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Sed0025893 (gene) of Chayote v1 genome

Gene IDSed0025893
OrganismSechium edule (Chayote v1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationLG11:412114..416085
RNA-Seq ExpressionSed0025893
SyntenySed0025893
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021289.1 hypothetical protein SDJN02_17977 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-2983.33Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MASLKAVSRLSSRLH LASKLNKR   SSSS+ SPFKST +S+  A STSR SC SRLPLELSSQGSLMPLHSAIA+ARLISSL IESR WGLVPQGISM
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

XP_022938270.1 uncharacterized protein LOC111444407 [Cucurbita moschata]2.2e-2983.33Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MASLKAVSRLSSRLH LASKLNKR   SSSS+ SPFKST +S+  A STSR SC SRLPLELSSQGSLMPLHSAIA+ARLISSL IESR WGLVPQGISM
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

XP_022966032.1 uncharacterized protein LOC111465737 [Cucurbita maxima]1.3e-2983.33Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MASL+AVSR+SSRLH LASKLNKR   SSSS+ SPFKST +S+  A STSR SC SRLPLELSSQGSLMPLHSAIASARLISSLTIESR WGLVPQGISM
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

XP_023538189.1 uncharacterized protein LOC111799036 [Cucurbita pepo subsp. pepo]1.3e-2984.31Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MASLKAVSRLSSRLH LASKLNKR   SSSS+ SPFKST +S+  A STSR SC SRLPLELSSQGSLMPLHSAIASARLISSL IESR WGLVPQGISM
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

XP_023547330.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo]4.9e-2981.37Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MASL+AVSRLSSRL  LA KLNKR   S SSELSPFKS+ +SQP A+STSR SC SRLPLELSSQGSLMPLHSAIA+ARLISSL+IES+ WGLVPQGISM
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

TrEMBL top hitse value%identityAlignment
A0A0A0LKT5 Uncharacterized protein3.4e-2880.39Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MASLKAVSRLSSRL  LA K NKR   SSSSEL  FKST +SQP A+STSR  C SRLP+ELSSQGSLMPLHSAIA+ARLISSLTIES+ WGLVPQGISM
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

A0A6J1FCN7 uncharacterized protein LOC1114444071.1e-2983.33Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MASLKAVSRLSSRLH LASKLNKR   SSSS+ SPFKST +S+  A STSR SC SRLPLELSSQGSLMPLHSAIA+ARLISSL IESR WGLVPQGISM
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

A0A6J1G399 uncharacterized protein LOC1114503803.1e-2981.37Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MASL+AVSRLSSRL  LA KLNKR   S SSELSPFKS  +SQP A+STSR SC SRLPLELSSQGSLMPLHSAIA+ARLISSL+IES+ WGLVPQGISM
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

A0A6J1HLX3 uncharacterized protein LOC1114657376.3e-3083.33Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MASL+AVSR+SSRLH LASKLNKR   SSSS+ SPFKST +S+  A STSR SC SRLPLELSSQGSLMPLHSAIASARLISSLTIESR WGLVPQGISM
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

A0A6J1KDE2 uncharacterized protein LOC1114938761.2e-2880.39Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MASL+AVSRLSSRL  LA KLNKR   S SSELSPFKS+ +SQP A+S SR SC SRLPLELSSQGSLMPLHSAIA+ARLISSL+IES+ WGLVPQGISM
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein5.4e-1858.82Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MAS   + RLSS++H L  KL+K +   SS   SP KS+S S    S+TSR + + RLP+ELS   S++PLHSAIASARLISSL++ES+ WGLVPQGISM
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

AT1G55205.2 unknown protein2.5e-1556.57Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGIS
        MAS   + RLSS++H L  KL+K +   SS   SP KS+S S    S+TSR + + RLP+ELS   S++PLHSAIASARLISSL++ES+ WGLVPQG S
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGIS

AT3G13674.1 unknown protein7.4e-1550.98Show/hide
Query:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM
        MAS + + R SSRL  L   L+ ++++ SS   SP KS S   P ++++ R + +SRLP+ELS   S++PLHSAIAS+RL+SSL++ES+ WGLVPQG+S+
Subjt:  MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISM

Query:  PL
        PL
Subjt:  PL

AT4G39300.1 unknown protein6.9e-0539.56Show/hide
Query:  SRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISMPL
        S L   +  L  RS + +   L+  K T+ S PFAS +      SR+   L S  +++PLHSA+ASARL SS+  +S  W L+ QG++ PL
Subjt:  SRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISMPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTTAAAGGCAGTCTCTAGGTTATCATCTCGCTTGCATGGGCTCGCTTCAAAGCTCAACAAAAGATCTTCATCTTCATCTTCTTCTGAGCTATCTCCGTTCAA
ATCGACTTCTAAATCTCAGCCCTTCGCATCTTCTACATCGCGTCAATCTTGCAATTCGCGGTTACCGTTGGAGTTGAGTAGCCAGGGGTCACTGATGCCATTGCACAGCG
CCATAGCTTCAGCGAGATTGATATCGAGTCTGACCATTGAATCTCGAGAATGGGGTTTGGTTCCTCAGGGTATTTCAATGCCTTTATGA
mRNA sequenceShow/hide mRNA sequence
CTTCGATTTAGGTTTGATAGCCCGGTCAGAGTTATCCATTTTTGTGTACACCCTACTTAAAACTGAGATAGTTTTGTGAAACGGCGACGTCTGAAACCTGGATGTGTTCA
TAAAACCCTGATCTAATTCTTTGAAGCCCATTTCATTACAGTCCGAGCTTTACCACAGGTCTCCAATGGCGTCCTTAAAGGCAGTCTCTAGGTTATCATCTCGCTTGCAT
GGGCTCGCTTCAAAGCTCAACAAAAGATCTTCATCTTCATCTTCTTCTGAGCTATCTCCGTTCAAATCGACTTCTAAATCTCAGCCCTTCGCATCTTCTACATCGCGTCA
ATCTTGCAATTCGCGGTTACCGTTGGAGTTGAGTAGCCAGGGGTCACTGATGCCATTGCACAGCGCCATAGCTTCAGCGAGATTGATATCGAGTCTGACCATTGAATCTC
GAGAATGGGGTTTGGTTCCTCAGGGTATTTCAATGCCTTTATGACGGTTTTGCTCCGTAGGAAGTTGTTCTCTGCAGTTTACTGTTTGTTTTGACAATTGGAGTTTTTTT
TTTTTTTTTAATCTCCCTTCAAGAATATAAACCTCAAATCACTGCCCTCTGATTTTCTTCTGTCCTAAATGTTGGATTGGGTTTAAAGTTGAATTTCAGCTTGTAATGAT
AAAAAGCATTTTATGATGAATATTTCTCTTACTCTTTAACTTATTCATCGAGAATATACACATCATAATTGTTAAGAGTTATTACTATTGCAAAGGGCATGATGACGTGA
ATTTTAAAGGGATGCTTCTCAAGTTCGAGACTTATTTGTGACATTAATTTATAAATACTTTATGTGTCTCCTTGTTTTAA
Protein sequenceShow/hide protein sequence
MASLKAVSRLSSRLHGLASKLNKRSSSSSSSELSPFKSTSKSQPFASSTSRQSCNSRLPLELSSQGSLMPLHSAIASARLISSLTIESREWGLVPQGISMPL