; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026060 (gene) of Chayote v1 genome

Gene IDSed0026060
OrganismSechium edule (Chayote v1)
DescriptionRAB GTPase homolog A4D
Genome locationLG14:2018700..2024080
RNA-Seq ExpressionSed0026060
SyntenySed0026060
Gene Ontology termsGO:0080092 - regulation of pollen tube growth (biological process)
GO:0045177 - apical part of cell (cellular component)
GO:0070382 - exocytic vesicle (cellular component)
GO:0090404 - pollen tube tip (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0019900 - kinase binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150166.1 ras-related protein RABA4d [Cucumis sativus]1.3e-11495.07Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFS++EFS+DSKATIGVEFQTKTLVID+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMARWLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIG NP  F
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GT+IVVPGQDQDSGRKGCCF S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

XP_008460801.1 PREDICTED: ras-related protein RABA4d [Cucumis melo]1.7e-11495.07Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFS++EFS+DSKATIGVEFQTKTLVID+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMARWLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIG NP  F
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GTNIVVPGQDQDSG KGCCF S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

XP_022151622.1 ras-related protein RABA4d-like [Momordica charantia]8.3e-11495.07Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFS++EFSLDSKATIGVEFQTKTLVID+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMARWLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKK+LAAGEEIDIG  P HF
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GTNIVVPGQD DSGRKGCCF S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

XP_022925137.1 ras-related protein RABA4d [Cucurbita moschata]7.0e-11393.72Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFS++EFS+DSKATIGVEFQTKTLVID+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMARWLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRIISKKSLAAGE IDIGVNP  F
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GTNIVVPGQDQ  GRKGCCF S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

XP_038881448.1 ras-related protein RABA4d [Benincasa hispida]5.8e-11595.52Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFS++EFS+DSKATIGVEFQTKTLVID+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMARWLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIG NP  F
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GTNIVVPGQDQDSGRKGCCF S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

TrEMBL top hitse value%identityAlignment
A0A0A0KW90 Uncharacterized protein6.2e-11595.07Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFS++EFS+DSKATIGVEFQTKTLVID+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMARWLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIG NP  F
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GT+IVVPGQDQDSGRKGCCF S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

A0A1S3CDP9 ras-related protein RABA4d8.1e-11595.07Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFS++EFS+DSKATIGVEFQTKTLVID+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMARWLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIG NP  F
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GTNIVVPGQDQDSG KGCCF S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

A0A5A7UD85 Ras-related protein RABA4d8.1e-11595.07Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFS++EFS+DSKATIGVEFQTKTLVID+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMARWLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIG NP  F
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GTNIVVPGQDQDSG KGCCF S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

A0A6J1DE05 ras-related protein RABA4d-like4.0e-11495.07Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFS++EFSLDSKATIGVEFQTKTLVID+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMARWLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKK+LAAGEEIDIG  P HF
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GTNIVVPGQD DSGRKGCCF S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

A0A6J1EAZ2 ras-related protein RABA4d3.4e-11393.72Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RFS++EFS+DSKATIGVEFQTKTLVID+KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMARWLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFF ILTEIYRIISKKSLAAGE IDIGVNP  F
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GTNIVVPGQDQ  GRKGCCF S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

SwissProt top hitse value%identityAlignment
P25766 Ras-related protein RGP17.6e-9479Show/hide
Query:  YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD
        YG+  QKIDYVFKVVLIGDSAVGK+QLLARF+++EF+LDSKATIGVEFQT+TL ID +TVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFD
Subjt:  YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD

Query:  HMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHFIGTN
        H+ARWLEELRGH DKNIVIMLIGNK DLG+LR VPTEDA+EFAERENLFFMETSALESTNVE AF T+LTEIYRI+SKK+L A EE+D   N +   GT 
Subjt:  HMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHFIGTN

Query:  IVVPGQDQDSGRKGCCFRS
        IVVPGQ+     K  C  S
Subjt:  IVVPGQDQDSGRKGCCFRS

Q40191 Ras-related protein Rab11A2.6e-8674.31Show/hide
Query:  YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD
        YGD N KIDYVFKVVLIGDSAVGK+Q+LARF+++EFSLDSK+TIGVEFQT+TLVID KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FD
Subjt:  YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD

Query:  HMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHFIGTN
        H+ RWLEELR H DKNIVI+LIGNKCDL + R VPTEDA+EFAE+E LFF+ETSALE+TNVE+AF T+LTEIY I++KKSLAA E    G N     G  
Subjt:  HMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHFIGTN

Query:  IVVPGQDQD--SGRKGCC
        I++PG  Q+  + R  CC
Subjt:  IVVPGQDQD--SGRKGCC

Q40520 Ras-related protein Rab11C1.1e-8471.49Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        M++ YGD +QKIDYVFKVVLIGDSAVGKTQ+LARF+++EFSLDSKATIGVEFQT+TLVI  K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        Q+FDH+ RWLEELR H D+NIVIML GNK DL   RAVPTEDA+EFA++E LFF+ETSA+E+T +E AF T+LTEI+ I++KK+LAA +E     NP   
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQ-DSGRKGCC
         G  I+VPG  Q   G+K CC
Subjt:  IGTNIVVPGQDQ-DSGRKGCC

Q9FE79 Ras-related protein RABA4c5.8e-9477.27Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFS++EFS++SKATIGVEFQT+TL ID+KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDH+ARWLEELRGH DKNIVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+SKK+L A EE + G + +  
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCC
         GT IVV G++ +S  KGCC
Subjt:  IGTNIVVPGQDQDSGRKGCC

Q9LH50 Ras-related protein RABA4d1.5e-10283.86Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+++EFS+DSKATIGVEFQTKTLVID KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMA+WLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TILTEIYRIISKKSL A ++ D   N +  
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GT I++P + +   R GCC +S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

Arabidopsis top hitse value%identityAlignment
AT3G12160.1 RAB GTPase homolog A4D1.1e-10383.86Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARF+++EFS+DSKATIGVEFQTKTLVID KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDHMA+WLEELRGH DKNIVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF TILTEIYRIISKKSL A ++ D   N +  
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCCFRS
         GT I++P + +   R GCC +S
Subjt:  IGTNIVVPGQDQDSGRKGCCFRS

AT4G39990.1 RAB GTPase homolog A4B3.4e-8167.42Show/hide
Query:  YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD
        YG  + K+DYVFKVVLIGDSAVGK+QLLARF++DEFS+DSKATIGVEFQT+TL I++K++KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+
Subjt:  YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD

Query:  HMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHFIGTN
        H+ RWLEELR H DKNIVI+LIGNK DL   RAVPTEDA+EFAE+E LFF+ETSAL +TNVE +F T++T+IY  ++KK+LA+  + +   NP    G  
Subjt:  HMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHFIGTN

Query:  IVVPGQDQDSGRK--GCCFRS
        I++PG  Q+   K   CC  S
Subjt:  IVVPGQDQDSGRK--GCCFRS

AT5G47960.1 RAB GTPase homolog A4C4.1e-9577.27Show/hide
Query:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR
        MS    ++NQKIDYVFKVVLIGDSAVGK+QLLARFS++EFS++SKATIGVEFQT+TL ID+KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKR
Subjt:  MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR

Query:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF
        QSFDH+ARWLEELRGH DKNIVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F T+LTEIYRI+SKK+L A EE + G + +  
Subjt:  QSFDHMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHF

Query:  IGTNIVVPGQDQDSGRKGCC
         GT IVV G++ +S  KGCC
Subjt:  IGTNIVVPGQDQDSGRKGCC

AT5G59150.1 RAB GTPase homolog A2D2.1e-7061.19Show/hide
Query:  QKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARW
        Q  DY+FK+VLIGDS VGKT +L+RF+++EF L+SK+TIGVEF T+TL ++ KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RW
Subjt:  QKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARW

Query:  LEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHFIGTNIVVPG
        L ELR H D NIVIM+ GNK DL  LR+V  ED Q  AE E L F+ETSALE+TNVE AF T+L EIY IISKK+LAA E              N  +PG
Subjt:  LEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHFIGTNIVVPG

Query:  Q--------DQDSGRKGCC
        Q           +G++GCC
Subjt:  Q--------DQDSGRKGCC

AT5G65270.1 RAB GTPase homolog A4A8.6e-8572.6Show/hide
Query:  YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD
        YGD +QKIDYVFKVVLIGDSAVGK+Q+LAR+++DEFSLDSKATIGVEFQT+TLVID K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FD
Subjt:  YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFD

Query:  HMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHFIGTN
        H+ RWLEELR H DKNIVI+LIGNK DL   RA+PTEDA+EFAE+E LFF+ETSA  +TNVE+AF T+LTEI+ I++KKSLAA E+ + G NP    G  
Subjt:  HMARWLEELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHFIGTN

Query:  I-VVPGQDQDSGRKG--CC
        I +VPG  Q    K   CC
Subjt:  I-VVPGQDQDSGRKG--CC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATCTGTATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATTGGCGATTCTGCCGTTGGCAAGACCCAACTCCTTGCTCGATTTTCGAA
GGATGAGTTTAGCCTCGATTCGAAAGCTACTATCGGCGTCGAGTTTCAGACTAAGACTCTTGTCATTGATAAAAAAACTGTCAAAGCCCAGATATGGGATACTGCTGGAC
AAGAAAGGTACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTGGGAGCAATGCTAGTTTACGACATGACGAAGCGCCAGTCGTTCGACCACATGGCAAGGTGGCTG
GAGGAGCTAAGAGGACATGTTGATAAGAACATAGTGATAATGCTGATCGGAAACAAATGCGACCTAGGAAGCCTCCGAGCAGTGCCAACAGAAGATGCACAAGAATTCGC
CGAACGAGAAAACCTGTTCTTCATGGAGACATCAGCTCTCGAGTCCACAAACGTGGAAACGGCATTCTTCACAATTCTAACAGAGATATATAGGATAATCAGCAAGAAAA
GTCTAGCAGCTGGGGAAGAAATAGATATTGGTGTGAATCCAACTCATTTTATAGGGACTAACATTGTTGTTCCTGGACAGGACCAGGATTCTGGGAGAAAAGGGTGTTGC
TTTCGCTCATGA
mRNA sequenceShow/hide mRNA sequence
GGATACCCCACAATGGCCGTTGCTCCATTTCAATCCCTTTTCCTCCTCTTTCATTCACCATCTTCCATTCCCATTTCCCAAATCCCCACAATATTCTCTGAAACGATTCC
CTTCAAACCCAGCTCTGTTTTCGGTTCAATTTCTTGAGGGGATGATTGATTGATTCTCTTCACCTCCGCGTTTGATTCCAGGGGTTTCCCACTTTTTGTGATCCGGAAAT
GGGAAATTTCTTTCAGTTTTGATGCTCTTATCTGTTTAATCTGCGCGTTTTGGAGCTGGGTTTTGTGGGGAGGGGATTTTGAAGGGAGAATGTCGAATCTGTATGGGGAT
TATAATCAGAAGATTGATTATGTTTTCAAAGTTGTGTTGATTGGCGATTCTGCCGTTGGCAAGACCCAACTCCTTGCTCGATTTTCGAAGGATGAGTTTAGCCTCGATTC
GAAAGCTACTATCGGCGTCGAGTTTCAGACTAAGACTCTTGTCATTGATAAAAAAACTGTCAAAGCCCAGATATGGGATACTGCTGGACAAGAAAGGTACCGAGCAGTGA
CAAGTGCATACTACAGAGGTGCAGTGGGAGCAATGCTAGTTTACGACATGACGAAGCGCCAGTCGTTCGACCACATGGCAAGGTGGCTGGAGGAGCTAAGAGGACATGTT
GATAAGAACATAGTGATAATGCTGATCGGAAACAAATGCGACCTAGGAAGCCTCCGAGCAGTGCCAACAGAAGATGCACAAGAATTCGCCGAACGAGAAAACCTGTTCTT
CATGGAGACATCAGCTCTCGAGTCCACAAACGTGGAAACGGCATTCTTCACAATTCTAACAGAGATATATAGGATAATCAGCAAGAAAAGTCTAGCAGCTGGGGAAGAAA
TAGATATTGGTGTGAATCCAACTCATTTTATAGGGACTAACATTGTTGTTCCTGGACAGGACCAGGATTCTGGGAGAAAAGGGTGTTGCTTTCGCTCATGAATTTCACAT
AATTACATGATCATTTCAGTTGGGACATTGTTTTTCTATTCCACTTGTTTGGATTTATACTAAGAAAAAAAAAAGAATCATGTATTTGTAATTTGTAAAGGGACTGGCTT
GATAACAT
Protein sequenceShow/hide protein sequence
MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSKDEFSLDSKATIGVEFQTKTLVIDKKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWL
EELRGHVDKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGVNPTHFIGTNIVVPGQDQDSGRKGCC
FRS