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Sed0026157 (gene) of Chayote v1 genome

Gene IDSed0026157
OrganismSechium edule (Chayote v1)
DescriptionPotassium voltage-gated channel subfamily C member 4
Genome locationLG09:9050..10128
RNA-Seq ExpressionSed0026157
SyntenySed0026157
Gene Ontology termsNA
InterPro domainsIPR011011 - Zinc finger, FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3440050.1 hypothetical protein FNV43_RR18328 [Rhamnella rubrinervis]8.8e-3561.6Show/hide
Query:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT-----SSGRLPPPPPPPTAAARSEYSGDRTIKNHHHAD----
        MVD + VCCMCGD+GFP+KLFRCN CRNRFQHSYCSNYY+E+AE I++CDWC SEG++     SS +    P   + + RSEYSGD+ IK H   D    
Subjt:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT-----SSGRLPPPPPPPTAAARSEYSGDRTIKNHHHAD----

Query:  --KPKHASSPRPTTRRYKLLKDVMC
           P  A SPRPTTRRYKLLKDVMC
Subjt:  --KPKHASSPRPTTRRYKLLKDVMC
XP_004140491.1 uncharacterized protein LOC101205257 [Cucumis sativus]2.2e-3865.38Show/hide
Query:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT------SSGRLPPPPPPPTAA--ARSEYSGDRTIKNHHH---
        MVD ++VCCMCGDIGFP+KLF CN CRNRFQHSYCSNYY+ESAEPI+VCDWC  EGR+      SS R PP           RSEYSGD+ IK+HHH   
Subjt:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT------SSGRLPPPPPPPTAA--ARSEYSGDRTIKNHHH---

Query:  ADKPKH-----ASSPRPTTRRYKLLKDVMC
         +K KH      SSPRPTTRRYKLLKDVMC
Subjt:  ADKPKH-----ASSPRPTTRRYKLLKDVMC
XP_008467003.1 PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo]1.6e-3663.91Show/hide
Query:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTSSGR------LPPPPPPPTAA----ARSEYSGDRTIKNHHHA
        MVD ++VCCMCGDIGFP+KLF CN CRNRFQHSYCSNYY+ESAEPI+VCDWC  EGR++S R         PP   T A    +RSEYS D+ IK HHH 
Subjt:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTSSGR------LPPPPPPPTAA----ARSEYSGDRTIKNHHHA

Query:  DKP----KHAS-----SPRPTTRRYKLLKDVMC
        D P    KH       SPRPTTRRYKLLKDVMC
Subjt:  DKP----KHAS-----SPRPTTRRYKLLKDVMC
XP_022158531.1 uncharacterized protein LOC111024997 [Momordica charantia]6.1e-3661.65Show/hide
Query:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT------SSGRLPPPPPPPTAA-----ARSEYSGDRTIKNHHH
        MVD ++VCCMCGDIGFP+KLFRCN CRNRFQHSYCSNYY+ESAEPI+VCDWC  EGR+      SS +  PPPPP          RS+Y+  +      H
Subjt:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT------SSGRLPPPPPPPTAA-----ARSEYSGDRTIKNHHH

Query:  ---ADKPKHAS-----SPRPTTRRYKLLKDVMC
           ADK KHA      SPRPTTRRYKLLKDVMC
Subjt:  ---ADKPKHAS-----SPRPTTRRYKLLKDVMC
XP_038875571.1 uncharacterized protein LOC120067983 [Benincasa hispida]7.9e-3663.64Show/hide
Query:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT------SSGRLPPPPPPPTAA--ARSEYSGDRTIKNHHH---
        MVD ++VCCMCGDIGFP+KLFRCN C NRFQHSYCSNYY+ESAEPI+VCDWC  EGRT      SS R PP      A   +RSEYSG++ IK+HH    
Subjt:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT------SSGRLPPPPPPPTAA--ARSEYSGDRTIKNHHH---

