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Sed0025923 (gene) of Chayote v1 genome

Gene IDSed0025923
OrganismSechium edule (Chayote v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG14:6500049..6512109
RNA-Seq ExpressionSed0025923
SyntenySed0025923
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449241.1 PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo]8.7e-13882.62Show/hide
Query:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG
        A  AA SSFI TRLA+    S  G+V+ARF FGKKK+ P                    KK  SSK + DRPLW+PGAKAPEWLDGSLVGDYGFDPFGLG
Subjt:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG

Query:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL
        KPAEYLQY+LDSLDQNLAKN AGD+IGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSYLGQPL
Subjt:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL

Query:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII
        PF++TTLIWIEVLVIGYIEFQRNAEL+PEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII
Subjt:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII

Query:  DSFSS
        D+FSS
Subjt:  DSFSS

XP_022151483.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Momordica charantia]1.9e-14083.55Show/hide
Query:  MAAAT---AAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFD
        MAAAT   AA SSFI TRL D R  S  G+V+ARFSFGKKK  P                      K SSK++ DRPLW+PGAKAPEWLDGSLVGDYGFD
Subjt:  MAAAT---AAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFD

Query:  PFGLGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSY
        PFGLGKPAEYLQY+LDSLDQNLAKN AGD+IGTRFENS+VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSY
Subjt:  PFGLGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSY

Query:  LGQPLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPL
        LGQPLPF++TTLIWIEVLVIGYIEFQRNAEL+PEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPL
Subjt:  LGQPLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPL

Query:  HTTIIDSFSS
        HTTIIDSFSS
Subjt:  HTTIIDSFSS

XP_022931964.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata]2.6e-14284.69Show/hide
Query:  MAAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFG
        MAA +AA SSFI TRLAD R  S  G+V+ARFSFGKKK+                     AKK  SSK++PDRPLW+PGAKAPEWLDGSLVGDYGFDPFG
Subjt:  MAAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFG

Query:  LGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQ
        LGKPAEYLQY+LDSLDQNLAKN AGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTG+TWQDAGKVELVEGSSYLGQ
Subjt:  LGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQ

Query:  PLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT
        PLPF++T LIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT
Subjt:  PLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT

Query:  IIDSFSS
        IID+FSS
Subjt:  IIDSFSS

XP_022966541.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima]1.5e-14284.69Show/hide
Query:  MAAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFG
        MAA +AA SSFI TRLAD R  S  G+V+ARFSFGKKK+                     AKK  SSK++PDRPLW+PGAKAPEWLDGSLVGDYGFDPFG
Subjt:  MAAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFG

Query:  LGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQ
        LGKPAEYLQY+LDSLDQNLAKN AGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTG+TWQDAGKVELVEGSSYLGQ
Subjt:  LGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQ

Query:  PLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT
        PLPF++T LIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT
Subjt:  PLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT

Query:  IIDSFSS
        IID+FSS
Subjt:  IIDSFSS

XP_038882769.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]3.5e-13983.28Show/hide
Query:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG
        A  AA SSFI TRLA+ R  S  G+V+ARF FGKKK+ P                    KK  SSK + DRPLW+PGAKAPEWLDGSLVGDYGFDPFGLG
Subjt:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG

Query:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL
        KPAEYLQY+LDSLDQNLAKN AGD+IGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSYLGQPL
Subjt:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL

Query:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII
        PF++TTLIWIEVLVIGYIEFQRNAEL+PEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII
Subjt:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII

Query:  DSFSS
        D+FSS
Subjt:  DSFSS

TrEMBL top hitse value%identityAlignment
A0A1S3BMH8 Chlorophyll a-b binding protein, chloroplastic4.2e-13882.62Show/hide
Query:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG
        A  AA SSFI TRLA+    S  G+V+ARF FGKKK+ P                    KK  SSK + DRPLW+PGAKAPEWLDGSLVGDYGFDPFGLG
Subjt:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG

Query:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL
        KPAEYLQY+LDSLDQNLAKN AGD+IGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSYLGQPL
Subjt:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL

Query:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII
        PF++TTLIWIEVLVIGYIEFQRNAEL+PEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII
Subjt:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII

Query:  DSFSS
        D+FSS
Subjt:  DSFSS

A0A5D3BBB3 Chlorophyll a-b binding protein, chloroplastic4.2e-13882.62Show/hide
Query:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG
        A  AA SSFI TRLA+    S  G+V+ARF FGKKK+ P                    KK  SSK + DRPLW+PGAKAPEWLDGSLVGDYGFDPFGLG
Subjt:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG

Query:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL
        KPAEYLQY+LDSLDQNLAKN AGD+IGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSYLGQPL
Subjt:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL

Query:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII
        PF++TTLIWIEVLVIGYIEFQRNAEL+PEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII
Subjt:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII

Query:  DSFSS
        D+FSS
Subjt:  DSFSS

A0A6J1DCA5 Chlorophyll a-b binding protein, chloroplastic9.1e-14183.55Show/hide
Query:  MAAAT---AAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFD
        MAAAT   AA SSFI TRL D R  S  G+V+ARFSFGKKK  P                      K SSK++ DRPLW+PGAKAPEWLDGSLVGDYGFD
Subjt:  MAAAT---AAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFD

Query:  PFGLGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSY
        PFGLGKPAEYLQY+LDSLDQNLAKN AGD+IGTRFENS+VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSY
Subjt:  PFGLGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSY

Query:  LGQPLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPL
        LGQPLPF++TTLIWIEVLVIGYIEFQRNAEL+PEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPL
Subjt:  LGQPLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPL

Query:  HTTIIDSFSS
        HTTIIDSFSS
Subjt:  HTTIIDSFSS

A0A6J1EVQ5 Chlorophyll a-b binding protein, chloroplastic1.3e-14284.69Show/hide
Query:  MAAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFG
        MAA +AA SSFI TRLAD R  S  G+V+ARFSFGKKK+                     AKK  SSK++PDRPLW+PGAKAPEWLDGSLVGDYGFDPFG
Subjt:  MAAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFG

Query:  LGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQ
        LGKPAEYLQY+LDSLDQNLAKN AGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTG+TWQDAGKVELVEGSSYLGQ
Subjt:  LGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQ

Query:  PLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT
        PLPF++T LIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT
Subjt:  PLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT

Query:  IIDSFSS
        IID+FSS
Subjt:  IIDSFSS

A0A6J1HPL7 Chlorophyll a-b binding protein, chloroplastic7.4e-14384.69Show/hide
Query:  MAAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFG
        MAA +AA SSFI TRLAD R  S  G+V+ARFSFGKKK+                     AKK  SSK++PDRPLW+PGAKAPEWLDGSLVGDYGFDPFG
Subjt:  MAAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFG

Query:  LGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQ
        LGKPAEYLQY+LDSLDQNLAKN AGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTG+TWQDAGKVELVEGSSYLGQ
Subjt:  LGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQ

Query:  PLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT
        PLPF++T LIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT
Subjt:  PLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTT

Query:  IIDSFSS
        IID+FSS
Subjt:  IIDSFSS

SwissProt top hitse value%identityAlignment
Q01667 Chlorophyll a-b binding protein 6, chloroplastic6.2e-3841.63Show/hide
Query:  WYPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALS
        W PG   P +LDGS  GD+GFDP GLG+ PA                                             L+R++E ELIH RWAMLA  G L 
Subjt:  WYPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALS

Query:  VEWLTGITWQDAGKVELVEG--SSYLGQPLPF-TVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAF
         E L    W  A +   + G  ++YLG P+P+ T+ T++ IE L I ++E QR+ E +PEK+ YPGG  FDPLG ++DP+K   L++ EIK+ RLA++AF
Subjt:  VEWLTGITWQDAGKVELVEG--SSYLGQPLPF-TVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAF

Query:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID
        +GF V Q+A  G GPL N ATHL+DP H  I D
Subjt:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic1.3e-12875.82Show/hide
Query:  AAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGL
        +AA AAASS + TR+A      G G+  A F FGKKKA P                    KK A      DRPLWYPGA +P+WLDGSLVGDYGFDPFGL
Subjt:  AAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGL

Query:  GKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQP
        GKPAEYLQ+++DSLDQNLAKN AGD+IGTR E ++ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELV+GSSYLGQP
Subjt:  GKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQP

Query:  LPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTI
        LPF+++TLIWIEVLVIGYIEFQRNAEL+ EKRLYPGGKFFDPLGLA DPEK   LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTI
Subjt:  LPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTI

Query:  IDSFSS
        ID+FSS
Subjt:  IDSFSS

Q93WD2 Chlorophyll a-b binding protein CP293.3e-6352.51Show/hide
Query:  KKKAGPAKKKASSKRVPDRPLWYPGAKK-KASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYELDSLDQNLAKNSAGDLIG-TRFE
        +KKAG    K + K    +     G +      ++     LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN+ G +    +  
Subjt:  KKKAGPAKKKASSKRVPDRPLWYPGAKK-KASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYELDSLDQNLAKNSAGDLIG-TRFE

Query:  NSEVKS-TPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFTVTTLIWIEVLVIGYIEFQRNAELEPEK
          EV S     PY+EVFGL RFRECELIHGRWAMLA LGAL  E  TG++W +AGKVEL +G+SY G  LPF++T LIWIEV+++G  EF RN+E  PEK
Subjt:  NSEVKS-TPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFTVTTLIWIEVLVIGYIEFQRNAELEPEK

