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Sed0026115 (gene) of Chayote v1 genome

Gene IDSed0026115
OrganismSechium edule (Chayote v1)
DescriptionOxidative stress 3
Genome locationLG12:29146461..29147773
RNA-Seq ExpressionSed0026115
SyntenySed0026115
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588007.1 hypothetical protein SDJN03_16572, partial [Cucurbita argyrosperma subsp. sororia]1.7e-6378.95Show/hide
Query:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI-------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESF
        MG+LQE Q L+VD  Q+GCCR IMEDCEASME+SME SS NSEASSSL+MVEDA+S +       SSSSNGPL+ELSEL+ HLP+KRGLSKYYDG+SESF
Subjt:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI-------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESF

Query:  TSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH
        TSLASVE+LEDLAKRVSPIRKKFKSC S  GGFDGHKSIIP+ATIAKKASRSRGK  LLCGSRSA+SVN H
Subjt:  TSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH

XP_022931767.1 uncharacterized protein LOC111438035 [Cucurbita moschata]2.9e-6378.36Show/hide
Query:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI-------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESF
        MG+LQE Q L+VD  Q+GCCR IMEDCEASME+SME SS NSEASSS++MVEDA+S +       SSSSNGPL+ELSEL+ HLP+KRGLSKYYDG+SESF
Subjt:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI-------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESF

Query:  TSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH
        TSLASVE+LEDLAKRVSPIRKKFKSC S  GGFDGHKSIIP+ATIAKKASRSRGK  LLCGSRSA+SVN H
Subjt:  TSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH

XP_022960918.1 uncharacterized protein LOC111461578 [Cucurbita moschata]1.1e-6279.21Show/hide
Query:  MGKLQENQTLHVDGTQ-NGCCRAIMEDCEASMETSMELSSVNSEA--------SSSLDMVEDAISPISS------SSNGPLYELSELIAHLPIKRGLSKY
        MGKLQENQ L VDG Q NGCCR I EDCEASME+SMELSSVNSEA        SSSLDMVEDAISP+SS      SSNGPLYELSEL+ HLP+KRGLS+Y
Subjt:  MGKLQENQTLHVDGTQ-NGCCRAIMEDCEASMETSMELSSVNSEA--------SSSLDMVEDAISPISS------SSNGPLYELSELIAHLPIKRGLSKY

Query:  YDGRSESFTSLASVEKLEDLAKRVSPIRKKFKSCKSFGGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH
        YDG+SESFTSLASVE+LEDLAKRVSPI KKFKSCKS   FDGHKSIIP+ATIAKKASRSRG++ LLCGSRSAI VNGH
Subjt:  YDGRSESFTSLASVEKLEDLAKRVSPIRKKFKSCKSFGGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH

XP_023005492.1 uncharacterized protein LOC111498459 [Cucurbita maxima]3.7e-6377.19Show/hide
Query:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI-------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESF
        MG+LQE Q L+VD  Q+GCCR IMEDCEASME+SME SS NSEASSSL+MVEDA+S +       SSSSNGPL+ELSEL+ HLP+KRGLSKYYDG+SESF
Subjt:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI-------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESF

Query:  TSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH
        TSLASVE+LEDLAKRV PIRKKFKSCKS  GGFDGHKSI+P+AT+AKKASRSRGKS L+CGSRS +SVN H
Subjt:  TSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH

XP_023530218.1 uncharacterized protein LOC111792849 [Cucurbita pepo subsp. pepo]1.5e-6478.61Show/hide
Query:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI---------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSE
        MG+LQE Q LHVD  QNGCCR IMEDCEASME+SME SS NSEASSSL+MVEDA+S +         SSSSNGPL+ELSEL+ HLP+KRGLSKYYDG+SE
Subjt:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI---------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSE

Query:  SFTSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH
        SFTSLASVE+LEDLAKRVSPIRKKFKSC S  GGFDGHKSI+P+ TIAKKASRSRGKS LLCGSRSA+SVN H
Subjt:  SFTSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH

TrEMBL top hitse value%identityAlignment
A0A6J1CTH8 uncharacterized protein LOC1110146012.8e-5677.91Show/hide
Query:  MGKLQENQTLHVDGTQNGCCRAIM-EDCEASMETSMELSSVNSEASSSLDMV-EDAISPI------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSES
        MGKLQENQ     G+QNGCCRAIM ED EASME+SME SS  S+ASSSLDMV ED +SP       SSSSNGP YELSEL+AHLP+KRGLSKYYDG+SES
Subjt:  MGKLQENQTLHVDGTQNGCCRAIM-EDCEASMETSMELSSVNSEASSSLDMV-EDAISPI------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSES

Query:  FTSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH
        FTSLASV +LEDLAKRVSPIRKK KSCKSF GGFD HKSIIP+ATIAKKASRSR K+ LL GSRSAISVNG+
Subjt:  FTSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH

