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Sed0025873 (gene) of Chayote v1 genome

Gene IDSed0025873
OrganismSechium edule (Chayote v1)
DescriptionAWPM-19-like protein
Genome locationLG09:1701742..1709941
RNA-Seq ExpressionSed0025873
SyntenySed0025873
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008390 - AWPM-19-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE5956529.1 unnamed protein product [Arabidopsis arenosa]1.2e-7660.54Show/hide
Query:  VQQSWRLRFSFRNATIGLCLMNLVAAFLLIQGFLSADSSRSRLSSTNRHLD-QLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAA
        +   WR+RFSF+NATI L ++N++    L+QGF ++ SS +  SS+ R +  QL+YI+E+EE+RL MQPLELIKRVREI+QE   G E  Q+KD KQ  A
Subjt:  VQQSWRLRFSFRNATIGLCLMNLVAAFLLIQGFLSADSSRSRLSSTNRHLD-QLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAA

Query:  IDLSKRLKDFRSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVE
        +DLSKRLKDFR+ NDASSLKG GGNGATPFFLTF++L AV+G+ASKLAG  HIR WR+DSLA AG+++++ WA+T LA GLACKQI+I   RGWRL+++E
Subjt:  IDLSKRLKDFRSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVE

Query:  AFIIILTFTQLLYLLLLHAGIFSRQYGPGYWDTDYGMGGG----PAAAGEHPKGPAGTRVV
        AFIIILTFTQ LYL+L+HAG  S +YGPGY D DY  G G    P   GEH  G   T  V
Subjt:  AFIIILTFTQLLYLLLLHAGIFSRQYGPGYWDTDYGMGGG----PAAAGEHPKGPAGTRVV

CAF1923696.1 unnamed protein product, partial [Brassica napus]6.1e-7665.75Show/hide
Query:  WRLRFSFRNATIGLCLMNLVAAFLLIQGFLSADSSRSRLSSTNRHLDQLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAAIDLSK
        WR R SF+NATI L L+NL+    L+QGF S+ SSR  +S+      QL+Y++E+EEIRL MQPLELIKRVREI+ E+  G E  QEKD KQNAA+DLSK
Subjt:  WRLRFSFRNATIGLCLMNLVAAFLLIQGFLSADSSRSRLSSTNRHLDQLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAAIDLSK

Query:  RLKDFRSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIII
        RLKDFRS NDASSLKG GGNGAT FFLTF++L AV+GIASKLAG  HIR WR+DSLA AGS+S++ WAVT LA GLACKQI+I   RGWRLR++EAFIII
Subjt:  RLKDFRSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIII

Query:  LTFTQLLYLLLLHAGIFSRQYGPGYWDTDYGMGGG-----PAAAGEHPKGPAGT
        LTFTQLLY+LL+HAG+FS +YGPGY D DY  G G        AGEH  G   T
Subjt:  LTFTQLLYLLLLHAGIFSRQYGPGYWDTDYGMGGG-----PAAAGEHPKGPAGT

CAF2052138.1 unnamed protein product [Brassica napus]8.5e-6270.05Show/hide
Query:  LDQLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAAIDLSKRLKDFRSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGL
        L QL+YI+E+EEIRLAMQPL+LIKRVREI+QE   G E  Q+   KQN A+DLSKRLKDF     ASSLK  GGNGATPFFLTF++L AV+G+ASKLAG 
Subjt:  LDQLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAAIDLSKRLKDFRSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGL

Query:  YHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEH
         HIR WR+DSLA AGSAS++ WAVT LA GLACKQI+I   RGWRLR++EAFIIILTFTQLLYLLL+HAG FS +YGPGY DTDY  G G    G H
Subjt:  YHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEH

CAF2116691.1 unnamed protein product [Brassica napus]7.7e-6370.05Show/hide
Query:  LDQLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAAIDLSKRLKDFRSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGL
        L QL+YI+ +EE RLAMQPL+LIK+VREI+QE   G E  QEKD KQN A+DLSKRLK+F      SSLKG GGNGATPFFLTF++L AV+GIASKLAG 
Subjt:  LDQLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAAIDLSKRLKDFRSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGL

Query:  YHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEH
         HIR WR+DSLA AGSAS++ WAVT LA GLACKQI+I   RGWRLR++EAFIIILTFTQLLYLLL+HAG FS +YGPGY DTDY  G G    G H
Subjt:  YHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEH

CAG7867571.1 unnamed protein product [Brassica rapa]5.0e-6270.05Show/hide
Query:  LDQLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAAIDLSKRLKDFRSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGL
        L QL+YI+E+EEIRLAMQPL+LIK VREI+QE   G E  Q+   KQN A+DLSKRLKDF     ASSLKG GGNGATPFFLTF++L AV+G+ASKLAG 
Subjt:  LDQLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAAIDLSKRLKDFRSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGL

Query:  YHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEH
         HIR WR+DSLA AGSAS++ WAVT LA GLACKQI+I   RGWRLR++EAFIIILTFTQLLYLLL+HAG FS +YGPGY DTDY  G G    G H
Subjt:  YHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEH

TrEMBL top hitse value%identityAlignment
A0A0A0LI45 Uncharacterized protein5.9e-6187.07Show/hide
Query:  RSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQ
        R  N  +    MGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGS SLLTWAVTVLAFGLACKQI+I  HRGWRLRVVEAFIIILTFTQ
Subjt:  RSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQ

Query:  LLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRVV
        LLYLLLLHAGIFSR+YGPGYWDTDYGMGGG AA GE PKG  GTRVV
Subjt:  LLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRVV

A0A1S3CDH8 uncharacterized protein LOC1034994662.0e-6187.76Show/hide
Query:  RSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQ
        R  N  +    MGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGS SLLTWAVTVLAFGLACKQI+I  HRGWRLRVVEAFIIILTFTQ
Subjt:  RSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQ

Query:  LLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRVV
        LLYLLLLHAGIFSR+YGPGYWDTDYGMGGG AA GE PKG AGTRVV
Subjt:  LLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRVV

A0A5D3CZ29 AWPM-19-like protein1.2e-6193.38Show/hide
Query:  MGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLYLLLLHAGI
        MGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGS SLLTWAVTVLAFGLACKQI+I  HRGWRLRVVEAFIIILTFTQLLYLLLLHAGI
Subjt:  MGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLYLLLLHAGI

Query:  FSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRVV
        FSR+YGPGYWDTDYGMGGG AA GE PKG AGTRVV
Subjt:  FSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRVV

A0A6J1H5I7 uncharacterized protein LOC1114603173.0e-6085.71Show/hide
Query:  RSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQ
        R  N  +    MGGNGATPFFLTFAMLTAV+G+ASKLAGLYHIRAWRSDSLAGAGS SLLTWAVTVLAFGLACKQISI  HRGWRLRVVEAFIIILT TQ
Subjt:  RSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQ

Query:  LLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRVV
        LLYLLLLHAGIFSR+YGPGYWDTDYGMGGG A  GE PKG AGTRVV
Subjt:  LLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRVV

A0A6J1KYX7 uncharacterized protein LOC1114988584.0e-5783.67Show/hide
Query:  RSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQ
        R  N  +    MGG+  TPFFLTFAMLTAV+G+ASKLAGLYHIRAWRSDSLAGAGS SLLTWAVTVLAFGLACKQISI  HRGWRLRVVEAFIIILT TQ
Subjt:  RSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQ

Query:  LLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRVV
        LLYLLLLHAGIFSR+YGPGYWDTDYGMGGG A  GE PKG AGTRVV
Subjt:  LLYLLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRVV

SwissProt top hitse value%identityAlignment
Q6L4D2 Membrane protein PM19L6.2e-3151.75Show/hide
Query:  NDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLY
        N  ++  G+ GNGAT +FL FA+L  V+G ASKLAG++H+R+W + SLA   +++L+ WA+T LAFGLACK+I I  +RGWRLRV+EAF+IIL FTQLLY
Subjt:  NDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLY

Query:  LLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRV
        + +LH G+FS  +  G      G  GG   A  H K  A  RV
Subjt:  LLLLHAGIFSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRV

Arabidopsis top hitse value%identityAlignment
AT1G04555.1 unknown protein8.3e-3158.2Show/hide
Query:  VQQSWRLRFSFRNATIGLCLMNLVAAFLLIQGFLSADSSRSRLSSTNRHLD-QLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAA
        +   WR+RFSF+NATI L ++N++    L+QGF ++ SS S  SS+ R +  QL+YI+E+EE+RL MQPLELI+RVREI+QEA  G E  Q+KD KQ  A
Subjt:  VQQSWRLRFSFRNATIGLCLMNLVAAFLLIQGFLSADSSRSRLSSTNRHLD-QLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAA

Query:  IDLSKRLKDFRSSNDASSLKGM
        +DLSKRLKDFR+ NDASSLK +
Subjt:  IDLSKRLKDFRSSNDASSLKGM

AT1G04560.1 AWPM-19-like family protein2.1e-4260Show/hide
Query:  NDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLY
        N  ++    GGNGATPFFLTF++L AV+G+ASKLAG  HIR WR+DSLA AG++S++ WA+T LA GLACKQI+I   RGWRL+++EAFIIILTFTQLLY
Subjt:  NDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISI-SHRGWRLRVVEAFIIILTFTQLLY

Query:  LLLLHAGIFSRQYGPGYWDTDY------GMGGGPAAAGEHPKGPAGTRVV
        L+L+HAG  S +YGPGY D DY      G G  P   GEH  G   T  V
Subjt:  LLLLHAGIFSRQYGPGYWDTDY------GMGGGPAAAGEHPKGPAGTRVV

AT1G29520.1 AWPM-19-like family protein7.3e-1948.94Show/hide
Query:  GNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISISHRGWRLRVVEAFIIILTFTQLLYLLLLH
        GN AT FF+ FA+L  V+G AS ++GL HIR+W   SL  A +A+ + W +TVLA G A K+I +  R  +LR +EAF+IIL+ TQL+Y+  +H
Subjt:  GNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISISHRGWRLRVVEAFIIILTFTQLLYLLLLH

AT5G18970.1 AWPM-19-like family protein1.7e-1542.27Show/hide
Query:  GNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISISHRGWRLRVVEAFIIILTFTQLLYLLLLHAGI
        GN AT FF+ F ++  V+G+A+ L G+ ++  W S +L  A ++SL++W++T+LA GLACK+I+I      LR +E   II++ TQLL    +HAG+
Subjt:  GNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISISHRGWRLRVVEAFIIILTFTQLLYLLLLHAGI

AT5G46530.1 AWPM-19-like family protein2.8e-1845.74Show/hide
Query:  GNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISISHRGWRLRVVEAFIIILTFTQLLYLLLLH
        GN AT FF+ FA++  V G AS ++G+ H+++W + SL  A SA+ + W++T+LA G  CK+I +  R  RLR +EAF+IIL+ TQLLY+  ++
Subjt:  GNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISISHRGWRLRVVEAFIIILTFTQLLYLLLLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTTCAACAGTCATGGAGATTGAGATTCTCGTTCAGAAATGCGACCATAGGTTTGTGCTTGATGAACTTGGTGGCCGCTTTTCTTCTGATTCAGGGGTTTTTATC
TGCTGATTCTTCTCGCAGTCGACTCTCATCAACAAATCGCCATCTGGATCAACTGAAATATATCAGGGAATCAGAAGAGATTCGACTTGCCATGCAACCTTTGGAACTGA
TTAAAAGGGTAAGGGAAATTCAGCAGGAAGCATATCATGGAACAGAAGATGTACAAGAGAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAGAGATTGAAAGAC
TTTCGTTCATCCAACGATGCTTCCAGCCTAAAAGGTATGGGAGGCAATGGAGCGACGCCGTTTTTCTTGACATTTGCAATGCTGACGGCGGTTCTGGGAATAGCATCAAA
ACTGGCTGGACTTTACCATATCAGAGCATGGAGGAGCGACAGCCTCGCCGGTGCCGGCTCGGCGTCTCTGCTCACTTGGGCTGTAACTGTTCTTGCTTTTGGCTTGGCCT
GCAAACAAATCAGTATAAGCCACAGAGGGTGGAGGCTGAGAGTGGTGGAAGCTTTCATAATCATATTGACCTTCACTCAGCTTCTGTACCTCCTCCTCCTCCACGCCGGA
ATCTTCAGCCGCCAATACGGCCCCGGTTATTGGGACACCGACTACGGCATGGGCGGAGGACCCGCTGCGGCGGGCGAGCATCCTAAGGGACCTGCTGGGACTAGGGTGGT
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTTCAACAGTCATGGAGATTGAGATTCTCGTTCAGAAATGCGACCATAGGTTTGTGCTTGATGAACTTGGTGGCCGCTTTTCTTCTGATTCAGGGGTTTTTATC
TGCTGATTCTTCTCGCAGTCGACTCTCATCAACAAATCGCCATCTGGATCAACTGAAATATATCAGGGAATCAGAAGAGATTCGACTTGCCATGCAACCTTTGGAACTGA
TTAAAAGGGTAAGGGAAATTCAGCAGGAAGCATATCATGGAACAGAAGATGTACAAGAGAAAGACTCCAAGCAGAATGCTGCCATTGATCTTTCTAAGAGATTGAAAGAC
TTTCGTTCATCCAACGATGCTTCCAGCCTAAAAGGTATGGGAGGCAATGGAGCGACGCCGTTTTTCTTGACATTTGCAATGCTGACGGCGGTTCTGGGAATAGCATCAAA
ACTGGCTGGACTTTACCATATCAGAGCATGGAGGAGCGACAGCCTCGCCGGTGCCGGCTCGGCGTCTCTGCTCACTTGGGCTGTAACTGTTCTTGCTTTTGGCTTGGCCT
GCAAACAAATCAGTATAAGCCACAGAGGGTGGAGGCTGAGAGTGGTGGAAGCTTTCATAATCATATTGACCTTCACTCAGCTTCTGTACCTCCTCCTCCTCCACGCCGGA
ATCTTCAGCCGCCAATACGGCCCCGGTTATTGGGACACCGACTACGGCATGGGCGGAGGACCCGCTGCGGCGGGCGAGCATCCTAAGGGACCTGCTGGGACTAGGGTGGT
TTAGAACAGATGGGTTGTGTATTGTATAATGTATCTCACTGGGTTTGTTTTCTGTGCAAGTAAGAACATAATAGTTTCTGCCTTCTAGTTCTGGTTGTGTAATTTGCTTC
AAAACCTTCAATGTAGGATGTTGGGTCTTTCACATAAAGTAAAG
Protein sequenceShow/hide protein sequence
MEVQQSWRLRFSFRNATIGLCLMNLVAAFLLIQGFLSADSSRSRLSSTNRHLDQLKYIRESEEIRLAMQPLELIKRVREIQQEAYHGTEDVQEKDSKQNAAIDLSKRLKD
FRSSNDASSLKGMGGNGATPFFLTFAMLTAVLGIASKLAGLYHIRAWRSDSLAGAGSASLLTWAVTVLAFGLACKQISISHRGWRLRVVEAFIIILTFTQLLYLLLLHAG
IFSRQYGPGYWDTDYGMGGGPAAAGEHPKGPAGTRVV