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Sed0026049 (gene) of Chayote v1 genome

Gene IDSed0026049
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationLG12:3675810..3676261
RNA-Seq ExpressionSed0026049
SyntenySed0026049
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582034.1 hypothetical protein SDJN03_22036, partial [Cucurbita argyrosperma subsp. sororia]6.0e-2379.41Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV
        MADWGPVVVAV+LFILLSPGL+ Q+HG++KFI+FGNFETS TSIFLHSL+FFALFC+FTL++H+HIY+
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV

KAG7018460.1 hypothetical protein SDJN02_20328, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-2379.41Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV
        MADWGPVVVAV+LFILLSPGL+ Q+HG++KFI+FGNFETS TSIFLHSL+FFALFC+FTL++H+HIY+
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV

XP_022932695.1 uncharacterized protein LOC111439164 [Cucurbita moschata]8.4e-2586.76Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV
        MADWGPV+VAVILFILLSPGLLFQ+HG+DKFIQFGNFETS TSIFLHSL+FFALFC+FTL++H+HIYV
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV

XP_022972134.1 uncharacterized protein LOC111470766 [Cucurbita maxima]8.4e-2586.76Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV
        MADWGPV+VAVILFILLSPGLLFQ+HG+DKFIQFGNFETS TSIFLHSL+FFALFC+FTL++H+HIYV
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV

XP_038907108.1 uncharacterized protein LOC120092931 [Benincasa hispida]7.1e-2482.35Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV
        MADWGPV VAVILFILLSPGLLFQ+HG++KFI+FGNFETS TSIFLHSL+FFALFC+FTL++H+HIY+
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV

TrEMBL top hitse value%identityAlignment
A0A6J1CVS1 uncharacterized protein LOC1110146874.8e-1867.65Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV
        MADWGPV VAV+LF+LLSPGLLFQ+ G  +F++FGNF TS  SIF+HSL+FFAL C+FT +V +HIY+
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV

A0A6J1EXQ9 uncharacterized protein LOC1114391636.3e-1869.12Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV
        MADWGPV VAV+LF+LLSPGLLFQ+ G   FIQFGNF+TS  SIF+HSL+FFAL C+FT ++ +HIY+
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV

A0A6J1F2V4 uncharacterized protein LOC1114391644.0e-2586.76Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV
        MADWGPV+VAVILFILLSPGLLFQ+HG+DKFIQFGNFETS TSIFLHSL+FFALFC+FTL++H+HIYV
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV

A0A6J1I7P7 uncharacterized protein LOC1114707676.3e-1869.12Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV
        MADWGPV VAV+LF+LLSPGLLFQ+ G   FIQFGNF+TS  SIF+HSL+FFAL C+FT ++ +HIY+
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV

A0A6J1IAL9 uncharacterized protein LOC1114707664.0e-2586.76Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV
        MADWGPV+VAVILFILLSPGLLFQ+HG+DKFIQFGNFETS TSIFLHSL+FFALFC+FTL++H+HIYV
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01950.1 Protein of unknown function (DUF 3339)1.1e-1455.38Show/hide
Query:  DWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIY
        DWGPV+++VI FI+LSPG+LFQ+ G  K ++FG F+TS  SI +H+L+FFA   I  + +HIHIY
Subjt:  DWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIY

AT3G27030.1 unknown protein2.4e-1453.03Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHI
        M DWGPV VAV LF+LL+PGLL Q+ G  + ++FG F+TS  S+ +H+L++F L CI  L + IHI
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHI

AT3G48660.1 Protein of unknown function (DUF 3339)2.4e-1759.7Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIY
        MADWGPVVVAVILF+LL+PGLLFQI    + ++FGN +TS  SI +H+++FF L  IFT+ + +HIY
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIY

AT5G08391.1 Protein of unknown function (DUF 3339)9.5e-1957.35Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV
        M+DWGPV+V VILF++L+PGLLFQ+ G  K+++FGNF+TS  S+ +HSL++F+L C+F L + IHIY+
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV

AT5G63500.1 Protein of unknown function (DUF 3339)3.1e-1756.72Show/hide
Query:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIY
        MADWGPV++AVILF++LSPGLLFQI    + ++FGN +TS  SI +H+++FF L  IFT+ +++HIY
Subjt:  MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATTGGGGGCCAGTTGTTGTGGCAGTGATTCTGTTCATTCTGCTATCACCAGGGCTTCTGTTTCAGATCCATGGCTCTGATAAGTTCATCCAATTTGGCAACTT
TGAAACAAGTCCCACTTCCATTTTCCTTCATTCTCTTGTTTTTTTTGCTCTCTTTTGCATCTTCACTCTTCTTGTTCACATTCATATCTATGTATGA
mRNA sequenceShow/hide mRNA sequence
AATTAATATAAATAAAAGGGGCATAATTGGTAGAACAAATTAATCAAGCAAAGCTCAAAGAAATGGCAGATTGGGGGCCAGTTGTTGTGGCAGTGATTCTGTTCATTCTG
CTATCACCAGGGCTTCTGTTTCAGATCCATGGCTCTGATAAGTTCATCCAATTTGGCAACTTTGAAACAAGTCCCACTTCCATTTTCCTTCATTCTCTTGTTTTTTTTGC
TCTCTTTTGCATCTTCACTCTTCTTGTTCACATTCATATCTATGTATGATCCTATAATTCATCATATCGTCTTTGATTTCGACCTATGATCGTGTGGATTTGCTTTTCGT
TTTGCTCGATTCGTCCTTGTATTCATGTGGATCTTGTAGTCGTTCTTAGAATTTTGTGGTTTGTTTTGTTGATGTAAGACTATGTTCACATTCTTATATAGTAATATGAT
TTTTTTTTATGA
Protein sequenceShow/hide protein sequence
MADWGPVVVAVILFILLSPGLLFQIHGSDKFIQFGNFETSPTSIFLHSLVFFALFCIFTLLVHIHIYV