Query:  --ADKPKHAS-----SPRPTTRRYKLLKDVMC
           +K KH       SPRPTTRRYKLLKDVMC
Subjt:  --ADKPKHAS-----SPRPTTRRYKLLKDVMC
TrEMBL top hitse value%identityAlignment
A0A0A0KFQ0 Uncharacterized protein1.1e-3865.38Show/hide
Query:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT------SSGRLPPPPPPPTAA--ARSEYSGDRTIKNHHH---
        MVD ++VCCMCGDIGFP+KLF CN CRNRFQHSYCSNYY+ESAEPI+VCDWC  EGR+      SS R PP           RSEYSGD+ IK+HHH   
Subjt:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT------SSGRLPPPPPPPTAA--ARSEYSGDRTIKNHHH---

Query:  ADKPKH-----ASSPRPTTRRYKLLKDVMC
         +K KH      SSPRPTTRRYKLLKDVMC
Subjt:  ADKPKH-----ASSPRPTTRRYKLLKDVMC
A0A1S3CSH8 uncharacterized protein LOC1035044137.7e-3763.91Show/hide
Query:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTSSGR------LPPPPPPPTAA----ARSEYSGDRTIKNHHHA
        MVD ++VCCMCGDIGFP+KLF CN CRNRFQHSYCSNYY+ESAEPI+VCDWC  EGR++S R         PP   T A    +RSEYS D+ IK HHH 
Subjt:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTSSGR------LPPPPPPPTAA----ARSEYSGDRTIKNHHHA

Query:  DKP----KHAS-----SPRPTTRRYKLLKDVMC
        D P    KH       SPRPTTRRYKLLKDVMC
Subjt:  DKP----KHAS-----SPRPTTRRYKLLKDVMC
A0A6J1E160 uncharacterized protein LOC1110249972.9e-3661.65Show/hide
Query:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT------SSGRLPPPPPPPTAA-----ARSEYSGDRTIKNHHH
        MVD ++VCCMCGDIGFP+KLFRCN CRNRFQHSYCSNYY+ESAEPI+VCDWC  EGR+      SS +  PPPPP          RS+Y+  +      H
Subjt:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRT------SSGRLPPPPPPPTAA-----ARSEYSGDRTIKNHHH

Query:  ---ADKPKHAS-----SPRPTTRRYKLLKDVMC
           ADK KHA      SPRPTTRRYKLLKDVMC
Subjt:  ---ADKPKHAS-----SPRPTTRRYKLLKDVMC
A0A6J1H4E1 uncharacterized protein LOC1114603019.4e-3561.36Show/hide
Query:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTS------SGRLPPP--PPPPTAAARSEYSGDRTIKNHHH---
        MVD ++VCC+CGD+GFP+KLFRC  C NRFQHSYCSNYY+ESAEPI+VCDWC  EGR+S      S R PPP    P    +RS YSGD+ IK+HH    
Subjt:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTS------SGRLPPP--PPPPTAAARSEYSGDRTIKNHHH---

Query:  --ADKPKH-----ASSPRPTTRRYKLLKDVMC
           DK K       +SPRPTTRRYKLLKDVMC
Subjt:  --ADKPKH-----ASSPRPTTRRYKLLKDVMC
A0A6J1L0S8 uncharacterized protein LOC1114993265.5e-3562.12Show/hide
Query:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTS------SGRLPPPPPPPTAA--ARSEYSGDRTIKNHHH---
        MVD ++VCC+CGD+GFP+KLFRC  C NRFQHSYCSNYY+ESAEPI+VCDWC  EGR+S      S R PPP     A   +RS YSGD+ IK+HH    
Subjt:  MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTS------SGRLPPPPPPPTAA--ARSEYSGDRTIKNHHH---

Query:  --ADKPKH-----ASSPRPTTRRYKLLKDVMC
           DK K      A SPRPTTRRYKLLKDVMC
Subjt:  --ADKPKH-----ASSPRPTTRRYKLLKDVMC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein1.4e-2548.46Show/hide
Query:  EMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTSS-----GRLPPPPPPPTA------AARSEYSGDRTIK--NHHHAD
        E VCCMCGD+GF +KLF C +CR RFQHSYCSNYY + AEP ++CDWC S+ R  S     G      P  +       + RSEYS    IK  N+ H  
Subjt:  EMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTSS-----GRLPPPPPPPTA------AARSEYSGDRTIK--NHHHAD

