; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026209 (gene) of Chayote v1 genome

Gene IDSed0026209
OrganismSechium edule (Chayote v1)
Descriptionnuclear transcription factor Y subunit C-9
Genome locationLG04:47555262..47558519
RNA-Seq ExpressionSed0026209
SyntenySed0026209
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450660.1 PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo]4.6e-12490.38Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK
        MDQQGHGQ PSMG VGSGG IAYGSNLY+PNQM VGPTSGSVVTSVGGIQS   PGGAQLAQHQLAYQHIHQQQQQQLQQQLQ FW NQ+Q+IEKVTDFK
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG +TVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ
        GPGD +PY YMP+ HAPQVGAPGMIMGKP+MDPAMYA QSHPYM  QMWQ+ QDQAPPDQ
Subjt:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ

XP_022157074.1 nuclear transcription factor Y subunit C-9 [Momordica charantia]2.1e-12991.15Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK
        MDQQGHGQPPSMG VGSGG +AYGSNLY+P+QMTVGPTSGSVVTSVGGIQS   P GAQLAQHQLAYQHIHQQQQQQLQQQLQ FW NQ+Q+IEKVTDFK
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG ITVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ
        GPGDA+PYCYMP+ HAPQVGAPGMIMGKP+MDP MYAQQSHPYMP QMWQ+ QDQAPP+Q
Subjt:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ

XP_022933523.1 nuclear transcription factor Y subunit C-9-like [Cucurbita moschata]1.4e-12891.15Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK
        MDQQGHGQP SMG VGSGG IAYGSNLY+P Q+TVG TSGSVVTSVGGIQS   PGGAQL QHQLAYQHIHQQQQQQLQQQLQ FW NQ+Q+IEKVTDFK
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG ITVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ
        GPGDA+PYCYMP+ HAPQVGAPGMIMGKP+MDPA+YAQQSHPYMP QMWQ+TQDQAPPDQ
Subjt:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ

XP_031735973.1 nuclear transcription factor Y subunit C-9 [Cucumis sativus]1.7e-12690.77Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK
        MDQQGHGQPPSMG VGSGG IAYGSNLY+PNQM+VGPTSGSVVTSVGGIQS   PGGAQLAQHQLAYQHIHQQQQQQLQQQLQ FW NQ+Q+IEKVTDFK
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG +TVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ
        GPGD +PY YMP+ HAPQVGAPGMIMGKP+MDPAMYA QSHPYM  QMWQ+ QDQAPPDQ
Subjt:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ

XP_038879069.1 nuclear transcription factor Y subunit C-9 [Benincasa hispida]4.8e-12990.77Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK
        MDQQGHGQPPSMG VGSGG +AYGSNLY+P+QMTVGPTSGSVVTSVGGIQS   PGGAQLAQHQLAYQHIHQQQQQQLQQQLQ FW NQ+Q+IEKVTDFK
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG +TVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ
        GPG+A+PYCYMP+ HAPQVGAPGMIMGKP+MDP MYA QSHPYMP QMWQ+ QDQAPPDQ
Subjt:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ

TrEMBL top hitse value%identityAlignment
A0A0A0LW22 CBFD_NFYB_HMF domain-containing protein8.2e-12790.77Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK
        MDQQGHGQPPSMG VGSGG IAYGSNLY+PNQM+VGPTSGSVVTSVGGIQS   PGGAQLAQHQLAYQHIHQQQQQQLQQQLQ FW NQ+Q+IEKVTDFK
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG +TVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ
        GPGD +PY YMP+ HAPQVGAPGMIMGKP+MDPAMYA QSHPYM  QMWQ+ QDQAPPDQ
Subjt:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ

A0A1S3BQR3 nuclear transcription factor Y subunit C-92.2e-12490.38Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK
        MDQQGHGQ PSMG VGSGG IAYGSNLY+PNQM VGPTSGSVVTSVGGIQS   PGGAQLAQHQLAYQHIHQQQQQQLQQQLQ FW NQ+Q+IEKVTDFK
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG +TVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ
        GPGD +PY YMP+ HAPQVGAPGMIMGKP+MDPAMYA QSHPYM  QMWQ+ QDQAPPDQ
Subjt:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ

A0A6J1DS47 nuclear transcription factor Y subunit C-91.0e-12991.15Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK
        MDQQGHGQPPSMG VGSGG +AYGSNLY+P+QMTVGPTSGSVVTSVGGIQS   P GAQLAQHQLAYQHIHQQQQQQLQQQLQ FW NQ+Q+IEKVTDFK
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG ITVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ
        GPGDA+PYCYMP+ HAPQVGAPGMIMGKP+MDP MYAQQSHPYMP QMWQ+ QDQAPP+Q
Subjt:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ

A0A6J1F001 nuclear transcription factor Y subunit C-9-like6.7e-12991.15Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK
        MDQQGHGQP SMG VGSGG IAYGSNLY+P Q+TVG TSGSVVTSVGGIQS   PGGAQL QHQLAYQHIHQQQQQQLQQQLQ FW NQ+Q+IEKVTDFK
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG ITVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ
        GPGDA+PYCYMP+ HAPQVGAPGMIMGKP+MDPA+YAQQSHPYMP QMWQ+TQDQAPPDQ
Subjt:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ

A0A6J1HZ39 nuclear transcription factor Y subunit C-9-like6.7e-12991.15Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK
        MDQQGHGQP SMG VGSGG IAYGSNLY+P Q+TVG TSGSVVTSVGGIQS   PGGAQL QHQLAYQHIHQQQQQQLQQQLQ FW NQ+Q+IEKVTDFK
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG
        NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRG ITVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVG

Query:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ
        GPGDA+PYCYMP+ HAPQVGAPGMIMGKP+MDPA+YAQQSHPYMP QMWQ+TQDQAPPDQ
Subjt:  GPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-41.1e-5454.3Show/hide
Query:  PSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQ--LAQHQLAY---QHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFKNHSL
        P++GVV  G  +      Y P      PT+ +V+ + G   +P  P       AQHQL Y   Q  HQQ QQQ Q+QLQ FW  +  DIE+ TDFKNHSL
Subjt:  PSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQ--LAQHQLAY---QHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFKNHSL

Query:  PLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGD
        PLARIKKIMKADEDVRMISAEAPV+FA+ACE+FILELTLRSW HTEENKRRTLQKNDIAAAITRTD++DFLVDIVPR+DLK+E +     G   +G P D
Subjt:  PLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGD

Query:  AVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ
        + PY Y    + PQ   PG  +       A   QQ HP    Q  Q  Q++ P +Q
Subjt:  AVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ

Q8L4B2 Nuclear transcription factor Y subunit C-92.8e-7163.5Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIH-QQQQQQLQQQLQAFWTNQHQDIEKVTDF
        MDQQ HGQ          G + YG+N Y  N     P S +  T  GG   PG          QLA+  IH QQQQQQL QQLQAFW NQ ++IEK TDF
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIH-QQQQQQLQQQLQAFWTNQHQDIEKVTDF

Query:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV
        KNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL SIPRG +  
Subjt:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV

Query:  GGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAP--PDQ
               PY Y+PA  AP +G PGM+MG P       A   +PYM Q MW   Q QAP  PDQ
Subjt:  GGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAP--PDQ

Q9FMV5 Nuclear transcription factor Y subunit C-46.9e-5456.9Show/hide
Query:  NLYNPNQMTVGPTS----GSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFKNHSLPLARIKKIMKADEDVRM
        N  N N     PTS    GS VT+V  I  P     + +      Y H+ QQQQQQLQ     FWT Q Q+IE+V DFKNH LPLARIKKIMKADEDVRM
Subjt:  NLYNPNQMTVGPTS----GSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFKNHSLPLARIKKIMKADEDVRM

Query:  ISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEV-LTSIPRGPITVGGPGDAVPYCYMPASHAPQVG
        ISAEAP+LFA+ACE+FILELT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE++K+E    S   G   V      VPY Y P       G
Subjt:  ISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEV-LTSIPRGPITVGGPGDAVPYCYMPASHAPQVG

Query:  APGMIMGKPMMDPAMYAQQSHPYMPQQMWQNT
          GM++G+P MDP+    Q      Q +WQN+
Subjt:  APGMIMGKPMMDPAMYAQQSHPYMPQQMWQNT

Q9SMP0 Nuclear transcription factor Y subunit C-19.0e-5459.62Show/hide
Query:  SVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLR
        S  GI  P        A    +Y H+ QQQ    QQQLQ FWT Q Q+IE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+R
Subjt:  SVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLR

Query:  SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDP-AMYAQQSHPY
        SW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+++KDE   ++  G + V      VPY Y P       G  GM++G+P MDP  +Y Q     
Subjt:  SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDP-AMYAQQSHPY

