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Sed0026101 (gene) of Chayote v1 genome

Gene IDSed0026101
OrganismSechium edule (Chayote v1)
DescriptionPSI-G
Genome locationLG03:8671410..8672307
RNA-Seq ExpressionSed0026101
SyntenySed0026101
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000549 - Photosystem I PsaG/PsaK protein
IPR016370 - Photosystem I PsaG/PsaK, plant
IPR017494 - Photosystem I PsaG, plant
IPR023618 - Photosystem I PsaG/PsaK domain, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596752.1 Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.6e-6181.7Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE
        +SAVFA+S+FST VGRQ  +PS IS+QGLR LP  KS RS++ V +++  + VKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVP QNG++HFE
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE

Query:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        AGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

KAG7028289.1 Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-6081.58Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE
        +SAVFA+S+FST VGRQ  +PS IS+QGLR LP  KS RS++ V +++  + VKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVP QNG++HFE
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE

Query:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKF
        AGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKF
Subjt:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKF

XP_004149569.1 photosystem I reaction center subunit V, chloroplastic [Cucumis sativus]1.4e-5980.39Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE
        +SAVFA+  FS    RQ  +P+ ISFQGLRALP+ KS RS+ V T  +  M+VKAELNPS+VISLSTGLSLFLGRFVFFNFQRENV KQVP QNGL+HFE
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE

Query:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        AGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_008449063.1 PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo]2.8e-6081.7Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE
        +SAVF +  FS    RQ  SP+ ISFQGLRALP+ KS RSI    TR+  M+VKAELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVP QNGL+HFE
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE

Query:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        AGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_022934047.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata]1.4e-5981.05Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE
        +SAVFA+S+FS  VGRQ  +PS IS+QGLR LP  KS RS++ V + +  + VKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVP QNG++HFE
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE

Query:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        AGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W3 PSI-G6.7e-6080.39Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE
        +SAVFA+  FS    RQ  +P+ ISFQGLRALP+ KS RS+ V T  +  M+VKAELNPS+VISLSTGLSLFLGRFVFFNFQRENV KQVP QNGL+HFE
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE

Query:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        AGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A1S3BKK6 PSI-G1.4e-6081.7Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE
        +SAVF +  FS    RQ  SP+ ISFQGLRALP+ KS RSI    TR+  M+VKAELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVP QNGL+HFE
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE

Query:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        AGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A5D3CPR0 PSI-G1.4e-6081.7Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE
        +SAVF +  FS    RQ  SP+ ISFQGLRALP+ KS RSI    TR+  M+VKAELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVP QNGL+HFE
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE

Query:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        AGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1F1K2 PSI-G6.7e-6081.05Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE
        +SAVFA+S+FS  VGRQ  +PS IS+QGLR LP  KS RS++ V + +  + VKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVP QNG++HFE
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE

Query:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        AGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1L2L3 PSI-G1.1e-5980.39Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE
        +SAVFA+S+FS  V RQ  +PS IS+QGLR LP  KS RS++ V + +  + VKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVP QNG++HFE
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFE

Query:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        AGDVRAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  AGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

SwissProt top hitse value%identityAlignment
P12357 Photosystem I reaction center subunit V, chloroplastic3.9e-4964.24Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSN--------ISFQGLRAL----PATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSK
        A+A  +S+  +    +QPQ             SF GLR L     +  S  S+S+ + R+  M+ +AEL+PS+VISLSTGLSLFLGRFVFFNFQREN++K
Subjt:  ASAVFASSAFSTVVGRQPQSPSN--------ISFQGLRAL----PATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSK

Query:  QVPAQNGLSHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        QVP QNG+SHFEAGD RAKEY+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  QVPAQNGLSHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

P14224 Photosystem I reaction center subunit V, chloroplastic1.0e-1237.9Show/hide
Query:  QGLRALPATKSPRSISVVTTRKPGMSV--KAELNPSVVISLSTGLSLFLGRFVFFNFQRENV---SKQVPAQNGLSHFEAGDVRAKEYISLLKSNDPVGF
        Q L + P+ ++  S  V   R P ++V  KA L+P +VIS ST   L +GRFVF  +QR      S   P   G ++F+  D++     ++  +NDP GF
Subjt:  QGLRALPATKSPRSISVVTTRKPGMSV--KAELNPSVVISLSTGLSLFLGRFVFFNFQRENV---SKQVPAQNGLSHFEAGDVRAKEYISLLKSNDPVGF

Query:  NIVDVLAWGSIGHIVAYYILATSS
        NI+DV  WG++GH V + +LA +S
Subjt:  NIVDVLAWGSIGHIVAYYILATSS

Q00327 Photosystem I reaction center subunit V, chloroplastic5.0e-4470.08Show/hide
Query:  GLRALPATKSPRSI-SVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFEAGDVRAKEYISLLKSNDPVGFNIVDV
        GLR  P+ ++  S   V    +  ++ +A L PSVVISLSTGLSL +GRFVFFNFQRENV+KQVP QNG +HFEAGD RAKE+  +LKSNDPVGFN+VDV
Subjt:  GLRALPATKSPRSI-SVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFEAGDVRAKEYISLLKSNDPVGFNIVDV