Query:  KPK-------HASSPRPTTRRYKLLKDVMC
          K         +SP+  TRRYKLLKDVMC
Subjt:  KPK-------HASSPRPTTRRYKLLKDVMC
AT3G60520.1 unknown protein6.1e-2651.16Show/hide
Query:  MVDRE-MVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTSSG-RLPPPPPPPTAAARSEYSG-DRTIKNHH---------
        MVD E  VCCMCGD+GF +KLF C+ C NRFQHSYCS+YY E A+PI +CDWC  E ++ +G +          + RSEYS     IK            
Subjt:  MVDRE-MVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTSSG-RLPPPPPPPTAAARSEYSG-DRTIKNHH---------

Query:  --HADKPK-HASSPRPTTRRYKLLKDVMC
           ADK K    SPRP TRRYKLLKDVMC
Subjt:  --HADKPK-HASSPRPTTRRYKLLKDVMC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATCGTGAGATGGTTTGTTGCATGTGCGGCGACATCGGCTTCCCTGAGAAACTGTTCCGATGCAACAACTGCCGCAACCGCTTTCAACACTCGTACTGCAGTAA
TTACTACACTGAATCCGCGGAACCAATTGATGTGTGTGATTGGTGCCACTCTGAAGGCCGCACTTCCTCCGGGAGACTTCCGCCGCCGCCGCCGCCCCCTACCGCCGCCG
CCCGCTCCGAATATTCCGGCGACAGGACCATCAAGAACCACCATCATGCCGACAAACCCAAACACGCCTCCTCGCCCAGGCCCACCACCCGCAGGTACAAGCTTCTAAAG
GACGTCATGTGCTAA
mRNA sequenceShow/hide mRNA sequence
GGATATTTATACACCACCGACTCTTCAGACTTTGGATGCCCACAAGTTTTTGCTTATATATTCAAGTCTCTCTCTCCTGTGTTTTGTCTGTGAGAAATTAATTGGAAAAG
AAAAAGAGAAGAGATATCAATGGTGGATCGTGAGATGGTTTGTTGCATGTGCGGCGACATCGGCTTCCCTGAGAAACTGTTCCGATGCAACAACTGCCGCAACCGCTTTC
AACACTCGTACTGCAGTAATTACTACACTGAATCCGCGGAACCAATTGATGTGTGTGATTGGTGCCACTCTGAAGGCCGCACTTCCTCCGGGAGACTTCCGCCGCCGCCG
CCGCCCCCTACCGCCGCCGCCCGCTCCGAATATTCCGGCGACAGGACCATCAAGAACCACCATCATGCCGACAAACCCAAACACGCCTCCTCGCCCAGGCCCACCACCCG
CAGGTACAAGCTTCTAAAGGACGTCATGTGCTAAAATAAAAACAGAGCAAAACTACCCACTTGTTCGTAACTATGGTGTGTACTAACCACCACATGAGTCGCGTCTTTCT
GACTAATAGAAATAAAAATGCTGGATGAAAAATACATAAATAAAAAAAATATGGCTCATGTCGTGGTAAGTATACATACCATACTTATCGTTAAGTTAAAAGTTGGTAGG
CTTTTGCTAGATGGATAAACACCTTTTACATAGCCCCTCCCATCCACTTCCTTTTTTTTTCTTTCTTTCTCAAATGTTATATTAATAAAAACGTATATATCTATAAGTAT
AGGTTGCTTTTGAGTGTGCTGATTGGGTTTATATGTAGAAATACTCCATGAATTTTGCTTTCTTTTATATATAATGTGTTATGAATATAATATCATATAGTTTTCGCTTT
ACAACTCCAAATAAACTTAATGTTATTGTAATGCATCATCTTTCTCTCTTACTCAATTTCCGTACAAATCTATAATCAACTTTTAACATTCGGGTGGCGTTTATTCTACA
TTCTTTCGC
Protein sequenceShow/hide protein sequence
MVDREMVCCMCGDIGFPEKLFRCNNCRNRFQHSYCSNYYTESAEPIDVCDWCHSEGRTSSGRLPPPPPPPTAAARSEYSGDRTIKNHHHADKPKHASSPRPTTRRYKLLK
DVMC