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Sed0025928 (gene) of Chayote v1 genome

Gene IDSed0025928
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:1884069..1892102
RNA-Seq ExpressionSed0025928
SyntenySed0025928
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV66766.1 hypothetical protein CFOL_v3_10276 [Cephalotus follicularis]9.9e-0441.98Show/hide
Query:  EAWEPKSVTGQRVQQFRAPVPPSGRNPCTNIPGQGHGRCTLEEEV------DGDGNNFENSGSSVFMAASVANQTQLEEAS
        E W  K +  Q +Q  R PV PSG NPCT IPG+G GRCT E +       D +   F +       A+SVAN+TQ  + S
Subjt:  EAWEPKSVTGQRVQQFRAPVPPSGRNPCTNIPGQGHGRCTLEEEV------DGDGNNFENSGSSVFMAASVANQTQLEEAS

KAA0063581.1 hypothetical protein E6C27_scaffold329G00910 [Cucumis melo var. makuwa]2.5e-0740.57Show/hide
Query:  MAFSVIKTAAALLIVLLCLFEAWEPKSVTGQRV--QQFRAPVPPSGRNPCTNIPGQGHGRCTLEE------EVDGDGNNFENSGSSVFMAASVANQTQLE
        MAFS++KT  A L + L +F+    + + G RV     R PVP S RNPC+ IPG   GRCTL E       V G  + F    +  F AAS+ NQTQ +
Subjt:  MAFSVIKTAAALLIVLLCLFEAWEPKSVTGQRV--QQFRAPVPPSGRNPCTNIPGQGHGRCTLEE------EVDGDGNNFENSGSSVFMAASVANQTQLE

Query:  EASVAN
        ++S+++
Subjt:  EASVAN

KAG6586324.1 hypothetical protein SDJN03_19057, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0943.64Show/hide
Query:  MAFSVIKT-AAALLIVLLCLFEAWEPKSVTGQR-----VQQFRAPVPPSGRNPCTNIPGQGHGRCTLEEEVDGDGNNFENSGSSV--------FMAASVA
        M FSV+KT AAA + +LLC+F     + +TG+R      +  R  VPPSGRNPC+ IPG G GRCTL E  D  G      GSS         F AA++ 
Subjt:  MAFSVIKT-AAALLIVLLCLFEAWEPKSVTGQR-----VQQFRAPVPPSGRNPCTNIPGQGHGRCTLEEEVDGDGNNFENSGSSV--------FMAASVA

Query:  NQTQLEEASV
        N TQ ++ S+
Subjt:  NQTQLEEASV

KGN60782.1 hypothetical protein Csa_019261 [Cucumis sativus]3.6e-0639.82Show/hide
Query:  MAFSVIKTAAALLIVLLCL---------FEAWEPKSVTGQRVQQFRAPVPPSGRNPCTNIPGQGHGRCTLEEEVDGD------GNNFENSGSSVFMAASV
        MAFS++KT A L I L  +          E W P S+        R PVP S RNPC+ IPG   GRCTL E  +GD       + F    +  F AASV
Subjt:  MAFSVIKTAAALLIVLLCL---------FEAWEPKSVTGQRVQQFRAPVPPSGRNPCTNIPGQGHGRCTLEEEVDGD------GNNFENSGSSVFMAASV

Query:  ANQTQLEEASVAN
         NQTQ +++S+++
Subjt:  ANQTQLEEASVAN

XP_021283166.1 uncharacterized protein LOC110415777 [Herrania umbratica]5.8e-0481.48Show/hide
Query:  RAPVPPSGRNPCTNIPGQGHGRCTLEE
        R PVPPSG NPCTNIPG+ HGRCTL E
Subjt:  RAPVPPSGRNPCTNIPGQGHGRCTLEE

TrEMBL top hitse value%identityAlignment
A0A0A0LCX8 Uncharacterized protein3.7e-0484.62Show/hide
Query:  RAPVPPSGRNPCTNIPGQGHGRCTLE
        RAPVPPSGRNPCT IPGQ +GRCTL+
Subjt:  RAPVPPSGRNPCTNIPGQGHGRCTLE

A0A0A0LJ84 Uncharacterized protein1.8e-0639.82Show/hide
Query:  MAFSVIKTAAALLIVLLCL---------FEAWEPKSVTGQRVQQFRAPVPPSGRNPCTNIPGQGHGRCTLEEEVDGD------GNNFENSGSSVFMAASV
        MAFS++KT A L I L  +          E W P S+        R PVP S RNPC+ IPG   GRCTL E  +GD       + F    +  F AASV
Subjt:  MAFSVIKTAAALLIVLLCL---------FEAWEPKSVTGQRVQQFRAPVPPSGRNPCTNIPGQGHGRCTLEEEVDGD------GNNFENSGSSVFMAASV

Query:  ANQTQLEEASVAN
         NQTQ +++S+++
Subjt:  ANQTQLEEASVAN

A0A1Q3BFG1 Uncharacterized protein4.8e-0441.98Show/hide
Query:  EAWEPKSVTGQRVQQFRAPVPPSGRNPCTNIPGQGHGRCTLEEEV------DGDGNNFENSGSSVFMAASVANQTQLEEAS
        E W  K +  Q +Q  R PV PSG NPCT IPG+G GRCT E +       D +   F +       A+SVAN+TQ  + S
Subjt:  EAWEPKSVTGQRVQQFRAPVPPSGRNPCTNIPGQGHGRCTLEEEV------DGDGNNFENSGSSVFMAASVANQTQLEEAS

A0A5A7VCY2 Uncharacterized protein1.2e-0740.57Show/hide
Query:  MAFSVIKTAAALLIVLLCLFEAWEPKSVTGQRV--QQFRAPVPPSGRNPCTNIPGQGHGRCTLEE------EVDGDGNNFENSGSSVFMAASVANQTQLE
        MAFS++KT  A L + L +F+    + + G RV     R PVP S RNPC+ IPG   GRCTL E       V G  + F    +  F AAS+ NQTQ +
Subjt:  MAFSVIKTAAALLIVLLCLFEAWEPKSVTGQRV--QQFRAPVPPSGRNPCTNIPGQGHGRCTLEE------EVDGDGNNFENSGSSVFMAASVANQTQLE

Query:  EASVAN
        ++S+++
Subjt:  EASVAN

A0A6J1A8S9 uncharacterized protein LOC1104157772.8e-0481.48Show/hide
Query:  RAPVPPSGRNPCTNIPGQGHGRCTLEE
        R PVPPSG NPCTNIPG+ HGRCTL E
Subjt:  RAPVPPSGRNPCTNIPGQGHGRCTLEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTTCTGTTATCAAGACCGCAGCTGCGTTACTTATCGTTCTTCTCTGTCTTTTCGAAGCGTGGGAGCCTAAGAGCGTGACCGGACAGCGCGTGCAGCAGTTTCG
AGCTCCCGTGCCTCCTTCCGGAAGAAACCCGTGTACGAATATTCCCGGGCAAGGTCATGGGCGTTGCACGTTGGAGGAGGAGGTAGACGGCGATGGTAACAACTTCGAAA
ACAGCGGTTCCTCGGTCTTCATGGCGGCTTCTGTGGCTAACCAAACTCAGCTTGAGGAGGCTTCTGTGGCTAACCAAACCCAGAAAAATCATTCTTTGAGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
TTCATCTTCTTGCCTTTCTTCCTCTCTTTATAAATATCAACAGAATTTACATTCAAAATTCAATCTTCAATATTCAATATTCAATATTATAGCTTAAACCCCATTGATAC
CAATTCCCAAATCTCCAAACTTCATTTTTTTCATATGGCTTTTTCTGTTATCAAGACCGCAGCTGCGTTACTTATCGTTCTTCTCTGTCTTTTCGAAGCGTGGGAGCCTA
AGAGCGTGACCGGACAGCGCGTGCAGCAGTTTCGAGCTCCCGTGCCTCCTTCCGGAAGAAACCCGTGTACGAATATTCCCGGGCAAGGTCATGGGCGTTGCACGTTGGAG
GAGGAGGTAGACGGCGATGGTAACAACTTCGAAAACAGCGGTTCCTCGGTCTTCATGGCGGCTTCTGTGGCTAACCAAACTCAGCTTGAGGAGGCTTCTGTGGCTAACCA
AACCCAGAAAAATCATTCTTTGAGCTCTTGAACTCATGGTGGAATGGAATATTCTCAATCAAAGGTATTCATGGTGCGAGACAAGATGGCTGGAGGAGGAGCTGTGATCA
TGGAAAACCC
Protein sequenceShow/hide protein sequence
MAFSVIKTAAALLIVLLCLFEAWEPKSVTGQRVQQFRAPVPPSGRNPCTNIPGQGHGRCTLEEEVDGDGNNFENSGSSVFMAASVANQTQLEEASVANQTQKNHSLSS