Query:  RLYPGGKFFDPLGLA-EDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWA
        R YPGG  FDPL LA ED E+   L+ AEIKHARLAMV+F G+ VQA  TG+G L + A
Subjt:  RLYPGGKFFDPLGLA-EDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWA

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic1.0e-10468.49Show/hide
Query:  MAAATAAASSFI-ATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPF
        MA  TAAA+S I   R+ D R G+G+ +    FSFGKKK  P  KK  S++V D                  DR +W+PGA  PEWLDGS++GD GFDPF
Subjt:  MAAATAAASSFI-ATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPF

Query:  GLGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLG
        GLGKPAEYLQY+ D LDQNLAKN AGD+IG   E+SE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTGI WQDAGKVELVEGSSYLG
Subjt:  GLGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLG

Query:  QPLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        QPLPF++TTLIWIEVLV+GYIEFQRN+EL+PEKR+YPGG +FDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  QPLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic1.3e-12373.44Show/hide
Query:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG
        +  AAASS + TR+  +   S   +  ARF FG KKA P K K                        + DRPLW+PGAK+PE+LDGSLVGDYGFDPFGLG
Subjt:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG

Query:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL
        KPAEYLQ++LDSLDQNLAKN  G++IGTR E  + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTG+TWQDAGKVELV+GSSYLGQPL
Subjt:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL

Query:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII
        PF+++TLIWIEVLVIGYIEFQRNAEL+ EKRLYPGGKFFDPLGLA DP KK  LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTII
Subjt:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII

Query:  DSFSS
        D+FSS
Subjt:  DSFSS

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II7.2e-10668.49Show/hide
Query:  MAAATAAASSFI-ATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPF
        MA  TAAA+S I   R+ D R G+G+ +    FSFGKKK  P  KK  S++V D                  DR +W+PGA  PEWLDGS++GD GFDPF
Subjt:  MAAATAAASSFI-ATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPF

Query:  GLGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLG
        GLGKPAEYLQY+ D LDQNLAKN AGD+IG   E+SE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTGI WQDAGKVELVEGSSYLG
Subjt:  GLGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLG

Query:  QPLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        QPLPF++TTLIWIEVLV+GYIEFQRN+EL+PEKR+YPGG +FDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  QPLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

AT2G40100.2 light harvesting complex photosystem II1.5e-5862.83Show/hide
Query:  MAAATAAASSFI-ATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPF
        MA  TAAA+S I   R+ D R G+G+ +    FSFGKKK  P  KK  S++V D                  DR +W+PGA  PEWLDGS++GD GFDPF
Subjt:  MAAATAAASSFI-ATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPF

Query:  GLGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVE
        GLGKPAEYLQY+ D LDQNLAKN AGD+IG   E+SE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTGI WQDAGKVE
Subjt:  GLGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II2.4e-6161.39Show/hide
Query:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG
        +  AAASS + TR+  +   S   +  ARF FG KKA P K K                        + DRPLW+PGAK+PE+LDGSLVGDYGFDPFGLG
Subjt:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG

Query:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL
        KPAEYLQ++LDSLDQNLAKN  G++IGTR E  + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTG+TWQDAGKV  +  SS L   L
Subjt:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL

Query:  PF
         F
Subjt:  PF

AT3G08940.2 light harvesting complex photosystem II9.0e-12573.44Show/hide
Query:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG
        +  AAASS + TR+  +   S   +  ARF FG KKA P K K                        + DRPLW+PGAK+PE+LDGSLVGDYGFDPFGLG
Subjt:  AATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLG

Query:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL
        KPAEYLQ++LDSLDQNLAKN  G++IGTR E  + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTG+TWQDAGKVELV+GSSYLGQPL
Subjt:  KPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPL

Query:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII
        PF+++TLIWIEVLVIGYIEFQRNAEL+ EKRLYPGGKFFDPLGLA DP KK  LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTII
Subjt:  PFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII

Query:  DSFSS
        D+FSS
Subjt:  DSFSS

AT5G01530.1 light harvesting complex photosystem II9.3e-13075.82Show/hide
Query:  AAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGL
        +AA AAASS + TR+A      G G+  A F FGKKKA P                    KK A      DRPLWYPGA +P+WLDGSLVGDYGFDPFGL
Subjt:  AAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGL

Query:  GKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQP
        GKPAEYLQ+++DSLDQNLAKN AGD+IGTR E ++ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELV+GSSYLGQP
Subjt:  GKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQP

Query:  LPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTI
        LPF+++TLIWIEVLVIGYIEFQRNAEL+ EKRLYPGGKFFDPLGLA DPEK   LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTI
Subjt:  LPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTI

Query:  IDSFSS
        ID+FSS
Subjt:  IDSFSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCACCGCCGCCGCGTCCTCGTTCATCGCCACCCGCCTCGCCGACGCACGGCGGGGGTCCGGCAAAGGCAAAGTAGAAGCCCGGTTCTCGTTCGGCAAGAA
GAAAGCCGGTCCGGCGAAGAAAAAGGCGTCCTCGAAGAGGGTTCCGGACCGGCCGCTGTGGTACCCGGGAGCGAAGAAAAAGGCGTCCTCGAAGAGGGTTCCGGACCGGC
CGCTGTGGTACCCGGGAGCGAAGGCGCCGGAGTGGCTGGACGGGAGCCTGGTCGGGGACTACGGGTTCGACCCGTTCGGGCTGGGTAAACCGGCGGAGTATTTGCAGTAC
GAATTGGACTCGCTGGACCAGAACTTGGCGAAGAACTCGGCGGGCGATCTAATCGGGACGAGATTTGAGAACTCGGAGGTGAAATCGACGCCGTTTCAGCCGTACACGGA
GGTGTTTGGACTGCAGAGATTTCGTGAGTGTGAACTCATTCATGGACGGTGGGCCATGTTGGCCACTCTCGGCGCTCTCTCGGTTGAGTGGCTCACTGGCATCACTTGGC
AAGACGCTGGAAAAGTAGAATTAGTGGAAGGTTCATCATACCTGGGTCAGCCGCTGCCATTCACCGTAACGACATTGATCTGGATCGAAGTGCTTGTGATTGGATACATC
GAATTCCAAAGAAACGCGGAGTTGGAGCCAGAGAAGAGGTTGTACCCAGGCGGGAAGTTCTTCGACCCATTGGGCCTGGCGGAGGACCCGGAGAAGAAAGTCGTCCTACA
GTTGGCTGAGATCAAGCACGCTCGCCTCGCCATGGTTGCCTTTCTCGGCTTTGCGGTCCAGGCCGCCGTCACCGGCAAAGGCCCGCTCAACAACTGGGCCACCCATTTGA
GCGACCCGCTCCACACCACCATCATCGACTCCTTCTCTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCACCGCCGCCGCGTCCTCGTTCATCGCCACCCGCCTCGCCGACGCACGGCGGGGGTCCGGCAAAGGCAAAGTAGAAGCCCGGTTCTCGTTCGGCAAGAA
GAAAGCCGGTCCGGCGAAGAAAAAGGCGTCCTCGAAGAGGGTTCCGGACCGGCCGCTGTGGTACCCGGGAGCGAAGAAAAAGGCGTCCTCGAAGAGGGTTCCGGACCGGC
CGCTGTGGTACCCGGGAGCGAAGGCGCCGGAGTGGCTGGACGGGAGCCTGGTCGGGGACTACGGGTTCGACCCGTTCGGGCTGGGTAAACCGGCGGAGTATTTGCAGTAC
GAATTGGACTCGCTGGACCAGAACTTGGCGAAGAACTCGGCGGGCGATCTAATCGGGACGAGATTTGAGAACTCGGAGGTGAAATCGACGCCGTTTCAGCCGTACACGGA
GGTGTTTGGACTGCAGAGATTTCGTGAGTGTGAACTCATTCATGGACGGTGGGCCATGTTGGCCACTCTCGGCGCTCTCTCGGTTGAGTGGCTCACTGGCATCACTTGGC
AAGACGCTGGAAAAGTAGAATTAGTGGAAGGTTCATCATACCTGGGTCAGCCGCTGCCATTCACCGTAACGACATTGATCTGGATCGAAGTGCTTGTGATTGGATACATC
GAATTCCAAAGAAACGCGGAGTTGGAGCCAGAGAAGAGGTTGTACCCAGGCGGGAAGTTCTTCGACCCATTGGGCCTGGCGGAGGACCCGGAGAAGAAAGTCGTCCTACA
GTTGGCTGAGATCAAGCACGCTCGCCTCGCCATGGTTGCCTTTCTCGGCTTTGCGGTCCAGGCCGCCGTCACCGGCAAAGGCCCGCTCAACAACTGGGCCACCCATTTGA
GCGACCCGCTCCACACCACCATCATCGACTCCTTCTCTTCTTAGTTAATTTACGTGTTTGTTAAAACTTCACCTTTCAATTATGTGATGAGTTGTAAGTACTTTCATTTT
CATATTATAAGGTTTTCCACAATACCTAGTTATTATTTTTGTTTTGGATGGTGGTTGATTTATATGACTTTATCTAACAAGATTAATATTTTTTTTTTTAAACAAGGGTA
ACCACACCCGTCTTTAGGCCAGAC
Protein sequenceShow/hide protein sequence
MAAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQY
ELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFTVTTLIWIEVLVIGYI
EFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS