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Sed0025864 (gene) of Chayote v1 genome

Gene IDSed0025864
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG13:24329487..24330620
RNA-Seq ExpressionSed0025864
SyntenySed0025864
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037665.1 hypothetical protein SDJN02_01295, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-1586.27Show/hide
Query:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN++ VDS PWILDLVPFIVV+LIAAHVLAL YWIYRLATDNR QRRKAH
Subjt:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
XP_008453078.1 PREDICTED: uncharacterized protein LOC103493902 [Cucumis melo]3.4e-1584.31Show/hide
Query:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN++ VDS PWILD+VPFIVV+LI AHVLALVYWIYRL TDNRPQRRKAH
Subjt:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
XP_022935881.1 uncharacterized protein LOC111442654 [Cucurbita moschata]3.1e-1688.24Show/hide
Query:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN++ VDS PWILD+VPFIVV+LIAAHVLALVYWIYRLATDNRPQRRKAH
Subjt:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
XP_022977153.1 uncharacterized protein LOC111477303 [Cucurbita maxima]2.6e-1584.31Show/hide
Query:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN++ VDS PWILD+VPFIV +LIAAHVLALVYWIYRLAT+NRPQRRKAH
Subjt:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
XP_023535177.1 uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo]5.3e-1688.24Show/hide
Query:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN++ VDS PWILD VPFIVV+LIAAHVLALVYWIYRLATDNRPQRRKAH
Subjt:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
TrEMBL top hitse value%identityAlignment
A0A0A0L5I3 Uncharacterized protein2.2e-1584.31Show/hide
Query:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN+  VDS PWILD+VPFIVV+LI AHVLALVYWIYRL TDNRPQRRKAH
Subjt:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
A0A1S3BWH4 uncharacterized protein LOC1034939021.7e-1584.31Show/hide
Query:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN++ VDS PWILD+VPFIVV+LI AHVLALVYWIYRL TDNRPQRRKAH
Subjt:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
A0A2P5DIT2 Transmembrane protein1.5e-1170.59Show/hide
Query:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN +L  + PW+LD+VP IVV+LIA HV ALVYWIYRLAT+ +PQRRKAH
Subjt:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
A0A6J1F6U7 uncharacterized protein LOC1114426541.5e-1688.24Show/hide
Query:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN++ VDS PWILD+VPFIVV+LIAAHVLALVYWIYRLATDNRPQRRKAH
Subjt:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
A0A6J1IQM9 uncharacterized protein LOC1114773031.3e-1584.31Show/hide
Query:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN++ VDS PWILD+VPFIV +LIAAHVLALVYWIYRLAT+NRPQRRKAH
Subjt:  MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G10745.1 unknown protein5.1e-0969.23Show/hide
Query:  PWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRK
        PW LDLVP +VV+L AAHV+AL YWIYRLATD R Q ++
Subjt:  PWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRK
AT5G24980.1 unknown protein2.2e-0769.44Show/hide
Query:  LDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRK
        +DLVP +VV L A HV+ALVYWIYRLA+D  PQR+K
Subjt:  LDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACCGGAAACTGGTTGATTCAACGCCATGGATTCTCGATCTCGTGCCTTTCATCGTCGTTGTTCTAATCGCCGCTCACGTTCTCGCTCTGGTTTACTGGATTTA
CCGATTAGCGACGGATAACAGGCCGCAAAGGAGGAAAGCACATTGA
mRNA sequenceShow/hide mRNA sequence
CCTCTCTAAAAATCTATCTTCAACCAAAGGTTATAAAAATTTTAATTTTAAACCCTCAAAATAACTCATCCCGCTAACTTCTAATCGAAACACCTTCCAAATGATTTCTT
ACCCATAGAAAAGATCAATCGTCAATTTAAGGAAGAAAACAAAAAAAAAATCTTAATCGTCAATTTGAAAGAAGGCCTAGTTTTCATCTTCTTCACGACGGTTTGTTCAT
CATTCGTCCAACTTTCATTTACTTTCTCTTTCAAGCTACCAAATCAAAGCAAATATGAAATTTCAATTTTCAAGCCAGAGAATCTCATAGCCGCGATCGATCTCCATCTC
CAATGGCGAACCGGAAACTGGTTGATTCAACGCCATGGATTCTCGATCTCGTGCCTTTCATCGTCGTTGTTCTAATCGCCGCTCACGTTCTCGCTCTGGTTTACTGGATT
TACCGATTAGCGACGGATAACAGGCCGCAAAGGAGGAAAGCACATTGAAGATAAGAAGGTTAGTGGAACCCTAATTTGTTCAATTTTTCGCTGTAATGCTAACAGGAAAA
CGTGTTTGGTACCGATTTTTATTACTGGTTACTGTATTTAACTGTTGGGAATCATGTATAACAGATCCTTGCTTTAATGTCGGTCGAATTAGATTGGTTTAAGTGTTCTG
TTTCTGATCTACATGATTGATCTTCTTATAGCTGCTTCTCTAACTTTAGGGATATTAAACTGCTTCTTTAGTTTTCCGTTTCCAAGAAGTGGTACAATGATTGAAGATTT
GAGTTTTGAAGGTATGCTCCCTTCAAGGTCTTAAGTTCAAGGTCTCAAGTTCGAGATTAACCAGTGACATTATTCGTTCGATGTTTCAATGTCTCGAGTGTCTGGTTTAG
GAAGACGTGGTTACCTTGTTTCGAAAAAAAAAGAAATTAGGTATTCAATTATCTGGCTGTACTGTCCTCTTCAGCTGTCAATATTTAACTATTTAGTATCAATGCAATTA
GAAAATTGAGCCTACATTGTTTGGTGTTTTTAGTCTATTGACGCACATTTTTCATTCCCAC
Protein sequenceShow/hide protein sequence
MANRKLVDSTPWILDLVPFIVVVLIAAHVLALVYWIYRLATDNRPQRRKAH