; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026018 (gene) of Chayote v1 genome

Gene IDSed0026018
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:7555063..7557354
RNA-Seq ExpressionSed0026018
SyntenySed0026018
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140781.1 uncharacterized protein LOC101217506 [Cucumis sativus]3.2e-4374.59Show/hide
Query:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQ ++T P WTN+KH+HFLNS+EASFVRSM  N  HRR LRLDRLLPD+ADSTLDSP  HT NHP+SG  RI+GRS+RRSRRISS PYTS QDQVV
Subjt:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKKLVEDENEKDHPISPVN
        PQMEK+ VEDE+E+DHP+SP+N
Subjt:  PQMEKKLVEDENEKDHPISPVN

XP_008439192.1 PREDICTED: uncharacterized protein LOC103484063 [Cucumis melo]4.2e-4374.59Show/hide
Query:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQ ++T P WTN+KH+HFLNSMEASFVRSM  N  HRRRLRLDRLLPD+ADSTLDSPL HT NHP+SG  R++GRS+RRSRR SS PY+S QDQVV
Subjt:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKKLVEDENEKDHPISPVN
        PQMEK  VEDE+E+DHP+SP+N
Subjt:  PQMEKKLVEDENEKDHPISPVN

XP_022945615.1 uncharacterized protein LOC111449801 [Cucurbita moschata]1.8e-4173.98Show/hide
Query:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDS-PLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQV
        M SHVQ S+T PFWT++KHVHFLNSMEASFVRSM  N HHRRRLRL+RLLPD+ADSTLDS   Y   +HP++GGGR+DGRSSRRSRRISSLP  SIQDQV
Subjt:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDS-PLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQV

Query:  VPQMEKKLVEDENEKDHPISPVN
        VPQME +  E+E+E+DHP SP+N
Subjt:  VPQMEKKLVEDENEKDHPISPVN

XP_022984699.1 uncharacterized protein LOC111482903 isoform X1 [Cucurbita maxima]7.9e-4274.59Show/hide
Query:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQ SET+PFWTN+KH+HFLNSMEASFVRSM  N +HRRRLRLDR L D+ADSTLDSP  +   H  S G R+DGRSSRRSRRI SLP+TSIQDQVV
Subjt:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKKLVEDENEKDHPISPVN
        PQME++ VEDE+E+DHP+SPVN
Subjt:  PQMEKKLVEDENEKDHPISPVN

XP_023542542.1 uncharacterized protein LOC111802424 [Cucurbita pepo subsp. pepo]1.8e-4173.98Show/hide
Query:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDS-PLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQV
        M SHVQ S+T PFWT++KHVHFLNSMEASFVRSM  N HHRRRLRL+RLLPD+ADSTLDS   Y   +HP++GGGR+DGRSSRRSRRISSLP  SIQDQV
Subjt:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDS-PLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQV

Query:  VPQMEKKLVEDENEKDHPISPVN
        VPQME +  E+E+E+DHP SP+N
Subjt:  VPQMEKKLVEDENEKDHPISPVN

TrEMBL top hitse value%identityAlignment
A0A0A0L5V0 Uncharacterized protein1.6e-4374.59Show/hide
Query:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQ ++T P WTN+KH+HFLNS+EASFVRSM  N  HRR LRLDRLLPD+ADSTLDSP  HT NHP+SG  RI+GRS+RRSRRISS PYTS QDQVV
Subjt:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKKLVEDENEKDHPISPVN
        PQMEK+ VEDE+E+DHP+SP+N
Subjt:  PQMEKKLVEDENEKDHPISPVN

A0A1S3AYV4 uncharacterized protein LOC1034840632.0e-4374.59Show/hide
Query:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQ ++T P WTN+KH+HFLNSMEASFVRSM  N  HRRRLRLDRLLPD+ADSTLDSPL HT NHP+SG  R++GRS+RRSRR SS PY+S QDQVV
Subjt:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKKLVEDENEKDHPISPVN
        PQMEK  VEDE+E+DHP+SP+N
Subjt:  PQMEKKLVEDENEKDHPISPVN