Query:  LAWGSIGHIVAYYILATSSNGYDPKFF
        LAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  LAWGSIGHIVAYYILATSSNGYDPKFF

Q9S7N7 Photosystem I reaction center subunit V, chloroplastic1.0e-4966.88Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTT---RKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPAQNGL
        ASA+ + + FST +    ++P++ISF GLR L    S  ++  ++T   +     V+AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +P QNG 
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTT---RKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPAQNGL

Query:  SHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +HFEAGD RAKEY+SLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  SHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9SPM4 Photosystem I reaction center subunit V, chloroplastic9.5e-1950.54Show/hide
Query:  NPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPAQNGLSHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD
        N S +IS ST   L LGRFVF  FQR  VS+  +P QNG+          + + S+LK+NDP GF +VDVLAWG++GH V ++ILAT++NGY+
Subjt:  NPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPAQNGLSHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD

Arabidopsis top hitse value%identityAlignment
AT1G30380.1 photosystem I subunit K8.8e-0427.78Show/hide
Query:  STVVGRQPQSPSNISFQGLRALPATKSPRS--ISVVTTRKPG---MSVKAEL---NPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFEAG
        ST++   PQ      F GLRA   + +P     SV   R+ G   +  K +    + ++++  ST L LF GRF              P+ N  +     
Subjt:  STVVGRQPQSPSNISFQGLRALPATKSPRS--ISVVTTRKPG---MSVKAEL---NPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFEAG

Query:  DVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSN
         +R +   S L++ DP GF + D LA G++GHI+   ++    N
Subjt:  DVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSN

AT1G55670.1 photosystem I subunit G7.4e-5166.88Show/hide
Query:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTT---RKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPAQNGL
        ASA+ + + FST +    ++P++ISF GLR L    S  ++  ++T   +     V+AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +P QNG 
Subjt:  ASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTT---RKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPAQNGL

Query:  SHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +HFEAGD RAKEY+SLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  SHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTGCAGTCTTTGCCTCCTCCGCCTTCTCCACCGTCGTCGGGAGGCAGCCGCAGAGCCCCTCAAACATATCATTCCAGGGCCTCCGTGCCCTCCCGGCGACCAA
GTCACCACGCAGCATTAGCGTGGTGACGACCCGAAAGCCAGGCATGTCGGTGAAGGCGGAGCTGAACCCATCCGTGGTGATAAGCCTGAGCACAGGGCTATCCTTGTTCC
TAGGGAGGTTTGTTTTCTTCAACTTCCAAAGGGAGAATGTGAGCAAGCAAGTGCCGGCGCAGAACGGGTTGAGCCACTTCGAAGCGGGCGACGTGAGAGCTAAGGAGTAC
ATAAGCTTGTTGAAGTCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCATGGGGCTCCATTGGCCATATTGTTGCTTACTACATCTTGGCCACTTCTAGCAA
TGGCTATGATCCCAAGTTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCATCCTCACAATCTATATCTCTCTTCTCAACCATCTCTATTATTATCCAAATATATGATCATAAACCATCCAGCTCTCTCAACTATCCACTCCAAAATCTCAA
CACAACACACCATCATCAATGGCCTCTGCAGTCTTTGCCTCCTCCGCCTTCTCCACCGTCGTCGGGAGGCAGCCGCAGAGCCCCTCAAACATATCATTCCAGGGCCTCCG
TGCCCTCCCGGCGACCAAGTCACCACGCAGCATTAGCGTGGTGACGACCCGAAAGCCAGGCATGTCGGTGAAGGCGGAGCTGAACCCATCCGTGGTGATAAGCCTGAGCA
CAGGGCTATCCTTGTTCCTAGGGAGGTTTGTTTTCTTCAACTTCCAAAGGGAGAATGTGAGCAAGCAAGTGCCGGCGCAGAACGGGTTGAGCCACTTCGAAGCGGGCGAC
GTGAGAGCTAAGGAGTACATAAGCTTGTTGAAGTCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCATGGGGCTCCATTGGCCATATTGTTGCTTACTACAT
CTTGGCCACTTCTAGCAATGGCTATGATCCCAAGTTCTTTTAGTGCCTTCTTGTTTGTATAGGGAATGGTTCAATCTATCTCTGCTTTAAAACTTTTCATCTCTAATGGG
CTTGGGGCAAGTAAACATGGGGTTTGATTCAGTTGTTTGAGTCTGATTATTATTGCAATATGTTTTCTTTTGTATATTGTTCTCTTAGTAGATAGATACCAAATCTCATT
TTTGCTTTTCTTAATCATCTGGTTTGTGAACACAAATGTCTATATATTAGTCTAGGGGATTATGAAAGAATATTTATGAAGAAAGAAATTGCAAAAATCTATCTTTTTGT
TGCTAGAACTAAATACTG
Protein sequenceShow/hide protein sequence
MASAVFASSAFSTVVGRQPQSPSNISFQGLRALPATKSPRSISVVTTRKPGMSVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPAQNGLSHFEAGDVRAKEY
ISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF