; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025892 (gene) of Chayote v1 genome

Gene IDSed0025892
OrganismSechium edule (Chayote v1)
DescriptionActin-depolymerizing factor
Genome locationLG13:820662..821539
RNA-Seq ExpressionSed0025892
SyntenySed0025892
Gene Ontology termsGO:0030042 - actin filament depolymerization (biological process)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003779 - actin binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002108 - Actin-depolymerising factor homology domain
IPR017904 - ADF/Cofilin
IPR029006 - ADF-H/Gelsolin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022922474.1 actin-depolymerizing factor 7-like isoform X1 [Cucurbita moschata]5.1e-6393.85Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAVSDECKLKFLELKTKRNYRFI+FKIENQEVVV+KLG PQ+TYD+F AAIP +ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARAF
        FKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARAF

XP_022922475.1 ATP-dependent RNA helicase glh-2-like isoform X2 [Cucurbita moschata]5.1e-6393.85Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAVSDECKLKFLELKTKRNYRFI+FKIENQEVVV+KLG PQ+TYD+F AAIP +ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARAF
        FKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARAF

XP_023552826.1 uncharacterized protein LOC111810346 [Cucurbita pepo subsp. pepo]1.3e-6394.62Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAVSDECKLKFLELKTKRNYRFI+FKIENQEVVV+KLG PQ+TYD+F AAIP NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARAF
        FKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARAF

XP_031738809.1 actin-depolymerizing factor 7 [Cucumis sativus]5.1e-6394.62Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAV DECKLKFLELKTKRNYRFIIFKIENQEVVVEKLG P+ETYD+F+AAIP NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARAF
        FKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARAF

XP_038886312.1 uncharacterized protein LOC120076526 [Benincasa hispida]5.1e-6394.62Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAV DECKLKFLELKTKRNYRFIIFKIENQEVVVEKLG P+ETY++FTAAIP NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARAF
        FKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARAF

TrEMBL top hitse value%identityAlignment
A0A0A0LBE8 ADF-H domain-containing protein2.5e-6394.62Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAV DECKLKFLELKTKRNYRFIIFKIENQEVVVEKLG P+ETYD+F+AAIP NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARAF
        FKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARAF

A0A5A7SR44 Zinc finger CCHC domain-containing protein 93.2e-6394.62Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAV DECKLKFLELK KRNYRFIIFKIENQEVVVEKLG P+ETYD+FTAAIP NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARAF
        FKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARAF

A0A5D3DH64 Zinc finger CCHC domain-containing protein 93.2e-6394.62Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAV DECKLKFLELK KRNYRFIIFKIENQEVVVEKLG P+ETYD+FTAAIP NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARAF
        FKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARAF

A0A6J1E3H3 actin-depolymerizing factor 7-like isoform X12.5e-6393.85Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAVSDECKLKFLELKTKRNYRFI+FKIENQEVVV+KLG PQ+TYD+F AAIP +ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARAF
        FKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARAF

A0A6J1E8U1 ATP-dependent RNA helicase glh-2-like isoform X22.5e-6393.85Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAVSDECKLKFLELKTKRNYRFI+FKIENQEVVV+KLG PQ+TYD+F AAIP +ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARAF
        FKRELDGIQVELQATDPSEMSFDIIKARAF
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARAF

SwissProt top hitse value%identityAlignment
P30174 Actin-depolymerizing factor (Fragment)4.1e-5584.8Show/hide
Query:  DECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRE
        D CKLKFLELK KR +RFIIF+I+ Q+VVVEKLG PQETYD+FTA++P +ECRYAVFDFDFTT+ENCQKSKIFFIAWSPD+S VR KMVYASSKDRFKRE
Subjt:  DECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRE

Query:  LDGIQVELQATDPSEMSFDIIKARA
        LDGIQVELQATDPSEMSFDIIK+RA
Subjt:  LDGIQVELQATDPSEMSFDIIKARA

P30175 Actin-depolymerizing factor1.6e-5680.3Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSK
        MAV DECKLKF+ELK KRN+RFI+FKIE   Q+V VE+LG P E+YD+FT  +P NECRYAVFDFDF TDENCQKSKIFFI+WSPDTS VR+KM+YAS+K
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSK

Query:  DRFKRELDGIQVELQATDPSEMSFDIIKARAF
        DRFKRELDGIQVELQATDPSEMS DIIKARAF
Subjt:  DRFKRELDGIQVELQATDPSEMSFDIIKARAF

Q67ZM4 Actin-depolymerizing factor 72.5e-6086.82Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG P ETYD+FTA++P NECRYAVFDFDF TDENCQKSKIFFIAWSPD+S VR KMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARA
        FKRELDGIQVELQATDPSEMSFDIIK+RA
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARA

Q8LFH6 Actin-depolymerizing factor 121.3e-5683.72Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAV DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLG PQE YD+FT  +P NECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARA
        FKRELDGIQVELQATDPSEMS DIIK+RA
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARA

Q9LQ81 Actin-depolymerizing factor 103.1e-5579.23Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSK
        M VSDECKLKFLELK KRNYRFI+FKI+   Q+V+++KLG P+ETY++FT +IP +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+KM+YASSK
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSK

Query:  DRFKRELDGIQVELQATDPSEMSFDIIKAR
        DRFKRELDGIQVELQATDPSEMS DIIK R
Subjt:  DRFKRELDGIQVELQATDPSEMSFDIIKAR

Arabidopsis top hitse value%identityAlignment
AT1G01750.1 actin depolymerizing factor 112.2e-5679.23Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSK
        M VSDECKLKFLELK KRNYRFI+FKI+   Q+V+++KLG P+ETY++FT +IP +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+KM+YASSK
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSK

Query:  DRFKRELDGIQVELQATDPSEMSFDIIKAR
        DRFKRELDGIQVELQATDPSEMS DIIK R
Subjt:  DRFKRELDGIQVELQATDPSEMSFDIIKAR

AT3G46000.1 actin depolymerizing factor 24.3e-5269.53Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAV D+CKLKF+ELK KR +R I++KIE+++V+VEKLG P+++YD+F A++P ++CRY ++DFDF T ENCQKSKIFFIAWSPDT+ VR+KM+YASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKAR
        FKRELDGIQVELQATDP+EM  D+ K+R
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKAR

AT4G00680.1 actin depolymerizing factor 83.2e-5576.92Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSK
        M V+DECK+KFLELK KR YRFI+FKI+   Q+V +EKLG P+ETYD+FT++IP +ECRYAV+DFDFTT++NCQKSKIFFIAWSPDTS VR+KM+YASSK
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSK

Query:  DRFKRELDGIQVELQATDPSEMSFDIIKAR
        DRFKRE++GIQVELQATDPSEMS DIIK R
Subjt:  DRFKRELDGIQVELQATDPSEMSFDIIKAR

AT4G25590.1 actin depolymerizing factor 71.7e-6186.82Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG P ETYD+FTA++P NECRYAVFDFDF TDENCQKSKIFFIAWSPD+S VR KMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARA
        FKRELDGIQVELQATDPSEMSFDIIK+RA
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARA

AT5G52360.1 actin depolymerizing factor 109.0e-5883.72Show/hide
Query:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR
        MAV DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLG PQE YD+FT  +P NECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMVYASSKDR
Subjt:  MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR

Query:  FKRELDGIQVELQATDPSEMSFDIIKARA
        FKRELDGIQVELQATDPSEMS DIIK+RA
Subjt:  FKRELDGIQVELQATDPSEMSFDIIKARA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTGAGTGATGAATGCAAGCTCAAATTTTTGGAATTAAAAACGAAGAGAAACTATCGTTTCATTATATTTAAGATTGAGAATCAGGAAGTCGTAGTGGAGAAACT
TGGAGGTCCTCAAGAAACGTATGATAATTTTACTGCCGCTATTCCTCGTAATGAGTGTCGCTATGCTGTTTTCGACTTTGATTTCACTACTGACGAGAACTGCCAGAAAA
GCAAGATTTTCTTTATAGCATGGTCACCCGACACATCGATAGTGCGAAATAAGATGGTGTACGCAAGCTCGAAGGACAGATTCAAGAGAGAATTGGATGGAATTCAGGTG
GAACTGCAAGCCACGGATCCCAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTGAGTGATGAATGCAAGCTCAAATTTTTGGAATTAAAAACGAAGAGAAACTATCGTTTCATTATATTTAAGATTGAGAATCAGGAAGTCGTAGTGGAGAAACT
TGGAGGTCCTCAAGAAACGTATGATAATTTTACTGCCGCTATTCCTCGTAATGAGTGTCGCTATGCTGTTTTCGACTTTGATTTCACTACTGACGAGAACTGCCAGAAAA
GCAAGATTTTCTTTATAGCATGGTCACCCGACACATCGATAGTGCGAAATAAGATGGTGTACGCAAGCTCGAAGGACAGATTCAAGAGAGAATTGGATGGAATTCAGGTG
GAACTGCAAGCCACGGATCCCAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCTTTTTAA
Protein sequenceShow/hide protein sequence
MAVSDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGGPQETYDNFTAAIPRNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQV
ELQATDPSEMSFDIIKARAF