A0A6J1EUM1 uncharacterized protein LOC1114380351.4e-6378.36Show/hide
Query:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI-------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESF
        MG+LQE Q L+VD  Q+GCCR IMEDCEASME+SME SS NSEASSS++MVEDA+S +       SSSSNGPL+ELSEL+ HLP+KRGLSKYYDG+SESF
Subjt:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI-------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESF

Query:  TSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH
        TSLASVE+LEDLAKRVSPIRKKFKSC S  GGFDGHKSIIP+ATIAKKASRSRGK  LLCGSRSA+SVN H
Subjt:  TSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH

A0A6J1HAD2 uncharacterized protein LOC1114615785.3e-6379.21Show/hide
Query:  MGKLQENQTLHVDGTQ-NGCCRAIMEDCEASMETSMELSSVNSEA--------SSSLDMVEDAISPISS------SSNGPLYELSELIAHLPIKRGLSKY
        MGKLQENQ L VDG Q NGCCR I EDCEASME+SMELSSVNSEA        SSSLDMVEDAISP+SS      SSNGPLYELSEL+ HLP+KRGLS+Y
Subjt:  MGKLQENQTLHVDGTQ-NGCCRAIMEDCEASMETSMELSSVNSEA--------SSSLDMVEDAISPISS------SSNGPLYELSELIAHLPIKRGLSKY

Query:  YDGRSESFTSLASVEKLEDLAKRVSPIRKKFKSCKSFGGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH
        YDG+SESFTSLASVE+LEDLAKRVSPI KKFKSCKS   FDGHKSIIP+ATIAKKASRSRG++ LLCGSRSAI VNGH
Subjt:  YDGRSESFTSLASVEKLEDLAKRVSPIRKKFKSCKSFGGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH

A0A6J1JFM4 uncharacterized protein LOC1114852972.5e-5776.22Show/hide
Query:  MGKLQENQTLHVDGTQ-NGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPISSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESFTSLASV
        MGKLQENQ L VDG Q NGCCR I EDC  + E     +S +S +SSSLDMVEDA+SP++SSSNGPLYELSEL+ HLP+KRGLS+YYDG+SESFTSLASV
Subjt:  MGKLQENQTLHVDGTQ-NGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPISSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESFTSLASV

Query:  EKLEDLAKRVSPIRKKFKSCKSFGGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH
        E+LEDLAKRVSPI KKFKSCKS   FDGHKSIIP+A IAKKASRSRG++ LLCGSRSAI VNGH
Subjt:  EKLEDLAKRVSPIRKKFKSCKSFGGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH

A0A6J1KT99 uncharacterized protein LOC1114984591.8e-6377.19Show/hide
Query:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI-------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESF
        MG+LQE Q L+VD  Q+GCCR IMEDCEASME+SME SS NSEASSSL+MVEDA+S +       SSSSNGPL+ELSEL+ HLP+KRGLSKYYDG+SESF
Subjt:  MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPI-------SSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESF

Query:  TSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH
        TSLASVE+LEDLAKRV PIRKKFKSCKS  GGFDGHKSI+P+AT+AKKASRSRGKS L+CGSRS +SVN H
Subjt:  TSLASVEKLEDLAKRVSPIRKKFKSCKSF-GGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03170.1 unknown protein2.9e-0543.64Show/hide
Query:  KRGLSKYYDGRSESFTSLASVEKLEDLAKRVSPIRKKFKS------CKSFGGFDG
        +RGLSK+Y G+S+SFT+LA    +EDLAK  +P   K K       C+   G  G
Subjt:  KRGLSKYYDGRSESFTSLASVEKLEDLAKRVSPIRKKFKS------CKSFGGFDG

AT3G43850.1 unknown protein1.4e-0435.16Show/hide
Query:  MEDCEASMETSMELSSVNSEASS-----SLDMVEDAISPISSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESFTSLASVEKL--EDLAK
        ++  + +     E + ++S  SS     + D  E   + I SS NGPL  +  L   LPIKR +SK+Y G+S+SF SL+    L  +DL K
Subjt:  MEDCEASMETSMELSSVNSEASS-----SLDMVEDAISPISSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESFTSLASVEKL--EDLAK

AT4G26288.1 FUNCTIONS IN: molecular_function unknown8.1e-1649.18Show/hide
Query:  TSMELSSVNSEASSSLDMVEDA---ISPISSSSNGPLYELSELIAHLPI----KRGLSKYYDGRSESFTSLASVEKLEDLAKRVSPIRKKFKSCKSFGGF
        +S ++SS +S +  S D+ EDA    S  SSSSNGP  +LS+LI+ LPI    K GLSKYY G+S+SFTSLA+V  L+DL KR S    + KSC     F
Subjt:  TSMELSSVNSEASSSLDMVEDA---ISPISSSSNGPLYELSELIAHLPI----KRGLSKYYDGRSESFTSLASVEKLEDLAKRVSPIRKKFKSCKSFGGF

