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Sed0025867 (gene) of Chayote v1 genome

Gene IDSed0025867
OrganismSechium edule (Chayote v1)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Genome locationLG05:44842665..44846472
RNA-Seq ExpressionSed0025867
SyntenySed0025867
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571164.1 hypothetical protein SDJN03_30079, partial [Cucurbita argyrosperma subsp. sororia]9.0e-6690.34Show/hide
Query:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE
        GG  KASDLSSKSISFGQAPKL +QRK S T+HKLSVRAE+NDGGRNGGG+FVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRA+RPIYYD+GLE
Subjt:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE

Query:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        KTRQTLNEKI QLNSAIDNVSSRLRGGN TP+VPVEADPEIEATM
Subjt:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

KAG7010970.1 hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-6691.03Show/hide
Query:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE
        GG  KASDLSSKSISFGQAPKL +QRK S TNHKLSVRAE+NDGGRNGGG+FVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRA+RPIYYD+GLE
Subjt:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE

Query:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        KTRQTLNEKI QLNSAIDNVSSRLRGGN TP+VPVEADPEIEATM
Subjt:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

XP_022944447.1 uncharacterized protein LOC111448897 [Cucurbita moschata]4.0e-6691.03Show/hide
Query:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE
        GG  KASDLSSKSISFGQAPKL +QRK S T+HKLSVRAE+NDGGRNGGG+FVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRA+RPIYYD+GLE
Subjt:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE

Query:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        KTRQTLNEKI QLNSAIDNVSSRLRGGN TPAVPVEADPEIEATM
Subjt:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

XP_023512433.1 uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]1.2e-6590.34Show/hide
Query:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE
        GG  KASDLSSKSISFGQ PKL +QRK S TNHKLSVRAE+NDGGR+GGG+FVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRA+RPIYYD+GLE
Subjt:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE

Query:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        KTRQTLNEKI QLNSAIDNVSSRLRGGN TPAVPVEADPEIEATM
Subjt:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

XP_038902580.1 uncharacterized protein LOC120089235 [Benincasa hispida]4.0e-6691.72Show/hide
Query:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE
        GG  KASDLSSKSISFGQAPKL +QRK S TN KLSVRAE+NDG R+GGGDFVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRRAKRPIYYDEGLE
Subjt:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE

Query:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        KTRQTLN KISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
Subjt:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

TrEMBL top hitse value%identityAlignment
A0A1S3C9M4 uncharacterized protein LOC1034983955.3e-6488.36Show/hide
Query:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE
        GG  KASDLSSKS+SFGQ PKL ++RK S TNHKLSVRAE+NDGGR+GGGDFVAGFLLGGAVFGTLAY+FAPQIRRSILNEDE+GFRRAKRP+YYDEGLE
Subjt:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE

Query:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM
        KTRQTLN KISQLNSAIDNVSSRLRGGNNTPAVPV EA+PEIEATM
Subjt:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM

A0A5D3CQ66 Uncharacterized protein5.3e-6488.36Show/hide
Query:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE
        GG  KASDLSSKS+SFGQ PKL ++RK S TNHKLSVRAE+NDGGR+GGGDFVAGFLLGGAVFGTLAY+FAPQIRRSILNEDE+GFRRAKRP+YYDEGLE
Subjt:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE

Query:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM
        KTRQTLN KISQLNSAIDNVSSRLRGGNNTPAVPV EA+PEIEATM
Subjt:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPV-EADPEIEATM

A0A6J1D647 uncharacterized protein LOC1110172732.9e-6288.28Show/hide
Query:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE
        GG  KASDLSSKSI+FGQAPKL +Q+K   TN KLSVRAE+ND GR GGGDFVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRRAKRPIYYDEGLE
Subjt:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE

Query:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        KTRQTLN KI QLNSAIDNVSSRLRGGNNTPAVPVEADPE EATM
Subjt:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

A0A6J1FVP6 uncharacterized protein LOC1114488972.0e-6691.03Show/hide
Query:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE
        GG  KASDLSSKSISFGQAPKL +QRK S T+HKLSVRAE+NDGGRNGGG+FVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRA+RPIYYD+GLE
Subjt:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE

Query:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        KTRQTLNEKI QLNSAIDNVSSRLRGGN TPAVPVEADPEIEATM
Subjt:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

A0A6J1JGK4 uncharacterized protein LOC1114843145.7e-6690.34Show/hide
Query:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE
        GG  KASDLSSKSISFGQAPKL +QRK S +NHKLSVRAE+NDGGR+GGG+FVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRA+RPIYYD+GLE
Subjt:  GGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLE

Query:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM
        KTRQTLNEKI QLNSAIDNVSSRLRGGN TPAVPVEADPEIEATM
Subjt:  KTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.4.8e-1738.18Show/hide
Query:  SLNLTKWRVNLHSIVSNFGGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEF-NDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNE
        SL+L K    LH       GF+   +    S+SFG      +      T   L++++ + +D G    G FV GF+LGG + G L  ++APQI ++I   
Subjt:  SLNLTKWRVNLHSIVSNFGGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEF-NDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSILNE

Query:  DEYGFRRAKRPIYYDE--GLEKTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEAT
        D     R      YDE   LEKTR+ L EKI+QLNSAID+VSS+L+   +TP     +  EIEAT
Subjt:  DEYGFRRAKRPIYYDE--GLEKTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEAT

AT3G02900.1 unknown protein3.8e-3864.12Show/hide
Query:  LVVQRKGSNTNHKLSVRAEFNDGGRNGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLEKTRQTLNEKISQLNSAIDNV
        L VQ K SN +HKLSV A +  G + GG  DFV GFLLG AVFGTLAYIFAPQIRRS+L+E+EYGF++ ++P+YYDEGLE+ R+ LNEKI QLNSAID V
Subjt:  LVVQRKGSNTNHKLSVRAEFNDGGRNGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLEKTRQTLNEKISQLNSAIDNV

Query:  SSRLRGG-------NNTPAVPVEADPEIEAT
        SSRL+GG        ++P+VPVE D E EAT
Subjt:  SSRLRGG-------NNTPAVPVEADPEIEAT

AT3G02900.2 unknown protein3.8e-3864.12Show/hide
Query:  LVVQRKGSNTNHKLSVRAEFNDGGRNGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLEKTRQTLNEKISQLNSAIDNV
        L VQ K SN +HKLSV A +  G + GG  DFV GFLLG AVFGTLAYIFAPQIRRS+L+E+EYGF++ ++P+YYDEGLE+ R+ LNEKI QLNSAID V
Subjt:  LVVQRKGSNTNHKLSVRAEFNDGGRNGG-GDFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRAKRPIYYDEGLEKTRQTLNEKISQLNSAIDNV

Query:  SSRLRGG-------NNTPAVPVEADPEIEAT
        SSRL+GG        ++P+VPVE D E EAT
Subjt:  SSRLRGG-------NNTPAVPVEADPEIEAT

AT5G16660.1 unknown protein6.2e-4164.43Show/hide
Query:  FAKASDLS--SKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSILN-EDEYGFRRAKRPIYYDEG
        + KA+ LS  +K  S  +   L + +K SN   K SV A + DG R+G  GDF+AGFLLGGAVFG +AYIFAPQIRRS+LN EDEYGF + K+P YYDEG
Subjt:  FAKASDLS--SKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSILN-EDEYGFRRAKRPIYYDEG

Query:  LEKTRQTLNEKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT
        LEKTR+TLNEKI QLNSAIDNVSSRLRG   NT +  VPVE DPE+EAT
Subjt:  LEKTRQTLNEKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT

AT5G16660.2 unknown protein2.6e-3964.43Show/hide
Query:  FAKASDLS--SKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSILN-EDEYGFRRAKRPIYYDEG
        + KA+ LS  +K  S  +   L + +K SN   K SV A   DG R+G  GDF+AGFLLGGAVFG +AYIFAPQIRRS+LN EDEYGF + K+P YYDEG
Subjt:  FAKASDLS--SKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNG-GGDFVAGFLLGGAVFGTLAYIFAPQIRRSILN-EDEYGFRRAKRPIYYDEG

Query:  LEKTRQTLNEKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT
        LEKTR+TLNEKI QLNSAIDNVSSRLRG   NT +  VPVE DPE+EAT
Subjt:  LEKTRQTLNEKISQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEIEAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATTGCTGTGAACGAAGGATTTTATTGGAAACCAATCGAAAATTTGTGGTCTCTTTGAATTTGACAAAATGGAGGGTTAATCTTCACTCGATCGTTTCAAATTT
TGGGGGATTTGCCAAGGCCTCGGATCTCTCCTCAAAGTCTATTTCCTTTGGGCAAGCACCAAAACTTGTTGTTCAGAGGAAAGGCTCAAACACCAACCACAAGTTATCGG
TTCGTGCAGAGTTCAATGATGGTGGTAGAAACGGAGGCGGGGACTTTGTTGCTGGTTTTCTTCTTGGGGGTGCTGTATTTGGAACTTTAGCTTATATTTTTGCCCCGCAG
ATCAGGAGATCTATACTGAATGAAGATGAGTATGGTTTTCGGAGGGCTAAGCGTCCAATCTACTACGACGAAGGTCTAGAGAAAACCAGACAGACGTTGAACGAAAAAAT
AAGCCAATTGAATTCTGCGATTGACAATGTATCTTCACGTCTGAGAGGTGGCAACAATACTCCTGCTGTGCCAGTTGAAGCCGATCCTGAGATTGAAGCTACCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATAAAATAAAAAGGTAATAGAGGCGAGCAGTCAGCCGGCTATCTTCATCACTCTCCAGCTCTGTCTTCTTCGACATGGCCGCCTGCTTCGCTCCTTCTGTCTCCGTTTCT
GGTTGTTATGTTAGACGGAGCTTTGTTCAATGTTGGATTGCTGTGAACGAAGGATTTTATTGGAAACCAATCGAAAATTTGTGGTCTCTTTGAATTTGACAAAATGGAGG
GTTAATCTTCACTCGATCGTTTCAAATTTTGGGGGATTTGCCAAGGCCTCGGATCTCTCCTCAAAGTCTATTTCCTTTGGGCAAGCACCAAAACTTGTTGTTCAGAGGAA
AGGCTCAAACACCAACCACAAGTTATCGGTTCGTGCAGAGTTCAATGATGGTGGTAGAAACGGAGGCGGGGACTTTGTTGCTGGTTTTCTTCTTGGGGGTGCTGTATTTG
GAACTTTAGCTTATATTTTTGCCCCGCAGATCAGGAGATCTATACTGAATGAAGATGAGTATGGTTTTCGGAGGGCTAAGCGTCCAATCTACTACGACGAAGGTCTAGAG
AAAACCAGACAGACGTTGAACGAAAAAATAAGCCAATTGAATTCTGCGATTGACAATGTATCTTCACGTCTGAGAGGTGGCAACAATACTCCTGCTGTGCCAGTTGAAGC
CGATCCTGAGATTGAAGCTACCATGTAAATTCCAACTTAAAAAAACATAATCCAAAGGGTTTGAACTTTTTATGTCTTAGAGACCATATCATGTTACAATTTTTAACTGA
AATTTCATTTGATTGATCCAAATCAAAATGGGATGTTACAGGTTATTAGCATCGTTCGCAACATTTTAATATCTTACTTCTAGATCTAAGAGTTTTTCTTTTAATTTTTT
TGATATCCGAATTATTGAAGCTTTGCTACTCTAAACCTGAGGCAACACTTCTTTCAACTTAAATATCAT
Protein sequenceShow/hide protein sequence
MLDCCERRILLETNRKFVVSLNLTKWRVNLHSIVSNFGGFAKASDLSSKSISFGQAPKLVVQRKGSNTNHKLSVRAEFNDGGRNGGGDFVAGFLLGGAVFGTLAYIFAPQ
IRRSILNEDEYGFRRAKRPIYYDEGLEKTRQTLNEKISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM