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Sed0025963 (gene) of Chayote v1 genome

Gene IDSed0025963
OrganismSechium edule (Chayote v1)
DescriptionS-protein homolog
Genome locationLG05:45798943..45799383
RNA-Seq ExpressionSed0025963
SyntenySed0025963
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026247.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]2.9e-3854.23Show/hide
Query:  IFLLLVIVALGRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESK
        I L LV+V   +A   ++  PPP ++++YIHV+N L  N  L+VHC+SKDDDLG  HLA+ GDD+ WNF+ N W +TLFWC LEK +A VSFESFW ESK
Subjt:  IFLLLVIVALGRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESK

Query:  TFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW
        + WL  RC       TC W AKDDGIYL+N+P  + E +H W
Subjt:  TFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW

XP_022933268.1 S-protein homolog 1-like [Cucurbita moschata]7.5e-3955.48Show/hide
Query:  MKCTIFLLLVIVALGRAETSKIVAPP-PISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFW
        +K  +   L  VAL  A+  ++  PP   S++YIHVVN L  N+ LLVHC+SKDDDLG  HL + GDD+ WNF+ N W +TLFWC +E PDA VSFESFW
Subjt:  MKCTIFLLLVIVALGRAETSKIVAPP-PISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFW

Query:  YESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW
         ES+  WL  RC  GT + TC W AKDDGIYL+N    V ELIH W
Subjt:  YESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW

XP_022933333.1 S-protein homolog 1-like [Cucurbita moschata]2.0e-3956.16Show/hide
Query:  MKCTIFLLLVIVALGRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFW
        +K  +   L  VAL  A+  ++  PPP  S++YIHVVN L   + LLVHC+SKDDDLG  HL + GDD+ WNF+ N W +TLFWC LE PDA VSFESFW
Subjt:  MKCTIFLLLVIVALGRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFW

Query:  YESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW
         ES+  WL  RC  GT + TC W AKDDGIYL+N    V ELIH W
Subjt:  YESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW

XP_022991767.1 S-protein homolog 74-like [Cucurbita maxima]2.6e-3955.86Show/hide
Query:  MKCTIFLLLVIVALGRAETSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWY
        +K  + LLL +VA   A+   I+  P  S++Y+HV N L   + L VHC+SKDDDLGI HL + GDDF WNF+ N W +TLFWC LE+PDA V+FE+FW 
Subjt:  MKCTIFLLLVIVALGRAETSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWY

Query:  ESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW
        ESK  WL  RC +GT   TC WIAKDDGIYL N P    ELIH W
Subjt:  ESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW

XP_038896433.1 S-protein homolog 1-like [Benincasa hispida]2.2e-3855.24Show/hide
Query:  IFLLLVIVAL-GRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYES
        +FL L+  AL G  +  ++  PPP +S++YIH+VN L     ++VHC+SKDDDLG  HL + GDD+ WNF  N W +TLFWC LEKPDA VSFE FW ES
Subjt:  IFLLLVIVAL-GRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYES

Query:  KTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW
        K+ WL  RC  GT   TC W AKDDGIYL+N+P  V E +H W
Subjt:  KTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW

TrEMBL top hitse value%identityAlignment
A0A5A7SNG3 S-protein homolog1.4e-3854.23Show/hide
Query:  IFLLLVIVALGRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESK
        I L LV+V   +A   ++  PPP ++++YIHV+N L  N  L+VHC+SKDDDLG  HLA+ GDD+ WNF+ N W +TLFWC LEK +A VSFESFW ESK
Subjt:  IFLLLVIVALGRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESK

Query:  TFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW
        + WL  RC       TC W AKDDGIYL+N+P  + E +H W
Subjt:  TFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW

A0A6J1EZA2 S-protein homolog1.4e-3855.48Show/hide
Query:  MKCTIFLLLVIVALGRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFW
        +K  +   L  VAL  A+  ++  PPP  S++YIHVVN L   + LLVHC+SKDDDL   HL + GDD+ WNF+ N W +TLFWC LE PDA VSFESFW
Subjt:  MKCTIFLLLVIVALGRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFW

Query:  YESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW
         ES+  WL  RC  GT + TC W AKDDGIYL+N    V ELIH W
Subjt:  YESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW

A0A6J1F497 S-protein homolog3.6e-3955.48Show/hide
Query:  MKCTIFLLLVIVALGRAETSKIVAPP-PISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFW
        +K  +   L  VAL  A+  ++  PP   S++YIHVVN L  N+ LLVHC+SKDDDLG  HL + GDD+ WNF+ N W +TLFWC +E PDA VSFESFW
Subjt:  MKCTIFLLLVIVALGRAETSKIVAPP-PISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFW

Query:  YESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW
         ES+  WL  RC  GT + TC W AKDDGIYL+N    V ELIH W
Subjt:  YESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW

A0A6J1F4G4 S-protein homolog9.6e-4056.16Show/hide
Query:  MKCTIFLLLVIVALGRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFW
        +K  +   L  VAL  A+  ++  PPP  S++YIHVVN L   + LLVHC+SKDDDLG  HL + GDD+ WNF+ N W +TLFWC LE PDA VSFESFW
Subjt:  MKCTIFLLLVIVALGRAETSKIVAPPP-ISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFW

Query:  YESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW
         ES+  WL  RC  GT + TC W AKDDGIYL+N    V ELIH W
Subjt:  YESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW

A0A6J1JMS5 S-protein homolog1.2e-3955.86Show/hide
Query:  MKCTIFLLLVIVALGRAETSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWY
        +K  + LLL +VA   A+   I+  P  S++Y+HV N L   + L VHC+SKDDDLGI HL + GDDF WNF+ N W +TLFWC LE+PDA V+FE+FW 
Subjt:  MKCTIFLLLVIVALGRAETSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWY

Query:  ESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW
        ESK  WL  RC +GT   TC WIAKDDGIYL N P    ELIH W
Subjt:  ESKTFWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLW

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 11.1e-1938.58Show/hide
Query:  TSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDDGTDIQ
        T++ +  P IS+W + VVN L    +L +HCKSK+DDLG  +L    + F WNF  N+ HST FWCY+ K +  ++   FW +     L  RC      +
Subjt:  TSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDDGTDIQ

Query:  TCFWIAKDDGIYLKNIPKQVSELIHLW
         C W AK DG+YL N       L   W
Subjt:  TCFWIAKDDGIYLKNIPKQVSELIHLW

O23020 S-protein homolog 55.8e-1035.92Show/hide
Query:  PPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDDGTDIQTCFWIAK
        PP  +  +  +  L G   L +HCKSK DDLGI H+     ++H+ F+ N+W STLF+C  +      SF+   Y+++    I  CDD      C W  K
Subjt:  PPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDDGTDIQTCFWIAK

Query:  DDG
         DG
Subjt:  DDG

P0DN92 S-protein homolog 244.5e-1032.31Show/hide
Query:  CTIFLL-LVIVALGRAETSKI-VAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWY
        C+IF++ +V+++L  +E  +I  A  PI      V  +   +  L +HCKS+DDDLG  H+   G+ F W F  N  +STL++C   +   K      + 
Subjt:  CTIFLL-LVIVALGRAETSKI-VAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWY

Query:  ESKTFWLIRRCDDGTDIQTCFWIAKDDGIY
         ++ F+   RC        C W A+ DGIY
Subjt:  ESKTFWLIRRCDDGTDIQTCFWIAKDDGIY

Q2HQ46 S-protein homolog 743.9e-2242.5Show/hide
Query:  LGRAETSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDD
        L R  T++ +  P IS+W + V N L    +L +HCKSK++DLG  +L  + D F WNF  N+ HSTLFWCY+ K D  ++ + FW +     L  RC  
Subjt:  LGRAETSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDD

Query:  GTDIQTCFWIAKDDGIYLKN
          D + C W AK+DG+YL N
Subjt:  GTDIQTCFWIAKDDGIYLKN

Q40975 Self-incompatibility protein S14.0e-1130Show/hide
Query:  IFLLLVIVALGRAETSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKT
        IF ++V+++   +++S      P+ +  + ++NR     S+ +HC+SKD+DL  Q +   G D  ++FR + +H+T F+C L+  D +  F  + Y++K 
Subjt:  IFLLLVIVALGRAETSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKT

Query:  FWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHL
             R DDG     C W   DDG+Y  +   Q+ ++ HL
Subjt:  FWLIRRCDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHL

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family4.1e-1135.92Show/hide
Query:  PPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDDGTDIQTCFWIAK
        PP  +  +  +  L G   L +HCKSK DDLGI H+     ++H+ F+ N+W STLF+C  +      SF+   Y+++    I  CDD      C W  K
Subjt:  PPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDDGTDIQTCFWIAK

Query:  DDG
         DG
Subjt:  DDG

AT3G26880.1 Plant self-incompatibility protein S1 family2.7e-1039.08Show/hide
Query:  LLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEK-PDAKVSFESFWYESKTFWLIRRCDDGTDIQTCFWIAKDDGIY
        L VHCKSK++D+G+++L  +G+   ++F+TN W +T FWC L K PD K       Y++   +      DG+      W+A+DDGIY
Subjt:  LLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEK-PDAKVSFESFWYESKTFWLIRRCDDGTDIQTCFWIAKDDGIY

AT4G16295.1 S-protein homologue 17.5e-2138.58Show/hide
Query:  TSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDDGTDIQ
        T++ +  P IS+W + VVN L    +L +HCKSK+DDLG  +L    + F WNF  N+ HST FWCY+ K +  ++   FW +     L  RC      +
Subjt:  TSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDDGTDIQ

Query:  TCFWIAKDDGIYLKNIPKQVSELIHLW
         C W AK DG+YL N       L   W
Subjt:  TCFWIAKDDGIYLKNIPKQVSELIHLW

AT4G29035.1 Plant self-incompatibility protein S1 family2.8e-2342.5Show/hide
Query:  LGRAETSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDD
        L R  T++ +  P IS+W + V N L    +L +HCKSK++DLG  +L  + D F WNF  N+ HSTLFWCY+ K D  ++ + FW +     L  RC  
Subjt:  LGRAETSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRRCDD

Query:  GTDIQTCFWIAKDDGIYLKN
          D + C W AK+DG+YL N
Subjt:  GTDIQTCFWIAKDDGIYLKN

AT5G04350.1 Plant self-incompatibility protein S1 family4.9e-1235.79Show/hide
Query:  NRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEK-PDAKVSFESFWYESKTFWLIRRCDDGTDIQTCFWIAKDDGIY
        N+L  +  L VHC+SKDDDLG +H+  +G D+ + F  NIW +T F C +++ P+ K   +   YE+     +          +C WI ++DGIY
Subjt:  NRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEK-PDAKVSFESFWYESKTFWLIRRCDDGTDIQTCFWIAKDDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTGTACAATATTTTTGTTGCTTGTCATAGTTGCTTTGGGAAGGGCTGAAACATCAAAGATTGTTGCACCACCGCCAATTTCTAAGTGGTACATTCATGTGGTTAA
TAGGCTACGCGGCAACGTTTCTTTGCTCGTGCATTGCAAATCCAAAGACGATGATTTGGGGATTCAACATTTAGCTCATGTTGGAGATGATTTTCATTGGAACTTTAGAA
CCAATATTTGGCATTCGACTCTCTTTTGGTGTTACTTGGAAAAGCCCGATGCTAAAGTCTCATTTGAAAGCTTTTGGTACGAGTCTAAGACCTTTTGGCTCATACGAAGG
TGCGACGATGGAACTGATATTCAAACTTGTTTTTGGATAGCGAAAGACGATGGAATTTACCTAAAAAATATTCCCAAACAAGTCAGTGAATTGATACACTTGTGGCATTG
A
mRNA sequenceShow/hide mRNA sequence
ATGAAGTGTACAATATTTTTGTTGCTTGTCATAGTTGCTTTGGGAAGGGCTGAAACATCAAAGATTGTTGCACCACCGCCAATTTCTAAGTGGTACATTCATGTGGTTAA
TAGGCTACGCGGCAACGTTTCTTTGCTCGTGCATTGCAAATCCAAAGACGATGATTTGGGGATTCAACATTTAGCTCATGTTGGAGATGATTTTCATTGGAACTTTAGAA
CCAATATTTGGCATTCGACTCTCTTTTGGTGTTACTTGGAAAAGCCCGATGCTAAAGTCTCATTTGAAAGCTTTTGGTACGAGTCTAAGACCTTTTGGCTCATACGAAGG
TGCGACGATGGAACTGATATTCAAACTTGTTTTTGGATAGCGAAAGACGATGGAATTTACCTAAAAAATATTCCCAAACAAGTCAGTGAATTGATACACTTGTGGCATTG
A
Protein sequenceShow/hide protein sequence
MKCTIFLLLVIVALGRAETSKIVAPPPISKWYIHVVNRLRGNVSLLVHCKSKDDDLGIQHLAHVGDDFHWNFRTNIWHSTLFWCYLEKPDAKVSFESFWYESKTFWLIRR
CDDGTDIQTCFWIAKDDGIYLKNIPKQVSELIHLWH