Query:  MPQQMWQN
         P Q WQ+
Subjt:  MPQQMWQN

Q9ZVL3 Nuclear transcription factor Y subunit C-36.0e-6661.22Show/hide
Query:  GSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFKNHSLPLARIKKIMKA
        G    + YGSN Y  N MT  PT               HP          AY  IHQQQQQQL QQLQ+FW  Q ++IEK TDFKNHSLPLARIKKIMKA
Subjt:  GSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFKNHSLPLARIKKIMKA

Query:  DEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDAVPYCYMPASH
        DEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL  +     T  G     PY Y+P   
Subjt:  DEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDAVPYCYMPASH

Query:  APQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNT-QDQAPPD
        AP +G PGM+MG P   P       +PYM Q MWQ    +Q  PD
Subjt:  APQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNT-QDQAPPD

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C92.0e-7263.5Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIH-QQQQQQLQQQLQAFWTNQHQDIEKVTDF
        MDQQ HGQ          G + YG+N Y  N     P S +  T  GG   PG          QLA+  IH QQQQQQL QQLQAFW NQ ++IEK TDF
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIH-QQQQQQLQQQLQAFWTNQHQDIEKVTDF

Query:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV
        KNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL SIPRG +  
Subjt:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV

Query:  GGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAP--PDQ
               PY Y+PA  AP +G PGM+MG P       A   +PYM Q MW   Q QAP  PDQ
Subjt:  GGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAP--PDQ

AT1G08970.2 nuclear factor Y, subunit C92.0e-7263.5Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIH-QQQQQQLQQQLQAFWTNQHQDIEKVTDF
        MDQQ HGQ          G + YG+N Y  N     P S +  T  GG   PG          QLA+  IH QQQQQQL QQLQAFW NQ ++IEK TDF
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIH-QQQQQQLQQQLQAFWTNQHQDIEKVTDF

Query:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV
        KNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL SIPRG +  
Subjt:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV

Query:  GGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAP--PDQ
               PY Y+PA  AP +G PGM+MG P       A   +PYM Q MW   Q QAP  PDQ
Subjt:  GGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAP--PDQ

AT1G08970.3 nuclear factor Y, subunit C92.0e-7263.5Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIH-QQQQQQLQQQLQAFWTNQHQDIEKVTDF
        MDQQ HGQ          G + YG+N Y  N     P S +  T  GG   PG          QLA+  IH QQQQQQL QQLQAFW NQ ++IEK TDF
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIH-QQQQQQLQQQLQAFWTNQHQDIEKVTDF

Query:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV
        KNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL SIPRG +  
Subjt:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV

Query:  GGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAP--PDQ
               PY Y+PA  AP +G PGM+MG P       A   +PYM Q MW   Q QAP  PDQ
Subjt:  GGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAP--PDQ

AT1G08970.4 nuclear factor Y, subunit C92.0e-7263.5Show/hide
Query:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIH-QQQQQQLQQQLQAFWTNQHQDIEKVTDF
        MDQQ HGQ          G + YG+N Y  N     P S +  T  GG   PG          QLA+  IH QQQQQQL QQLQAFW NQ ++IEK TDF
Subjt:  MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIH-QQQQQQLQQQLQAFWTNQHQDIEKVTDF

Query:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV
        KNHSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL SIPRG +  
Subjt:  KNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITV

Query:  GGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAP--PDQ
               PY Y+PA  AP +G PGM+MG P       A   +PYM Q MW   Q QAP  PDQ
Subjt:  GGPGDAVPYCYMPASHAPQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAP--PDQ

AT1G54830.2 nuclear factor Y, subunit C34.3e-6761.22Show/hide
Query:  GSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFKNHSLPLARIKKIMKA
        G    + YGSN Y  N MT  PT               HP          AY  IHQQQQQQL QQLQ+FW  Q ++IEK TDFKNHSLPLARIKKIMKA
Subjt:  GSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFKNHSLPLARIKKIMKA

Query:  DEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDAVPYCYMPASH
        DEDVRMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL  +     T  G     PY Y+P   
Subjt:  DEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDAVPYCYMPASH

Query:  APQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNT-QDQAPPD
        AP +G PGM+MG P   P       +PYM Q MWQ    +Q  PD
Subjt:  APQVGAPGMIMGKPMMDPAMYAQQSHPYMPQQMWQNT-QDQAPPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAGCAAGGGCATGGTCAGCCTCCATCCATGGGAGTGGTTGGCAGTGGAGGTCATATAGCATATGGTAGCAACCTGTACAATCCAAACCAAATGACTGTAGGCCC
GACTTCCGGATCTGTTGTTACATCGGTCGGAGGTATTCAGTCTCCGGGTCACCCTGGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGC
AGCAACAGCAACTTCAACAACAGCTCCAGGCTTTTTGGACAAATCAACACCAAGATATTGAGAAGGTAACTGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAG
AAGATCATGAAGGCCGACGAGGACGTACGAATGATATCAGCTGAGGCACCGGTTTTATTTGCTAGGGCATGTGAAATGTTCATCTTGGAATTGACTTTACGGTCTTGGAA
TCATACTGAAGAGAACAAGCGCAGGACACTTCAAAAGAATGATATTGCAGCAGCTATCACAAGAACTGACATTTTTGACTTTTTGGTTGATATTGTGCCAAGGGAGGATC
TGAAAGACGAAGTACTCACATCAATTCCTAGAGGACCAATAACAGTTGGAGGACCTGGAGATGCAGTTCCTTATTGTTATATGCCCGCTTCGCATGCACCTCAGGTCGGA
GCACCCGGAATGATCATGGGTAAGCCCATGATGGACCCGGCTATGTATGCTCAGCAATCGCATCCTTACATGCCGCAGCAAATGTGGCAGAACACACAAGATCAAGCCCC
TCCCGATCAATAG
mRNA sequenceShow/hide mRNA sequence
AATGAAACGAAACCATTGATGGCACTATAAAAAAGGGCCCTTTAAGCTCTGACGAATGTTGTAAGTCTGAATCCAAAACAACATACACACTCTCTCTGCTATTCCTCTTT
GCTTCCTTTCTATTTTAAGGGTCTCCAAGATCTTGTTCTGTTGGGTTTCATCTGTCTCTAAATAAGCTGTCGAGTTTATAGTGACTGTGATGGATCAGCAAGGGCATGGT
CAGCCTCCATCCATGGGAGTGGTTGGCAGTGGAGGTCATATAGCATATGGTAGCAACCTGTACAATCCAAACCAAATGACTGTAGGCCCGACTTCCGGATCTGTTGTTAC
ATCGGTCGGAGGTATTCAGTCTCCGGGTCACCCTGGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGCAGCAACAGCAACTTCAACAAC
AGCTCCAGGCTTTTTGGACAAATCAACACCAAGATATTGAGAAGGTAACTGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCCGACGAG
GACGTACGAATGATATCAGCTGAGGCACCGGTTTTATTTGCTAGGGCATGTGAAATGTTCATCTTGGAATTGACTTTACGGTCTTGGAATCATACTGAAGAGAACAAGCG
CAGGACACTTCAAAAGAATGATATTGCAGCAGCTATCACAAGAACTGACATTTTTGACTTTTTGGTTGATATTGTGCCAAGGGAGGATCTGAAAGACGAAGTACTCACAT
CAATTCCTAGAGGACCAATAACAGTTGGAGGACCTGGAGATGCAGTTCCTTATTGTTATATGCCCGCTTCGCATGCACCTCAGGTCGGAGCACCCGGAATGATCATGGGT
AAGCCCATGATGGACCCGGCTATGTATGCTCAGCAATCGCATCCTTACATGCCGCAGCAAATGTGGCAGAACACACAAGATCAAGCCCCTCCCGATCAATAGTAGCTTGC
CACACGGAGGCAAAGGAGAATTACGGAGTCTCCTTCGAAGCAATCTCACACCGTTGCCAAATCACACACGCACGCGACAGAACAACCATAGAATTTACACTGAAGATTTG
TCCGAAGCCCTGCATAATACTTCCTGTAGATATTTTGCTTGACAAGAGTAGATAATCTTGATTGAGCTAGAAAAAGTCTCTACTTTTTCTATTGATACTTCACTCTATTC
TCTTCATGTTGGTAATGACAGTAAAAAAGAATGTTGAACTTTATATGATACTTAAAATATTTGATGCATACCTTCTCATTCTCATTTAAAGAAACTGCAGTTTCC
Protein sequenceShow/hide protein sequence
MDQQGHGQPPSMGVVGSGGHIAYGSNLYNPNQMTVGPTSGSVVTSVGGIQSPGHPGGAQLAQHQLAYQHIHQQQQQQLQQQLQAFWTNQHQDIEKVTDFKNHSLPLARIK
KIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGPITVGGPGDAVPYCYMPASHAPQVG
APGMIMGKPMMDPAMYAQQSHPYMPQQMWQNTQDQAPPDQ