; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026126 (gene) of Chayote v1 genome

Gene IDSed0026126
OrganismSechium edule (Chayote v1)
DescriptionRING-H2 finger protein
Genome locationLG11:35031140..35032572
RNA-Seq ExpressionSed0026126
SyntenySed0026126
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052006.1 RING-H2 finger protein ATL72 [Cucumis melo var. makuwa]1.2e-8786Show/hide
Query:  MVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQIP
        M S+HHR R HR LL ADTTA PSNG+RT NS+NNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGG+A+ L+A+GLKKSALRQIP
Subjt:  MVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDEIS
        VAVYGSE+GLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRC+DTWLASHSSCPTCRQSLVEQQS SE A AE  NRPA  SS  GQGEIS+TVDEI+
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDEIS

KAG6578482.1 RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. sororia]2.8e-8481.19Show/hide
Query:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ
        MAMVSDHHR   HR LL A+TT  PSNG+RT NS+ NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRF+FETGGG+A+ L+A GLKKSALR+
Subjt:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE
        +PV VYGSESGL IRETDCPICLGDFIAGEKIKVLPKCNHGFHVRC+DTWLASHSSCPTCRQSL EQQS+SE  EA+  NRPA  SS  GQGEIS+ +D+
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE

Query:  IS
        IS
Subjt:  IS

KAG7016045.1 RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-8581.68Show/hide
Query:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ
        MAMVSDHHR R HR LL A+TT  PSNG+RT NS+ NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRF+FETGGG+A+ L+A GLKKSALR+
Subjt:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE
        +PV VYGSESGL IRETDCPICLGDFIAGEKIKVLPKCNHGFHVRC+DTWLASHSSCPTCRQSL EQQS+SE  EA+  NRPA  SS  GQGEIS+ +D+
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE

Query:  IS
        IS
Subjt:  IS

XP_022938777.1 RING-H2 finger protein ATL74-like [Cucurbita moschata]2.1e-8481.19Show/hide
Query:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ
        MAMVSDHHR R HR LL A+TT  PSNG+RT NS+ NEANFDTNMVIILAALLCALICALGLNSIVRCA RCSRRF+FETGGG+A+ L+A GLKKSALR+
Subjt:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE
        +PV VYGSESGL IRETDCPICLGDFIAGEKIKVLPKCNHGFHVRC+DTWLASHSSCPTCRQSL EQQS+SE  EA+  NRPA  SS  GQGEIS+ +D+
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE

Query:  IS
        IS
Subjt:  IS

XP_023550807.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]7.3e-8581.68Show/hide
Query:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ
        MAMVSDHHR R HR LL A+TT  PSNG+RT NS+ NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRF+FETGGG+A+ L+A GLKKSALR+
Subjt:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE
        +PV VYGSESGL IRETDCPICLGDFIAGEKIKVLPKCNHGFHVRC+DTWLASHSSCPTCRQSL EQQS+SE  EA+  NRPA  SS  GQGEIS+ +D+
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE

Query:  IS
        IS
Subjt:  IS

TrEMBL top hitse value%identityAlignment
A0A0A0KAH2 RING-type domain-containing protein3.0e-8482.18Show/hide
Query:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ
        M M S+HHR R  R LL  DTTAPPSNG+RT NS+NNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGG+A+ L+A GLKKSALRQ
Subjt:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE
        IPVAVYGSE+GLEIRETDCPICLGDF+AGEKIK+LPKCNHGFHVRC+DTWLASHSSCPTCRQSL+EQQS SE A  E  NR A  SS  GQGEIS+TVD 
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE

Query:  IS
        I+
Subjt:  IS

A0A5D3BXT6 RING-H2 finger protein ATL725.8e-8886Show/hide
Query:  MVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQIP
        M S+HHR R HR LL ADTTA PSNG+RT NS+NNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGG+A+ L+A+GLKKSALRQIP
Subjt:  MVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDEIS
        VAVYGSE+GLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRC+DTWLASHSSCPTCRQSLVEQQS SE A AE  NRPA  SS  GQGEIS+TVDEI+
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDEIS

A0A6J1BZW4 RING-H2 finger protein ATL745.1e-8485.42Show/hide
Query:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ
        MAM SDHHRHR HR LL  D TAPPSNG RT +S++NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFET GG++T L+A GLKKSALRQ
Subjt:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQG
        IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNH FHVRC+DTWLASHSSCPTCRQSL+EQQS SE A AE  NRPA  SS GGQG
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQG

A0A6J1FF16 RING-H2 finger protein ATL74-like1.0e-8481.19Show/hide
Query:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ
        MAMVSDHHR R HR LL A+TT  PSNG+RT NS+ NEANFDTNMVIILAALLCALICALGLNSIVRCA RCSRRF+FETGGG+A+ L+A GLKKSALR+
Subjt:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE
        +PV VYGSESGL IRETDCPICLGDFIAGEKIKVLPKCNHGFHVRC+DTWLASHSSCPTCRQSL EQQS+SE  EA+  NRPA  SS  GQGEIS+ +D+
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE

Query:  IS
        IS
Subjt:  IS

A0A6J1JVF4 RING-H2 finger protein ATL74-like1.3e-8481.19Show/hide
Query:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ
        MAMVSDHHR R HR LL A+TT  PSNG+RT NS+ NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRF+FETGGG+A+ L+A GLKKSALR+
Subjt:  MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT-LSAAGLKKSALRQ

Query:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE
        +PV VYGSESGL IRETDCPICLGDFIAGEKIKVLPKCNHGFHVRC+DTWLASHSSCPTCRQSL EQQS+SE  EA+  NRPA   S  GQGEIS+ +D+
Subjt:  IPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDE

Query:  IS
        IS
Subjt:  IS

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL101.8e-3048.12Show/hide
Query:  NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT----LSAAGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKIK
        +E N   N++++L+ L+C +IC LGL+ I+RCALR S RF       S +     S  G+KK ALR  PV  Y  E  L   + +C ICL DF++GE+++
Subjt:  NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT----LSAAGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKIK

Query:  VLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE
        +LPKCNHGFHVRC+D WL  H +CP CR  LVE
Subjt:  VLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE

Q6NQG7 RING-H2 finger protein ATL783.8e-3647.4Show/hide
Query:  RNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGS--ATLSAAGLKKSALRQIPVAVYGSESGL
        R LL+      P   T   + +  + NFD N+V++L+ LLCAL+C+LGLNSI+RCALRCS     E GG +    L+  G+K+ AL+      Y +E  L
Subjt:  RNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGS--ATLSAAGLKKSALRQIPVAVYGSESGL

Query:  EIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE
           +T+C ICL +F+A E++K+LP C+HGFHVRC+D WL+SHSSCPTCR  L++
Subjt:  EIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE

Q9FLC6 RING-H2 finger protein ATL733.9e-4157.72Show/hide
Query:  TTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSATLSAA-GLKKSALRQIPVAVYGSESGLEIRETDCP
        T A P     + ++  N A+ DT+MVIILAALLCALICALG+NS++RC LRC+RRF           + A G+KK AL+ IPV  Y  E  L+++ T+C 
Subjt:  TTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSATLSAA-GLKKSALRQIPVAVYGSESGLEIRETDCP

Query:  ICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQS
        ICLGDF+ GE ++VLPKCNHGFHV+C+DTWL SHSSCPTCRQSL+E Q+
Subjt:  ICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQS

Q9LZV8 RING-H2 finger protein ATL744.8e-3952.9Show/hide
Query:  LHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSATLS-AAGLKKSALRQIPVAVYGSESG
        +HR LL +      ++G+   + +  + NFD NMVIILAALLCALI ALGLNSI+RCA+RC   F   +   + T++  AGLKK  L++ PVA YGS   
Subjt:  LHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSATLS-AAGLKKSALRQIPVAVYGSESG

Query:  LEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE
        ++I  T+C ICLG+F  GE+++VLP CNH FH+ C+DTWL SHSSCP CR SL+E
Subjt:  LEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE

Q9SG96 RING-H2 finger protein ATL725.2e-4152.25Show/hide
Query:  LLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT---------LSAAGLKKSALRQIPVAVYG
        LL       P+N         N+  FDTNMVIILAALLCALICAL LNS +RC LR +RRF  +    +A+          +A GLKK AL+QIPV +YG
Subjt:  LLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT---------LSAAGLKKSALRQIPVAVYG

Query:  SESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEI
        S   ++++ T+C ICLGDF  GEK++VLPKCNHGFHVRC+DTWL S SSCPTCRQSL+ +Q S        E+    I
Subjt:  SESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEI

Arabidopsis top hitse value%identityAlignment
AT1G49220.1 RING/U-box superfamily protein1.3e-3148.12Show/hide
Query:  NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT----LSAAGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKIK
        +E N   N++++L+ L+C +IC LGL+ I+RCALR S RF       S +     S  G+KK ALR  PV  Y  E  L   + +C ICL DF++GE+++
Subjt:  NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT----LSAAGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKIK

Query:  VLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE
        +LPKCNHGFHVRC+D WL  H +CP CR  LVE
Subjt:  VLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE

AT1G49230.1 RING/U-box superfamily protein2.7e-3747.4Show/hide
Query:  RNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGS--ATLSAAGLKKSALRQIPVAVYGSESGL
        R LL+      P   T   + +  + NFD N+V++L+ LLCAL+C+LGLNSI+RCALRCS     E GG +    L+  G+K+ AL+      Y +E  L
Subjt:  RNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGS--ATLSAAGLKKSALRQIPVAVYGSESGL

Query:  EIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE
           +T+C ICL +F+A E++K+LP C+HGFHVRC+D WL+SHSSCPTCR  L++
Subjt:  EIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE

AT3G10910.1 RING/U-box superfamily protein3.7e-4252.25Show/hide
Query:  LLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT---------LSAAGLKKSALRQIPVAVYG
        LL       P+N         N+  FDTNMVIILAALLCALICAL LNS +RC LR +RRF  +    +A+          +A GLKK AL+QIPV +YG
Subjt:  LLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSAT---------LSAAGLKKSALRQIPVAVYG

Query:  SESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEI
        S   ++++ T+C ICLGDF  GEK++VLPKCNHGFHVRC+DTWL S SSCPTCRQSL+ +Q S        E+    I
Subjt:  SESGLEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEI

AT5G01880.1 RING/U-box superfamily protein3.4e-4052.9Show/hide
Query:  LHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSATLS-AAGLKKSALRQIPVAVYGSESG
        +HR LL +      ++G+   + +  + NFD NMVIILAALLCALI ALGLNSI+RCA+RC   F   +   + T++  AGLKK  L++ PVA YGS   
Subjt:  LHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSATLS-AAGLKKSALRQIPVAVYGSESG

Query:  LEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE
        ++I  T+C ICLG+F  GE+++VLP CNH FH+ C+DTWL SHSSCP CR SL+E
Subjt:  LEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVE

AT5G05280.1 RING/U-box superfamily protein2.8e-4257.72Show/hide
Query:  TTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSATLSAA-GLKKSALRQIPVAVYGSESGLEIRETDCP
        T A P     + ++  N A+ DT+MVIILAALLCALICALG+NS++RC LRC+RRF           + A G+KK AL+ IPV  Y  E  L+++ T+C 
Subjt:  TTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSATLSAA-GLKKSALRQIPVAVYGSESGLEIRETDCP

Query:  ICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQS
        ICLGDF+ GE ++VLPKCNHGFHV+C+DTWL SHSSCPTCRQSL+E Q+
Subjt:  ICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGTGTCCGATCACCACCGTCACCGTCTCCACCGCAACCTCCTCTACGCCGACACGACGGCGCCGCCATCGAATGGAACCCGAACGCACAATTCGTTCAACAA
CGAAGCCAATTTCGACACGAATATGGTGATAATCCTCGCGGCGTTACTCTGCGCTTTGATTTGCGCTCTCGGACTGAACTCGATCGTCCGCTGCGCCCTCCGCTGTAGCC
GGCGGTTCGCCTTCGAGACCGGTGGCGGCTCTGCCACCCTCTCCGCCGCAGGGCTGAAGAAAAGCGCATTACGACAAATTCCGGTTGCCGTTTACGGGTCGGAGTCGGGT
CTTGAGATCCGAGAAACGGATTGCCCGATCTGCCTTGGAGATTTCATTGCCGGTGAGAAAATCAAGGTGCTTCCGAAATGTAACCATGGATTTCACGTACGATGTGTCGA
CACATGGTTGGCTTCCCACTCGTCGTGTCCGACATGTCGTCAGTCGCTGGTCGAACAACAGTCGAGTTCCGAACCAGCGGAAGCGGAACCCGAAAATCGACCAGCCGAAA
TTTCTTCGGGCGGCGGCCAAGGTGAGATATCAGTAACTGTAGATGAAATTAGCTGA
mRNA sequenceShow/hide mRNA sequence
TGGGGATCAGATACCATAACAGGGCAGTTTCTGTCTCTGTTCTTCTCAATTAATAATGCAACCCCATTTGCTTCTAATTATTGCCTAGCCCATCTCTTCCTCTTTACCTT
TATGTTTCATTACAATATACCCATTTTTCCTTCCCTTTTTGCTGTTAATTTCTTGTCCATATCCCATTTCAAACACCCCCCATCTATTCTTTTCTTCTTCTTCTTCTCTT
GATTTGGGGAAAATCTCTCTGGGTGTTCTTAGTTTCTTACAGGGGAATTGGGTTTTGGTGAAGCTAAAAGTTTTTTCTGTTCTTTTGATGTTCTATCCTGATTCTTCTTA
GGAGATCTTCTATGGAAAACCAAGCTTTTGGCCAGTCCTTGTGTTGTGAGTGACCATTAAAGATGCTTTGGAACTTTGTTTGAATCCTAAAAGCTGTTTGATTTAACTCT
TAAAGGATCATCATTCAACATCCTTTCTAGTTGAAGGTAGATCAGGAAGAATCAAATCACAGCCCCCCTTCTACAGTTTGAGCTTTGATTGAGGTTCAGAAAAAAGAGCT
TGAGCTTTGATTGGTGTATCAGTGATATGAATTTTCTACTTTCAATCTCTTTCGTGGTTCGATTTGCTTAACAAACAATCATGGGGTTACGAATTTAAACAATCAAGTTT
CTCAGAGGAATTTCATCAAACAGTTTCAAGATCTGAAGTAAATTACCTTTGGAGAAATCATTTGTTGTTGTTGTTGTTTTGAGGTAGTGAGCAGCTGCTATGGCGATGGT
GTCCGATCACCACCGTCACCGTCTCCACCGCAACCTCCTCTACGCCGACACGACGGCGCCGCCATCGAATGGAACCCGAACGCACAATTCGTTCAACAACGAAGCCAATT
TCGACACGAATATGGTGATAATCCTCGCGGCGTTACTCTGCGCTTTGATTTGCGCTCTCGGACTGAACTCGATCGTCCGCTGCGCCCTCCGCTGTAGCCGGCGGTTCGCC
TTCGAGACCGGTGGCGGCTCTGCCACCCTCTCCGCCGCAGGGCTGAAGAAAAGCGCATTACGACAAATTCCGGTTGCCGTTTACGGGTCGGAGTCGGGTCTTGAGATCCG
AGAAACGGATTGCCCGATCTGCCTTGGAGATTTCATTGCCGGTGAGAAAATCAAGGTGCTTCCGAAATGTAACCATGGATTTCACGTACGATGTGTCGACACATGGTTGG
CTTCCCACTCGTCGTGTCCGACATGTCGTCAGTCGCTGGTCGAACAACAGTCGAGTTCCGAACCAGCGGAAGCGGAACCCGAAAATCGACCAGCCGAAATTTCTTCGGGC
GGCGGCCAAGGTGAGATATCAGTAACTGTAGATGAAATTAGCTGATTTCTAGGGTTTGCATTTGCACATAAAATATTCTTTATTTGTTTGCAGTTTTTTTTAGCTTTTTT
TTT
Protein sequenceShow/hide protein sequence
MAMVSDHHRHRLHRNLLYADTTAPPSNGTRTHNSFNNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETGGGSATLSAAGLKKSALRQIPVAVYGSESG
LEIRETDCPICLGDFIAGEKIKVLPKCNHGFHVRCVDTWLASHSSCPTCRQSLVEQQSSSEPAEAEPENRPAEISSGGGQGEISVTVDEIS