; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0025918 (gene) of Chayote v1 genome

Gene IDSed0025918
OrganismSechium edule (Chayote v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationLG08:5241394..5242126
RNA-Seq ExpressionSed0025918
SyntenySed0025918
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150016.3 zinc finger Ran-binding domain-containing protein 2 isoform X2 [Cucumis sativus]8.8e-7891.24Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPK+GGPDPSTYSY KTE LAGDWYCT ++CGAHNYASRPNCFRCGAFKSVYPGDYGAY++GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI

Query:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG
        PPGWKSGDW+CPRMGCGVHNYASRMECFKCK  RDFG
Subjt:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG

XP_008465020.2 PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo]8.8e-7891.24Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPK+GGPDPSTYSY KTE LAGDWYCT ++CGAHNYASRPNCFRCGAFKSVYPGDYGAY++GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI

Query:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG
        PPGWKSGDW+CPRMGCGVHNYASRMECFKCK  RDFG
Subjt:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG

XP_008465021.2 PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo]8.8e-7891.24Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPK+GGPDPSTYSY KTE LAGDWYCT ++CGAHNYASRPNCFRCGAFKSVYPGDYGAY++GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI

Query:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG
        PPGWKSGDW+CPRMGCGVHNYASRMECFKCK  RDFG
Subjt:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG

XP_011656267.2 zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus]8.8e-7891.24Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPK+GGPDPSTYSY KTE LAGDWYCT ++CGAHNYASRPNCFRCGAFKSVYPGDYGAY++GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI

Query:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG
        PPGWKSGDW+CPRMGCGVHNYASRMECFKCK  RDFG
Subjt:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG

XP_023516205.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]3.0e-7891.97Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCSYPK+GGPDPSTYSY KTEVLAGDWYCT +NCGAHNYASRPNCFRCGAFKSVYPGDYGAY++GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI

Query:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG
        PPGWKSGDWVCPR+GCG+HNYASRMECFKCK  R FG
Subjt:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG

TrEMBL top hitse value%identityAlignment
A0A0A0LWE1 Uncharacterized protein4.3e-7891.24Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPK+GGPDPSTYSY KTE LAGDWYCT ++CGAHNYASRPNCFRCGAFKSVYPGDYGAY++GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI

Query:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG
        PPGWKSGDW+CPRMGCGVHNYASRMECFKCK  RDFG
Subjt:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG

A0A1S3CMY6 uncharacterized protein LOC103502740 isoform X24.3e-7891.24Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPK+GGPDPSTYSY KTE LAGDWYCT ++CGAHNYASRPNCFRCGAFKSVYPGDYGAY++GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI

Query:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG
        PPGWKSGDW+CPRMGCGVHNYASRMECFKCK  RDFG
Subjt:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG

A0A1S3CNB1 uncharacterized protein LOC103502740 isoform X14.3e-7891.24Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPK+GGPDPSTYSY KTE LAGDWYCT ++CGAHNYASRPNCFRCGAFKSVYPGDYGAY++GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI

Query:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG
        PPGWKSGDW+CPRMGCGVHNYASRMECFKCK  RDFG
Subjt:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG

A0A1S3CPF6 uncharacterized protein LOC103502740 isoform X34.3e-7891.24Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPK+GGPDPSTYSY KTE LAGDWYCT ++CGAHNYASRPNCFRCGAFKSVYPGDYGAY++GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI

Query:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG
        PPGWKSGDW+CPRMGCGVHNYASRMECFKCK  RDFG
Subjt:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG

A0A5D3E0T0 Zinc finger Ran-binding domain-containing protein 2-like isoform X34.3e-7891.24Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPK+GGPDPSTYSY KTE LAGDWYCT ++CGAHNYASRPNCFRCGAFKSVYPGDYGAY++GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASI

Query:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG
        PPGWKSGDW+CPRMGCGVHNYASRMECFKCK  RDFG
Subjt:  PPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c4.1e-0926.92Show/hide
Query:  GDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYS-YIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASIPPGW
        GDW C +C   NF++R +C RCS+P       +T S     +   G+ Y  G +    NY    +       +S      G   +              +
Subjt:  GDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYS-YIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASIPPGW

Query:  KSGDWVCPRMGCGVHNYASRMECFKCKIAR
        ++GDW C   GCG HN+A  + C +C  +R
Subjt:  KSGDWVCPRMGCGVHNYASRMECFKCKIAR

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 25.1e-0433.73Show/hide
Query:  GDWYCTGINCGAHNYASRPNCFRCGAFKSVYPG--DYGAYVIGSDQYGSDASIPPGWKSGDWVCPRMGCGVHNYASRMECFKC
        GDW C    CG  N+A R +C RCG  K+        G   IG         +   + + DW C    CG  N+A R EC  C
Subjt:  GDWYCTGINCGAHNYASRPNCFRCGAFKSVYPG--DYGAYVIGSDQYGSDASIPPGWKSGDWVCPRMGCGVHNYASRMECFKC

Arabidopsis top hitse value%identityAlignment
AT1G48570.1 zinc finger (Ran-binding) family protein2.7e-0839.71Show/hide
Query:  GDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRC
        GDW+C  C  +NF + ++C +C   K  GP  ++   I  E+  GDW CTG  CG  N+AS   C  C
Subjt:  GDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRC

AT2G17975.1 zinc finger (Ran-binding) family protein1.3e-1029.5Show/hide
Query:  WSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIG---SDQYGSDAS
        W +GDWIC  C   N+  R  C +C+      P       + +E LA +W    +N G  +  ++   +   +F  +  G    + +      Q+ + A 
Subjt:  WSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIG---SDQYGSDAS

Query:  IPPG---WKSGDWVCPRMGCGVHNYASRMECFKCKIARD
        +  G   W+ GDW+C    C  HNYASR EC +CK  RD
Subjt:  IPPG---WKSGDWVCPRMGCGVHNYASRMECFKCKIARD

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein1.3e-5564.03Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGD-YGAYVIGSDQYGSD-A
        MSW+ GDW+C  CQ+ NFKKRE+C +C YPK GG D STY Y +TEV+AGDWYC  +NCG+HNYASR +C+RCG  K  Y    YGA ++    YG+D A
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGD-YGAYVIGSDQYGSD-A

Query:  SIPPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG
        + PPGWK+GDWVCPR+GCGVHNYASR ECFKCK  RD+G
Subjt:  SIPPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARDFG

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein4.6e-3242.21Show/hide
Query:  GDWICNVCQNVNFKKREACHRC-------------SYPKHGGPDPSTYSYIK-TEVLAGDWYCTGINCGAHNYASRPNCFRCGAFK-SVYPGDYGAYVIG
        GDW C  C ++NF++R++C RC              +   GG   S + +   ++V  GDWYCT  NCG HN+ASR  CF+CG FK     G  G  + G
Subjt:  GDWICNVCQNVNFKKREACHRC-------------SYPKHGGPDPSTYSYIK-TEVLAGDWYCTGINCGAHNYASRPNCFRCGAFK-SVYPGDYGAYVIG

Query:  SDQYGSD--ASIPPG------WKSGDWVCPRMGCGVHNYASRMECFKCKIARDF
           + +D   S  PG      WKSGDW+C R+GC  HN+ASRMECF+C   RDF
Subjt:  SDQYGSD--ASIPPG------WKSGDWVCPRMGCGVHNYASRMECFKCKIARDF

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein1.6e-2935.85Show/hide
Query:  GDWICNVCQNVNFKKREACHRCSYPKHGG------------PDPSTYSY-IKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGD---------
        GDW C +C ++NF++R++C RC  P+ GG            P  S++ +    +V  GDWYC   +CG HN+A+R +CF+CGA K  +            
Subjt:  GDWICNVCQNVNFKKREACHRCSYPKHGG------------PDPSTYSY-IKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGD---------

Query:  -------YGAYVIGSDQYGSDASIPPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARD
                G +  G    G   +    WKSGDW+CPR GC  HN+ASR ECF+C   ++
Subjt:  -------YGAYVIGSDQYGSDASIPPGWKSGDWVCPRMGCGVHNYASRMECFKCKIARD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTGGTCAGCAGGAGACTGGATATGCAACGTTTGCCAAAACGTAAATTTCAAGAAAAGAGAAGCATGTCATCGTTGCAGTTACCCCAAGCATGGAGGCCCAGACCC
TTCAACTTACAGTTACATCAAGACAGAGGTCTTGGCTGGAGACTGGTACTGCACCGGCATCAACTGTGGAGCTCACAATTACGCCAGCCGCCCGAACTGCTTTAGATGCG
GTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACGTGATTGGCTCCGATCAATATGGTTCTGATGCAAGCATCCCGCCTGGATGGAAATCTGGAGACTGGGTT
TGTCCTAGAATGGGATGTGGAGTACACAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAATAGCAAGAGATTTCGGTAAGTTTATATCAACTAAAACATTTACATT
TGTTATCCTTATCTGCCACTCAAAAAGTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTGGTCAGCAGGAGACTGGATATGCAACGTTTGCCAAAACGTAAATTTCAAGAAAAGAGAAGCATGTCATCGTTGCAGTTACCCCAAGCATGGAGGCCCAGACCC
TTCAACTTACAGTTACATCAAGACAGAGGTCTTGGCTGGAGACTGGTACTGCACCGGCATCAACTGTGGAGCTCACAATTACGCCAGCCGCCCGAACTGCTTTAGATGCG
GTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACGTGATTGGCTCCGATCAATATGGTTCTGATGCAAGCATCCCGCCTGGATGGAAATCTGGAGACTGGGTT
TGTCCTAGAATGGGATGTGGAGTACACAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAATAGCAAGAGATTTCGGTAAGTTTATATCAACTAAAACATTTACATT
TGTTATCCTTATCTGCCACTCAAAAAGTGGTTAATAAAGGCGTCATTTGATAATCATTTTGGCCCCGTTTGATAACCATTTGGTTTTT
Protein sequenceShow/hide protein sequence
MSWSAGDWICNVCQNVNFKKREACHRCSYPKHGGPDPSTYSYIKTEVLAGDWYCTGINCGAHNYASRPNCFRCGAFKSVYPGDYGAYVIGSDQYGSDASIPPGWKSGDWV
CPRMGCGVHNYASRMECFKCKIARDFGKFISTKTFTFVILICHSKSG