A0A6J1G1G2 uncharacterized protein LOC1114498018.5e-4273.98Show/hide
Query:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDS-PLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQV
        M SHVQ S+T PFWT++KHVHFLNSMEASFVRSM  N HHRRRLRL+RLLPD+ADSTLDS   Y   +HP++GGGR+DGRSSRRSRRISSLP  SIQDQV
Subjt:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDS-PLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQV

Query:  VPQMEKKLVEDENEKDHPISPVN
        VPQME +  E+E+E+DHP SP+N
Subjt:  VPQMEKKLVEDENEKDHPISPVN

A0A6J1J606 uncharacterized protein LOC111482903 isoform X23.2e-4174.59Show/hide
Query:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQ SET+PFWTN+KH+HFLNSMEASFVRSM  N +HRRRLRLDR L D+ADSTLDSP  +   H S  G R+DGRSSRRSRRI SLP+TSIQDQVV
Subjt:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKKLVEDENEKDHPISPVN
        PQME++ VEDE+E+DHP+SPVN
Subjt:  PQMEKKLVEDENEKDHPISPVN

A0A6J1JBA6 uncharacterized protein LOC111482903 isoform X13.8e-4274.59Show/hide
Query:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV
        M SHVQ SET+PFWTN+KH+HFLNSMEASFVRSM  N +HRRRLRLDR L D+ADSTLDSP  +   H  S G R+DGRSSRRSRRI SLP+TSIQDQVV
Subjt:  MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVV

Query:  PQMEKKLVEDENEKDHPISPVN
        PQME++ VEDE+E+DHP+SPVN
Subjt:  PQMEKKLVEDENEKDHPISPVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTCGCACGTGCAACGGAGCGAAACGAGACCGTTTTGGACGAATCAGAAGCACGTGCACTTCTTGAACTCCATGGAAGCTTCTTTCGTCCGATCAATGCTCGGAAA
CCACCACCATCGCCGCCGTCTACGGCTGGACCGCCTCCTGCCGGACTCCGCCGACTCAACCCTAGATTCACCTCTCTATCACACAATAAACCATCCTTCTTCCGGAGGTG
GCAGAATCGACGGTCGATCTAGCAGGAGATCGAGGAGGATATCATCTCTGCCATACACTTCAATTCAAGATCAGGTGGTCCCACAGATGGAAAAGAAACTAGTTGAGGAT
GAAAATGAGAAAGATCATCCCATTTCACCTGTCAACTGA
mRNA sequenceShow/hide mRNA sequence
AACCCACCCAAATTTTGATTTTATTTTTTCTTTGTAAAAATAAAATAAAATAAAATCTTTCTTCTTCTTCATCTTCCAATTCCTCTGGTTAATTTTTATTTTCTTGGTAA
ACCCTAGCCATGCCGTCGCACGTGCAACGGAGCGAAACGAGACCGTTTTGGACGAATCAGAAGCACGTGCACTTCTTGAACTCCATGGAAGCTTCTTTCGTCCGATCAAT
GCTCGGAAACCACCACCATCGCCGCCGTCTACGGCTGGACCGCCTCCTGCCGGACTCCGCCGACTCAACCCTAGATTCACCTCTCTATCACACAATAAACCATCCTTCTT
CCGGAGGTGGCAGAATCGACGGTCGATCTAGCAGGAGATCGAGGAGGATATCATCTCTGCCATACACTTCAATTCAAGATCAGGTGGTCCCACAGATGGAAAAGAAACTA
GTTGAGGATGAAAATGAGAAAGATCATCCCATTTCACCTGTCAACTGAGATTATTAGTATTATTATTATTATGCAATTTTCCCCACTTTATTTCTTGTTTAATTTCCTTT
TCAAGTTTTCTTTTAGTCTTTAATGACGGTGTGAAAAAGGGTTTAATTGGAAATTAGTTAATTTGATATGTTGGTAGGATTAATTTTCGAC
Protein sequenceShow/hide protein sequence
MPSHVQRSETRPFWTNQKHVHFLNSMEASFVRSMLGNHHHRRRLRLDRLLPDSADSTLDSPLYHTINHPSSGGGRIDGRSSRRSRRISSLPYTSIQDQVVPQMEKKLVED
ENEKDHPISPVN