| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004138390.1 DNA-directed RNA polymerase II subunit 4 [Cucumis sativus] | 9.5e-68 | 97.1 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVRE+LSRYQLAEFELCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Query: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
TVEEAIAMVPSLKTKGR HDDEAIEKMLNDLSLIK+F+
Subjt: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| XP_022133507.1 DNA-directed RNA polymerase II subunit 4 [Momordica charantia] | 5.6e-68 | 98.55 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDP NQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Query: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKF+
Subjt: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| XP_022939401.1 DNA-directed RNA polymerase II subunit 4-like [Cucurbita moschata] | 2.5e-68 | 98.55 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Query: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
TVEEAI+MVPSLKTKGRAHDDEAIEKMLNDLSLIKKF+
Subjt: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| XP_030924038.1 DNA-directed RNA polymerase II subunit 4 [Quercus lobata] | 2.1e-67 | 97.1 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQMSEDP NQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Query: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
TVEEAIAMVPS+KTKGRAHDDEAIEKMLNDLSLIKKF+
Subjt: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| XP_038884885.1 DNA-directed RNA polymerase II subunit 4 [Benincasa hispida] | 7.3e-68 | 97.83 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Query: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
TVEEAIAMVPSLKTKGR HDDEAIEKMLNDLSLIK+F+
Subjt: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K7V5 RPOL4c domain-containing protein | 4.6e-68 | 97.1 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVRE+LSRYQLAEFELCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Query: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
TVEEAIAMVPSLKTKGR HDDEAIEKMLNDLSLIK+F+
Subjt: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| A0A5D3C019 DNA-directed RNA polymerase II subunit 4 | 4.6e-68 | 97.1 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVRE+LSRYQLAEFELCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Query: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
TVEEAIAMVPSLKTKGR HDDEAIEKMLNDLSLIK+F+
Subjt: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| A0A6J1BWW4 DNA-directed RNA polymerase II subunit 4 | 2.7e-68 | 98.55 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDP NQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Query: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKF+
Subjt: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| A0A6J1FFS7 DNA-directed RNA polymerase II subunit 4-like | 1.2e-68 | 98.55 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Query: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
TVEEAI+MVPSLKTKGRAHDDEAIEKMLNDLSLIKKF+
Subjt: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| A0A6J1JVN3 DNA-directed RNA polymerase II subunit 4-like | 1.2e-68 | 98.55 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Query: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
TVEEAI+MVPSLKTKGRAHDDEAIEKMLNDLSLIKKF+
Subjt: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O15514 DNA-directed RNA polymerase II subunit RPB4 | 3.1e-21 | 41.18 | Show/hide |
Query: SGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPET
+G+ EE+A++L EF A+ L+N EV ++LEH+ +Q + S + ++S+VF K+L Y RFSR+KN + + VR +L + +L +FEL L NLCPET
Subjt: SGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPET
Query: VEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKF
EE+ A++PSL +GR +DE ++++L+D+ + F
Subjt: VEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKF
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| O48890 DNA-directed RNA polymerase II subunit 4 | 2.6e-68 | 93.48 | Show/hide |
Query: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHK+EQLQQ+SEDP NQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSR+QL EFELCVLGNLCPE
Subjt: MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPE
Query: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
TVEEA+AMVPSLKTKGRAHDDEAIEKMLNDLSL+K+F+
Subjt: TVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 1.9e-18 | 36.49 | Show/hide |
Query: EEEENAAELKIGDEFLKAKCLMNCEVSLILEHK----------YEQ---LQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFE
+EEE+ LK + AK L+N EV+++LEH+ + Q L + + N + + F K+L Y ++FSRYKN +++QVR LS+ L EFE
Subjt: EEEENAAELKIGDEFLKAKCLMNCEVSLILEHK----------YEQ---LQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFE
Query: LCVLGNLCPETVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
+ L NLCPE +EA +++PSLK +D+ ++ +L++LS ++KF+
Subjt: LCVLGNLCPETVEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKFD
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| Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 | 3.1e-21 | 41.18 | Show/hide |
Query: SGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPET
+G+ EE+A++L EF A+ L+N EV ++LEH+ +Q + S + ++S+VF K+L Y RFSR+KN + + VR +L + +L +FEL L NLCPET
Subjt: SGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPET
Query: VEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKF
EE+ A++PSL +GR +DE ++++L+D+ + F
Subjt: VEEAIAMVPSLKTKGRAHDDEAIEKMLNDLSLIKKF
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| Q9VEA5 DNA-directed RNA polymerase II subunit Rpb4 | 1.0e-16 | 38.89 | Show/hide |
Query: EENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA
+E+AA+L+ EF A+ L+ EV ++L+H+ + Q S D + S+VF K+ Y F ++KN + + R +L + +L +FEL LGNLCPE EEA
Subjt: EENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA
Query: IAMVPSLKTKGRAHDDEAIEKMLNDL
A++PSL +GR +DE + ++L+D+
Subjt: IAMVPSLKTKGRAHDDEAIEKMLNDL
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