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Sed0025952 (gene) of Chayote v1 genome

Gene IDSed0025952
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:46239619..46239965
RNA-Seq ExpressionSed0025952
SyntenySed0025952
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057217.1 hypothetical protein E6C27_scaffold280G00510 [Cucumis melo var. makuwa]2.9e-0755.22Show/hide
Query:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQLR--RKIFLQVASKNPVVEPII
        MAGLQYKFFPTDFLYPRP SS  +D  +N V +VVPPK DD T + +  + +    A    VVEPI+
Subjt:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQLR--RKIFLQVASKNPVVEPII

KAG6581666.1 putative galacturonosyltransferase 14, partial [Cucurbita argyrosperma subsp. sororia]2.4e-0956.72Show/hide
Query:  LQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQLRRKIFLQVASKNPVVEPIISRSPN
        LQYKFFPTDFLYPRPPSS   D +DN VS VVPPK+DDS+   + ++    A+  P V+PI++ +PN
Subjt:  LQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQLRRKIFLQVASKNPVVEPIISRSPN

KGN59725.1 hypothetical protein Csa_002570 [Cucumis sativus]1.3e-0753.42Show/hide
Query:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQLRRKIFLQVASKNPVVEPIISRSPNRPE
        MAGLQYKFFPTDFLYPRP SS  +D  +N V +VVPPK DD T + +  I          VEPI+  S N P+
Subjt:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQLRRKIFLQVASKNPVVEPIISRSPNRPE

PIN22382.1 hypothetical protein CDL12_04921 [Handroanthus impetiginosus]1.4e-0437.5Show/hide
Query:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQ------LRRKIFLQVASKNPVVEPIISRSPNRPEF
        MAGLQY+FFPTDF++P PP++A    ++N V  V PPK D++         +  K     +S N      I    NR  F
Subjt:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQ------LRRKIFLQVASKNPVVEPIISRSPNRPEF

TrEMBL top hitse value%identityAlignment
A0A0A0LCI2 Uncharacterized protein6.4e-0853.42Show/hide
Query:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQLRRKIFLQVASKNPVVEPIISRSPNRPE
        MAGLQYKFFPTDFLYPRP SS  +D  +N V +VVPPK DD T + +  I          VEPI+  S N P+
Subjt:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQLRRKIFLQVASKNPVVEPIISRSPNRPE

A0A2G9HXY2 Uncharacterized protein6.6e-0537.5Show/hide
Query:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQ------LRRKIFLQVASKNPVVEPIISRSPNRPEF
        MAGLQY+FFPTDF++P PP++A    ++N V  V PPK D++         +  K     +S N      I    NR  F
Subjt:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQ------LRRKIFLQVASKNPVVEPIISRSPNRPEF

A0A5A7URF0 Uncharacterized protein1.4e-0755.22Show/hide
Query:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQLR--RKIFLQVASKNPVVEPII
        MAGLQYKFFPTDFLYPRP SS  +D  +N V +VVPPK DD T + +  + +    A    VVEPI+
Subjt:  MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQLR--RKIFLQVASKNPVVEPII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGTCTTCAATACAAATTCTTCCCCACCGATTTCCTCTACCCTCGTCCGCCTTCCTCCGCCGCCACCGACGCCTCCGATAACACCGTATCGGCCGTCGTTCCCCC
GAAAACCGACGATTCCACGGGACAGCTCCGCCGCAAAATCTTCCTGCAGGTTGCCAGTAAGAACCCTGTCGTCGAACCCATCATCTCTCGGAGCCCCAACCGACCCGAAT
TCTAG
mRNA sequenceShow/hide mRNA sequence
ATCTTCTTCTTCTTCTTCTTCCATGGCAGGTCTTCAATACAAATTCTTCCCCACCGATTTCCTCTACCCTCGTCCGCCTTCCTCCGCCGCCACCGACGCCTCCGATAACA
CCGTATCGGCCGTCGTTCCCCCGAAAACCGACGATTCCACGGGACAGCTCCGCCGCAAAATCTTCCTGCAGGTTGCCAGTAAGAACCCTGTCGTCGAACCCATCATCTCT
CGGAGCCCCAACCGACCCGAATTCTAGTGCCACTTTTCACCCGAGAATTTGTGCTCTGTTTTTTTGTCTTTTTTTTTTTTTTTAATTTTTAATTTTGTGTTCAATTTTCT
TGCGATTCCGATTGGTG
Protein sequenceShow/hide protein sequence
MAGLQYKFFPTDFLYPRPPSSAATDASDNTVSAVVPPKTDDSTGQLRRKIFLQVASKNPVVEPIISRSPNRPEF