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Sed0026010 (gene) of Chayote v1 genome

Gene IDSed0026010
OrganismSechium edule (Chayote v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationLG03:46113879..46118828
RNA-Seq ExpressionSed0026010
SyntenySed0026010
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586044.1 hypothetical protein SDJN03_18777, partial [Cucurbita argyrosperma subsp. sororia]8.0e-4087.25Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA
        MAMYIRIKR KTTYFIQCDPIETTLNIKQKLESL++Q +VDQRLILV SGEVL+DSKTLADQKVENDAVVAL+LRKDDNEFEE+DIV  NDFYQSR+AD+
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA

Query:  GN
        GN
Subjt:  GN

KAG7020821.1 hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-4086.41Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA
        MAMYIRIKR KTTYFIQCDPIETTLNIKQKLESL++Q +VDQRLILV SGEVL+DSKTLADQKVENDAVVAL+LRKDDNEFEE++IV  NDFYQSR+AD+
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA

Query:  GNW
        GNW
Subjt:  GNW

XP_008452565.1 PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]1.2e-4086.41Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA
        MAMYIRIKR KTTYFIQCDPIETTLNIKQKLESL++Q VVDQRLIL+ SGEVL+DSKTLADQKVENDAVVAL+LRK+DN+FEE++IV PNDFYQSRDAD+
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA

Query:  GNW
        GNW
Subjt:  GNW

XP_022937980.1 uncharacterized protein LOC111444204 [Cucurbita moschata]4.2e-4187.38Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA
        MAMYIRIKR KTTYFIQCDPIETTLNIKQKLESL++Q +VDQRLILV SGEVL+DSKTLADQKVENDAVVAL+LRKDDNEFEE+DIV  NDFYQSR+AD+
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA

Query:  GNW
        GNW
Subjt:  GNW

XP_038889494.1 uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]2.9e-4289.32Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA
        MAMYIRIKR KTTYFIQCDPIETTLNIKQKLESL++Q VVDQRLILV SGEVL+DSKTLADQKVENDAVVAL+LRKDDN+FEE+DI+ PNDFYQSRDADA
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA

Query:  GNW
        GNW
Subjt:  GNW

TrEMBL top hitse value%identityAlignment
A0A1S3BTJ1 uncharacterized protein LOC103493547 isoform X16.0e-4186.41Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA
        MAMYIRIKR KTTYFIQCDPIETTLNIKQKLESL++Q VVDQRLIL+ SGEVL+DSKTLADQKVENDAVVAL+LRK+DN+FEE++IV PNDFYQSRDAD+
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA

Query:  GNW
        GNW
Subjt:  GNW

A0A1S4DYF9 uncharacterized protein LOC103493547 isoform X21.9e-3986.41Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA
        MAMYIRIKR KTTYFIQCDPIETTLNIKQKLESL++Q VVDQRLIL+ SGEVL+DSKTLADQKVENDAVVAL+LRK DN+FEE++IV PNDFYQSRDAD+
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA

Query:  GNW
        GNW
Subjt:  GNW

A0A5A7UM04 Ubiquitin5.1e-4086.14Show/hide
Query:  MYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADAGN
        MYIRIKR KTTYFIQCDPIETTLNIKQKLESL++Q VVDQRLIL+ SGEVL+DSKTLADQKVENDAVVAL+LRK+DN+FEE++IV PNDFYQSRDAD+GN
Subjt:  MYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADAGN

Query:  W
        W
Subjt:  W

A0A6J1FIC7 uncharacterized protein LOC1114442042.1e-4187.38Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA
        MAMYIRIKR KTTYFIQCDPIETTLNIKQKLESL++Q +VDQRLILV SGEVL+DSKTLADQKVENDAVVAL+LRKDDNEFEE+DIV  NDFYQSR+AD+
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA

Query:  GNW
        GNW
Subjt:  GNW

A0A6J1HY58 uncharacterized protein LOC1114685512.1e-4187.38Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA
        MAMYIRIKR KTTYFIQCDPIETTLNIKQKLESL++Q +VDQRLILV SGEVL+DSKTLADQKVENDAVVAL+LRKDDNEFEE+DIV  NDFYQSR+AD+
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADA

Query:  GNW
        GNW
Subjt:  GNW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57860.1 Ubiquitin-like superfamily protein7.2e-3171.74Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +L+EQ V +QRL+L+ + EVL+DSK+LADQKVENDAVVAL+L+KDDNEFE+V+I  P DF
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDF

AT5G57860.2 Ubiquitin-like superfamily protein7.2e-3171.74Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +L+EQ V +QRL+L+ + EVL+DSK+LADQKVENDAVVAL+L+KDDNEFE+V+I  P DF
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDF

AT5G57860.3 Ubiquitin-like superfamily protein7.2e-3171.74Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +L+EQ V +QRL+L+ + EVL+DSK+LADQKVENDAVVAL+L+KDDNEFE+V+I  P DF
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDF

AT5G57860.4 Ubiquitin-like superfamily protein1.8e-1868.18Show/hide
Query:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVEN
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +L+EQ V +QRL+L+ + EVL+DSK+LADQKV +
Subjt:  MAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVDQRLILVESGEVLKDSKTLADQKVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAAGGTCGGTAAGATTAGTCCAACCGAGTTTTCCAAACGCTGCGAGCAAAGTCGTCCAAAGTGCTTGCGCTCATTCCTTTTCATTTCATCGGAGCAGACCGGACG
AACTCTCCCAAGCAAGACACGTCTCGCCGATTCCCAGACAGCGGCATTGGAGGCAGGATTTATCGAATTGTTGATCCATTTGTTCTTGTTTTTCAAGATGGCCATGTATA
TCCGAATCAAGCGCCAAAAGACAACGTACTTTATCCAATGCGATCCAATTGAGACAACTTTAAATATCAAGCAAAAATTAGAGTCCCTTCTGGAGCAATCAGTAGTTGAT
CAGCGCTTGATCCTTGTGGAGAGTGGGGAAGTGTTGAAGGATTCAAAGACACTTGCTGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTCTCATTGCGAAAAGATGA
TAATGAGTTCGAGGAGGTTGACATTGTCGGTCCAAACGATTTCTACCAATCTCGTGATGCGGATGCTGGCAATTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAAGGTCGGTAAGATTAGTCCAACCGAGTTTTCCAAACGCTGCGAGCAAAGTCGTCCAAAGTGCTTGCGCTCATTCCTTTTCATTTCATCGGAGCAGACCGGACG
AACTCTCCCAAGCAAGACACGTCTCGCCGATTCCCAGACAGCGGCATTGGAGGCAGGATTTATCGAATTGTTGATCCATTTGTTCTTGTTTTTCAAGATGGCCATGTATA
TCCGAATCAAGCGCCAAAAGACAACGTACTTTATCCAATGCGATCCAATTGAGACAACTTTAAATATCAAGCAAAAATTAGAGTCCCTTCTGGAGCAATCAGTAGTTGAT
CAGCGCTTGATCCTTGTGGAGAGTGGGGAAGTGTTGAAGGATTCAAAGACACTTGCTGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTCTCATTGCGAAAAGATGA
TAATGAGTTCGAGGAGGTTGACATTGTCGGTCCAAACGATTTCTACCAATCTCGTGATGCGGATGCTGGCAATTGGTAAGGATTGAAAATTTGATTTTAGTGTGGGTAGT
ATATGATGATCAGGCATCAATCTTGTGGGTGTACTATTGAAATAACTTTTCTAGCAGTTGGATGAAATTGAAAATGATGGATAAGAAAGTATACTCTATGCCGGATTAGA
TATTTGATAGCTTCATGCATGCTCTTTGTTACCCTGTCAAGAGTTCTCCAAAAGTTGCATTGGTGATTTAAGCATTATTTTGAAACAAAGATAATCACGCCGGTCTTTAG
GTTAGACACATCCATGCATTGTTACTAGTACTAAAATGAGTCGAAGATTTTGATAGGACTTTTTTGATTGGCC
Protein sequenceShow/hide protein sequence
MFKVGKISPTEFSKRCEQSRPKCLRSFLFISSEQTGRTLPSKTRLADSQTAALEAGFIELLIHLFLFFKMAMYIRIKRQKTTYFIQCDPIETTLNIKQKLESLLEQSVVD
QRLILVESGEVLKDSKTLADQKVENDAVVALSLRKDDNEFEEVDIVGPNDFYQSRDADAGNW