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Sed0025917 (gene) of Chayote v1 genome

Gene IDSed0025917
OrganismSechium edule (Chayote v1)
DescriptionGlutamate racemase
Genome locationLG10:36348390..36353019
RNA-Seq ExpressionSed0025917
SyntenySed0025917
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588707.1 hypothetical protein SDJN03_17272, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3879.25Show/hide
Query:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS
        MA+ S+QANAL+FRKVKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS V WFRD DGVDDL+PD  P S
Subjt:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS

Query:  WNPRFA
          PR A
Subjt:  WNPRFA

XP_022148740.1 uncharacterized protein LOC111017332 [Momordica charantia]2.8e-3368.18Show/hide
Query:  SLQANALIFRKVKQMRCQFSSLVNGS----HQIDETD-ETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPT
        +++ANA++ R++KQ+R QFSS    S      + E D ETEP  YNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDD +PD +P 
Subjt:  SLQANALIFRKVKQMRCQFSSLVNGS----HQIDETD-ETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPT

Query:  SWNPRFAGSF
        S  PRFA +F
Subjt:  SWNPRFAGSF

XP_022927901.1 uncharacterized protein LOC111434665 [Cucurbita moschata]6.4e-3878.3Show/hide
Query:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS
        MA+ S+QANAL+FR VKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS V WFRD DGVDDL+PD  P S
Subjt:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS

Query:  WNPRFA
          PR A
Subjt:  WNPRFA

XP_022989019.1 uncharacterized protein LOC111486209 [Cucurbita maxima]4.4e-3980.19Show/hide
Query:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS
        MA+ S+QANAL+FRKVKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS V WFRD DGVDDL+PDT P S
Subjt:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS

Query:  WNPRFA
          PR A
Subjt:  WNPRFA

XP_023531513.1 uncharacterized protein LOC111793725 [Cucurbita pepo subsp. pepo]4.4e-3980.19Show/hide
Query:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS
        MA+ S+QANAL+FRKVKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS V WFRD DGVDDL+PDT P S
Subjt:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS

Query:  WNPRFA
          PR A
Subjt:  WNPRFA

TrEMBL top hitse value%identityAlignment
A0A0A0K7S0 Uncharacterized protein4.8e-3167.33Show/hide
Query:  LQANALIFRKVKQMRCQFSSLVNGS------HQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPT
        LQAN L  RK+KQ++ QF  LV  S      ++ D+  ETE L YNSSTWVPHPRTGIYFPQGHEWVMKD+PENAASF R+CWFRDSD VDDL+PD D +
Subjt:  LQANALIFRKVKQMRCQFSSLVNGS------HQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPT

Query:  S
        S
Subjt:  S

A0A1S3C0N8 uncharacterized protein LOC1034952981.2e-2966.34Show/hide
Query:  LQANALIFRKVKQMRCQFSSLV--NGSHQI----DETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPT
        LQAN L  RK+KQ++ QF SLV  + S Q+    D+  ET+ L YNSSTWVPHPRTGIYFPQGHEWVMKD+PENAASFSR+CWFRDSD VDDL+ + + +
Subjt:  LQANALIFRKVKQMRCQFSSLV--NGSHQI----DETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPT

Query:  S
        S
Subjt:  S

A0A6J1D3R9 uncharacterized protein LOC1110173321.4e-3368.18Show/hide
Query:  SLQANALIFRKVKQMRCQFSSLVNGS----HQIDETD-ETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPT
        +++ANA++ R++KQ+R QFSS    S      + E D ETEP  YNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDD +PD +P 
Subjt:  SLQANALIFRKVKQMRCQFSSLVNGS----HQIDETD-ETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPT

Query:  SWNPRFAGSF
        S  PRFA +F
Subjt:  SWNPRFAGSF

A0A6J1EIT6 uncharacterized protein LOC1114346653.1e-3878.3Show/hide
Query:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS
        MA+ S+QANAL+FR VKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS V WFRD DGVDDL+PD  P S
Subjt:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS

Query:  WNPRFA
          PR A
Subjt:  WNPRFA

A0A6J1JN70 uncharacterized protein LOC1114862092.2e-3980.19Show/hide
Query:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS
        MA+ S+QANAL+FRKVKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFS V WFRD DGVDDL+PDT P S
Subjt:  MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS

Query:  WNPRFA
          PR A
Subjt:  WNPRFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73120.1 unknown protein1.0e-0465.38Show/hide
Query:  SSTWVPHPRTGIYFPQGHEWVMKDVP
        +S+WVPH  TGIY+P+G E VM+DVP
Subjt:  SSTWVPHPRTGIYFPQGHEWVMKDVP

AT3G19550.1 unknown protein1.2e-1353.23Show/hide
Query:  DETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPD
        D +D     S    +WVPHPRTGI+FP G E VM+DVP  AASF    W R+ DGVD   PD
Subjt:  DETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGCCTTCTTTGCAGGCAAATGCATTGATTTTTAGGAAAGTGAAACAAATGAGGTGCCAATTTAGCAGCCTTGTAAATGGCTCACATCAAATAGACGAGACAGA
TGAAACAGAGCCATTGTCCTACAATTCTTCAACTTGGGTTCCCCATCCTCGCACTGGAATATACTTTCCTCAGGGTCATGAGTGGGTCATGAAAGATGTCCCTGAAAATG
CAGCCTCGTTCTCTCGTGTTTGCTGGTTTCGGGATTCCGATGGCGTCGATGACCTGAGCCCCGACACCGACCCGACCTCCTGGAACCCTCGGTTCGCCGGCTCTTTCTTT
CGTCGAGAGTGA
mRNA sequenceShow/hide mRNA sequence
GATTTTCTTGTGAAGAAACTTCTCACAAGTTGTTTTGGGATTTGGATTTTCTCGGAAAATTATTTCTTAGAAAGCTGTTTGGCTTTGGATTTTCCAGGAAAGTTTGCTGA
TTTCCTCAGTTGTATGGCAAAGCCTTCTTTGCAGGCAAATGCATTGATTTTTAGGAAAGTGAAACAAATGAGGTGCCAATTTAGCAGCCTTGTAAATGGCTCACATCAAA
TAGACGAGACAGATGAAACAGAGCCATTGTCCTACAATTCTTCAACTTGGGTTCCCCATCCTCGCACTGGAATATACTTTCCTCAGGGTCATGAGTGGGTCATGAAAGAT
GTCCCTGAAAATGCAGCCTCGTTCTCTCGTGTTTGCTGGTTTCGGGATTCCGATGGCGTCGATGACCTGAGCCCCGACACCGACCCGACCTCCTGGAACCCTCGGTTCGC
CGGCTCTTTCTTTCGTCGAGAGTGATCCACGCGGAAGATCAATGGAACAGTAAACCAAATGTGTTCAAGCGAGTTTGGTGTTGGAGTGTGGATGGCTAATGACCAAATTG
GCCTTTGAATAATGTCAGAAATGTAATGTTATATTCCGGGTAGATTGTAAATATAACATAATAAAGGGAAGAAAATTGTAATACTAAATTTATGGTAATCTATCCGATTA
AAACTTTGGAATCTCATAATAATTCAAAATAATATGAGGAGATTTTTCATGAACCATGC
Protein sequenceShow/hide protein sequence
MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTSWNPRFAGSFF
RRE