CuGenDBv2

Gene ID	Sed0026037
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG10:8368924..8369659
RNA-Seq Expression	Sed0026037
Synteny	Sed0026037
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6603917.1 hypothetical protein SDJN03_04526, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-54

68.85

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Query:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------
        ATSLH FL SKPPL TI+P        NQ+FF  SLR +QP  IKPI+A  TD    G+  P QVPP +TPPE V+VRFRKRSRRRSK+ESE+       
Subjt:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------

Query:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG
          R A VEIASKK KKWEEM +AEK  ELY+GEKGLLFW+NKFAYASIFIMIG WI+FRFVGPSLNLYQLDT PLSPTSIFKG
Subjt:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

XP_004135030.1 uncharacterized protein LOC101202736 [Cucumis sativus]

2.1e-53

67.22

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Query:  SLHPFLISKPPLSTIN-----PCNQI-FFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE---------R
        SLH  L SKPPLSTIN     P +QI  FF +LR ++P  IKPI+A GTD    G+  P QVPPE+TPPE VEVRFRKRSRRRSK+E E+         R
Subjt:  SLHPFLISKPPLSTIN-----PCNQI-FFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE---------R

Query:  AARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG
         A  E+ S K KKWEEMS+AEK ME+Y+GEKGLLFW+NKFAYASIFIMIG WI+FRFVGPSLNLYQLDT PLSPTS+FKG
Subjt:  AARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

XP_022950633.1 uncharacterized protein LOC111453672 [Cucurbita moschata]

2.5e-54

68.85

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Query:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------
        ATSLH FL SKPPL TI+P        NQ+FF  SLR +QP  IKPI+A  TD    G+  P QVPP +TPPE V+VRFRKRSRRRSK+ESE+       
Subjt:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------

Query:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG
          R A VEIASKK KKWEEM +AEK  ELY+GEKGLLFW+NKFAYASIFIMIG WI+FRFVGPSLNLYQLDT PLSPTSIFKG
Subjt:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

XP_022979054.1 uncharacterized protein LOC111478809 [Cucurbita maxima]

2.8e-53

67.76

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Query:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------
        +TSLH FL S+PPL TI P        NQ+FF  SLR +QP  IKPI+A  TD    G+  P QVPP +TPPE V+VRFRKRSRRRSK+ESE+       
Subjt:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------

Query:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG
          R A VEIASKK KKWEEM +AEK  ELY+GEKGLLFW+NKFAYASIFIMIG WI+FRFVGPSLNLYQLDT PLSPTSIFKG
Subjt:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

XP_023544554.1 uncharacterized protein LOC111804097 [Cucurbita pepo subsp. pepo]

2.5e-54

68.85

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Query:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------
        ATSLH FL SKPPL TI+P        NQ+FF  SLR +QP  IKPI+A  TD    G+  P QVPP +TPPE V+VRFRKRSRRRSK+ESE+       
Subjt:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------

Query:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG
          R A VEIASKK KKWEEM +AEK  ELY+GEKGLLFW+NKFAYASIFIMIG WI+FRFVGPSLNLYQLDT PLSPTSIFKG
Subjt:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KME2 Uncharacterized protein

1.0e-53

67.22

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Query:  SLHPFLISKPPLSTIN-----PCNQI-FFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE---------R
        SLH  L SKPPLSTIN     P +QI  FF +LR ++P  IKPI+A GTD    G+  P QVPPE+TPPE VEVRFRKRSRRRSK+E E+         R
Subjt:  SLHPFLISKPPLSTIN-----PCNQI-FFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE---------R

Query:  AARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG
         A  E+ S K KKWEEMS+AEK ME+Y+GEKGLLFW+NKFAYASIFIMIG WI+FRFVGPSLNLYQLDT PLSPTS+FKG
Subjt:  AARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

A0A1S3B215 uncharacterized protein LOC103485119

1.8e-53

67.22

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Query:  SLHPFLISKPPLSTINP------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE---------R
        SLH  L SKPPLSTINP           FF SLR+++P  IKPI+A  TD    G+  P QVPPE+TPPE VEVRFRKRSRRRSK E E+         R
Subjt:  SLHPFLISKPPLSTINP------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE---------R

Query:  AARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG
         A VE++S KAKKWEEMS+ EK MELY+GEKGLLFW+NKFAYASIFIMIG WI+FRFVGPSLNLYQLDT PLSPTS+FKG
Subjt:  AARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

A0A5A7SKL6 Putative transmembrane protein

1.8e-53

67.22

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Query:  SLHPFLISKPPLSTINP------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE---------R
        SLH  L SKPPLSTINP           FF SLR+++P  IKPI+A  TD    G+  P QVPPE+TPPE VEVRFRKRSRRRSK E E+         R
Subjt:  SLHPFLISKPPLSTINP------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE---------R

Query:  AARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG
         A VE++S KAKKWEEMS+ EK MELY+GEKGLLFW+NKFAYASIFIMIG WI+FRFVGPSLNLYQLDT PLSPTS+FKG
Subjt:  AARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

A0A6J1GFF1 uncharacterized protein LOC111453672

1.2e-54

68.85

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Query:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------
        ATSLH FL SKPPL TI+P        NQ+FF  SLR +QP  IKPI+A  TD    G+  P QVPP +TPPE V+VRFRKRSRRRSK+ESE+       
Subjt:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------

Query:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG
          R A VEIASKK KKWEEM +AEK  ELY+GEKGLLFW+NKFAYASIFIMIG WI+FRFVGPSLNLYQLDT PLSPTSIFKG
Subjt:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

A0A6J1IVM3 uncharacterized protein LOC111478809

1.4e-53

67.76

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Query:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------
        +TSLH FL S+PPL TI P        NQ+FF  SLR +QP  IKPI+A  TD    G+  P QVPP +TPPE V+VRFRKRSRRRSK+ESE+       
Subjt:  ATSLHPFLISKPPLSTINP-------CNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEE-------

Query:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG
          R A VEIASKK KKWEEM +AEK  ELY+GEKGLLFW+NKFAYASIFIMIG WI+FRFVGPSLNLYQLDT PLSPTSIFKG
Subjt:  --RAARVEIASKKAKKWEEMSMAEKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G17972.1 unknown protein

9.7e-28

45.22

Show/hide

Query:  PLSTINPCNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEERAARVEIASKKA--KKWEEMSMAEKV
        P STI    Q  + ++  +      + +S N  + GG  E+          P + VE+RF++ SRR+ +EE            K+   K WEEM++ EK 
Subjt:  PLSTINPCNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEERAARVEIASKKA--KKWEEMSMAEKV

Query:  MELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG
        +ELYVGEKGLLFW+NK AYASI+I+IG WI FRFVGP+ NLYQLDT PL P +I KG
Subjt:  MELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGCAGCCACCAGTCTCCACCCATTTCTCATTTCTAAACCACCGCTCTCAACCATAAATCCCTGCAATCAGATCTTCTTCTTCCGCTCGCTTCGCCGTCGCCAGCC
TCCCGGAATCAAACCGATCAGCGCGAACGGCACCGACGGCGGCGGCGGTGGCGAGAGGACGCCGGTGCAGGTTCCGCCGGAAGTAACGCCACCGGAGAAGGTGGAGGTCC
GGTTTCGGAAGAGATCGAGAAGGCGATCGAAAGAGGAGAGCGAGGAAAGGGCGGCGAGGGTGGAGATTGCTTCGAAAAAGGCGAAGAAATGGGAGGAGATGAGCATGGCG
GAGAAGGTGATGGAGCTGTATGTGGGAGAGAAGGGATTGTTGTTTTGGGTTAACAAATTCGCTTATGCTTCCATTTTTATCATGATTGGAGCTTGGATTCTGTTTCGGTT
TGTTGGGCCTTCGCTTAATCTTTACCAGTTGGATACTCAGCCTTTGTCTCCGACTTCCATTTTCAAGGGCTAG

mRNA sequence

Show/hide mRNA sequence

GTCAGCCATAGAAAGAAAAAACAACAGATAAAGCAACTCCACAAGCAGAAGTTCTTACTAAGAAGCCATGGAAGCAGCCACCAGTCTCCACCCATTTCTCATTTCTAAAC
CACCGCTCTCAACCATAAATCCCTGCAATCAGATCTTCTTCTTCCGCTCGCTTCGCCGTCGCCAGCCTCCCGGAATCAAACCGATCAGCGCGAACGGCACCGACGGCGGC
GGCGGTGGCGAGAGGACGCCGGTGCAGGTTCCGCCGGAAGTAACGCCACCGGAGAAGGTGGAGGTCCGGTTTCGGAAGAGATCGAGAAGGCGATCGAAAGAGGAGAGCGA
GGAAAGGGCGGCGAGGGTGGAGATTGCTTCGAAAAAGGCGAAGAAATGGGAGGAGATGAGCATGGCGGAGAAGGTGATGGAGCTGTATGTGGGAGAGAAGGGATTGTTGT
TTTGGGTTAACAAATTCGCTTATGCTTCCATTTTTATCATGATTGGAGCTTGGATTCTGTTTCGGTTTGTTGGGCCTTCGCTTAATCTTTACCAGTTGGATACTCAGCCT
TTGTCTCCGACTTCCATTTTCAAGGGCTAGGGTTTGTTGGAATTACTACGTCTTTTCAATTTCTTCTACTGCGTCGTTGTAAACTCTTGTTCTGGAGTTTTTTTTTTTTT
TTTCATTTGATGATTGTATTGATAAATTTTGGAGATTATGAATTGAGTTTGTTAGATGCAAAATGAAATAGAACAA

Protein sequence

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MEAATSLHPFLISKPPLSTINPCNQIFFFRSLRRRQPPGIKPISANGTDGGGGGERTPVQVPPEVTPPEKVEVRFRKRSRRRSKEESEERAARVEIASKKAKKWEEMSMA
EKVMELYVGEKGLLFWVNKFAYASIFIMIGAWILFRFVGPSLNLYQLDTQPLSPTSIFKG

Sed0026037 (gene) of Chayote v1 genome