Query:  DGHKSIIPKATIAKKASRSRGK
         G     PKATI+ KA+R+  K
Subjt:  DGHKSIIPKATIAKKASRSRGK

AT5G21940.1 unknown protein5.8e-0628.57Show/hide
Query:  ASMETSMELSSVNSEASSSLDMVEDAISPISSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESFT--------SLASVEKLEDLAKRVSPIRKKFKSCK
        +S  +S+  +S + E SS     +   + + S   GPL  +  L   LP+++G+SKYY G+S+SFT        +L S   ++DLAK  +P  ++ ++  
Subjt:  ASMETSMELSSVNSEASSSLDMVEDAISPISSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESFT--------SLASVEKLEDLAKRVSPIRKKFKSCK

Query:  SFGGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISV
            ++ +K+  P+  I+KK   S  +S L      A  V
Subjt:  SFGGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISV

AT5G56550.1 oxidative stress 36.7e-1847.9Show/hide
Query:  ETSMELSSVNSEASSSLDMVEDAISPISSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESFTSLASVEKLEDLAKRVSPIRK---KFKSCKSFGGF--D
        E +    S++S   S     +D     SSSSNGPL +LS+L++HLPIKRGLSK+Y+G+S+SFTSL +V+ LEDL KR    R    K KS +S GG    
Subjt:  ETSMELSSVNSEASSSLDMVEDAISPISSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESFTSLASVEKLEDLAKRVSPIRK---KFKSCKSFGGF--D

Query:  GHKSII-PKATIAKKASRS
         +K +  PKATI+KK +R+
Subjt:  GHKSII-PKATIAKKASRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAATTGCAAGAAAATCAGACTCTTCATGTTGATGGAACTCAGAATGGTTGTTGCAGAGCAATCATGGAAGATTGTGAAGCTTCAATGGAAACTTCCATGGAGCT
AAGTTCTGTAAATTCTGAAGCATCTTCTTCTTTGGATATGGTTGAAGATGCTATCTCTCCAATTTCATCTTCTTCAAATGGGCCACTTTATGAGCTATCAGAGCTAATAG
CTCATCTTCCAATAAAGAGAGGACTGTCTAAATATTATGATGGAAGGTCGGAATCTTTTACATCTCTAGCAAGTGTAGAAAAATTAGAAGATTTGGCAAAGAGGGTGTCT
CCAATTAGGAAAAAGTTCAAATCTTGCAAGAGTTTTGGAGGTTTTGATGGCCATAAATCCATTATTCCCAAGGCTACCATTGCTAAGAAAGCTTCAAGATCAAGAGGGAA
AAGTGGTTTGCTTTGTGGTTCTAGATCTGCAATCTCTGTGAATGGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATATTATCCAACTCTATCTCTTGTTAAAATAACAACATTAATATAAAAACAATTCTTTCCACATATAAATAGCTTCTAAAAAGCACATACTATACAGTTAGGAAGTTCTA
TTTGATCATTCTATTCTCAAAGTTTTATCCAGGAAAACTAAAAAAGTTCATTCTTTTCATCTTCTACTCTCCATATATAGTCACAATTAGCCATTTTCCCTAATACCCAT
CTTCTTCTTTTTTTTTTAGTTTATTTTCCAATGGGAAAATTGCAAGAAAATCAGACTCTTCATGTTGATGGAACTCAGAATGGTTGTTGCAGAGCAATCATGGAAGATTG
TGAAGCTTCAATGGAAACTTCCATGGAGCTAAGTTCTGTAAATTCTGAAGCATCTTCTTCTTTGGATATGGTTGAAGATGCTATCTCTCCAATTTCATCTTCTTCAAATG
GGCCACTTTATGAGCTATCAGAGCTAATAGCTCATCTTCCAATAAAGAGAGGACTGTCTAAATATTATGATGGAAGGTCGGAATCTTTTACATCTCTAGCAAGTGTAGAA
AAATTAGAAGATTTGGCAAAGAGGGTGTCTCCAATTAGGAAAAAGTTCAAATCTTGCAAGAGTTTTGGAGGTTTTGATGGCCATAAATCCATTATTCCCAAGGCTACCAT
TGCTAAGAAAGCTTCAAGATCAAGAGGGAAAAGTGGTTTGCTTTGTGGTTCTAGATCTGCAATCTCTGTGAATGGGCATTGATTATTTGCTAACCCTAGTAGAACTCATC
TTTTTCTCTCTTTTTTTTATCTTTTATTAAGAATTTTGTTACA
Protein sequenceShow/hide protein sequence
MGKLQENQTLHVDGTQNGCCRAIMEDCEASMETSMELSSVNSEASSSLDMVEDAISPISSSSNGPLYELSELIAHLPIKRGLSKYYDGRSESFTSLASVEKLEDLAKRVS
PIRKKFKSCKSFGGFDGHKSIIPKATIAKKASRSRGKSGLLCGSRSAISVNGH