGGGRGY--------GGDRNSGGGG--CYNCGDTGHFARDC
          GG Y G  GG+        GG  CY CG  GH+ARDC  G     G G  YGGG GY        GG R  GGGG  CY+CG++GHFARDC
Subjt:  DRGGRYDGPSGGF--------GGGKCYNCGHMGHLARDCYRGPA--RGRGRRYGGGRGY--------GGDRNSGGGG--CYNCGDTGHFARDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGCTCAAGAGATCGAGCGGCATTGTCCGGTGGTTTAGTGCCCAAAAGGGCTTTGGCTTCATAGCTCCTGACGATGCCGGCGAAGATCTTTTTGTTCACCAGAC
TTCCATTCGCTCCGAAGGATTTCGGACCCTTTTCGATGATCAGGCCGTTGAGTTTGCTATCGACTACGACGACGATCAACGCCCTAAGGCCATTGATGTCACTGTGATTG
ATGGATCTGCCGGGGTTAGAGCTGGCCGTGGGGCTGGGAGTGCTAGAGGCCACGCTTATGGGAGGTTCGGCGGCGGTGGAGGCCGTGGTTTCGACAGAGGAGGGCGCTAC
GATGGTCCAAGCGGTGGATTCGGTGGTGGCAAGTGCTACAATTGTGGTCACATGGGTCATTTGGCGAGGGATTGTTATCGGGGTCCCGCACGTGGAAGGGGTCGTAGATA
TGGCGGTGGTCGAGGATACGGCGGTGATCGAAACAGCGGTGGTGGCGGTTGTTATAATTGTGGAGATACAGGACATTTTGCTCGAGACTGTCAAAACCAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
GGCCAAGAACCGCCCAATCCGTGTGTCCCACGTCACCCACGAATCTCTCTCTTTCACGCCGATATCCTCCACTTCCCACTTGCAGGAAAAAACTGAATCAATACTCGGAA
AGCTCAACTGTCCACCATTGGTTCCTTCTCTGGATGCCTAGCCACCTTAATCCACTTAATAATATACCTTCATCCGAGCCTTTCTCTTATTCTTTCTTATTTTCCGAGTT
TCCATGGCTGAGCTCAAGAGATCGAGCGGCATTGTCCGGTGGTTTAGTGCCCAAAAGGGCTTTGGCTTCATAGCTCCTGACGATGCCGGCGAAGATCTTTTTGTTCACCA
GACTTCCATTCGCTCCGAAGGATTTCGGACCCTTTTCGATGATCAGGCCGTTGAGTTTGCTATCGACTACGACGACGATCAACGCCCTAAGGCCATTGATGTCACTGTGA
TTGATGGATCTGCCGGGGTTAGAGCTGGCCGTGGGGCTGGGAGTGCTAGAGGCCACGCTTATGGGAGGTTCGGCGGCGGTGGAGGCCGTGGTTTCGACAGAGGAGGGCGC
TACGATGGTCCAAGCGGTGGATTCGGTGGTGGCAAGTGCTACAATTGTGGTCACATGGGTCATTTGGCGAGGGATTGTTATCGGGGTCCCGCACGTGGAAGGGGTCGTAG
ATATGGCGGTGGTCGAGGATACGGCGGTGATCGAAACAGCGGTGGTGGCGGTTGTTATAATTGTGGAGATACAGGACATTTTGCTCGAGACTGTCAAAACCAAAGCTAAT
GTTGAACAATGTTGGTTCTTCCTTTTAAGTGCTATTCATACTTTTTTCTGAAATTAATTTGGTTGGGGTGTTAATTTTTTTGGTTTGAATTTCTCGATTTAAAAGTTTGT
CCAGTGACTCCAAGTCTGCAATTGAGAGCAAGGTGAACCGAGAAATGAAACCATAAAGCTTCAATTGATCATTGTTTCTCCCTTGTTGATGATGGAAGAAATTGTTTGTA
TATGCTATACCTAAGTGGCATTGTTTCTAATTCATTCTCCTCTTGATTGTTGTGAGATTATTAACATGTCAAGAGTATATATGTTCA
Protein sequenceShow/hide protein sequence
MAELKRSSGIVRWFSAQKGFGFIAPDDAGEDLFVHQTSIRSEGFRTLFDDQAVEFAIDYDDDQRPKAIDVTVIDGSAGVRAGRGAGSARGHAYGRFGGGGGRGFDRGGRY
DGPSGGFGGGKCYNCGHMGHLARDCYRGPARGRGRRYGGGRGYGGDRNSGGGGCYNCGDTGHFARDCQNQS