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Sed0026210 (gene) of Chayote v1 genome

Gene IDSed0026210
OrganismSechium edule (Chayote v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationLG04:47056744..47057406
RNA-Seq ExpressionSed0026210
SyntenySed0026210
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572087.1 hypothetical protein SDJN03_28815, partial [Cucurbita argyrosperma subsp. sororia]3.5e-4084.69Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS
        MGFRLPRIVH K+S RRSSS+G+G+  VDVPKGYFT+YVGE QKKRFVIPLSYLN+PSFQDLLSQAE+EFGYDHPMGGITIP SEDLFLDL RSL DS
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS

XP_022952259.1 auxin-induced protein 15A-like [Cucurbita moschata]1.2e-4086.73Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS
        MGFRLPRIVH K+S RRSSS+G+G+  VDVPKGYFTVYVGE QKKRFVIPLSYLN+PSFQDLLSQAEEEFGYDHPMGGITIP SEDLFLDL RSL DS
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS

XP_022969518.1 auxin-induced protein X10A-like [Cucurbita maxima]3.5e-4087Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGA--PAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS
        MGFRLPRIVH KKSL+RSSSSG+GA   AVDVPKGYFTVYVGE QKKRFVIPLSYLN+PSFQDLLSQAEEEFGY+HPMGGIT+P SED FLDL RSLNDS
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGA--PAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS

XP_023529827.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]6.0e-4085.71Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS
        MGFRLPRIV  K+SLRRSSSSG+GA AVDVPKGYFTVYVGE QKKR V+PLSYLN+PSFQDLLSQ EEEFGYDHPMGGITIP SED+FLDL RSLN+S
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS

XP_023554217.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]7.8e-4083.67Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS
        MGFRLPRIVH K+S RRSSS+G+G+  VD+PKGYFTVYVGE QKKRFVIPLSYLN+PSFQDLLSQ+E+EFGYDHPMGGITIP SEDLFLDL RSL DS
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS

TrEMBL top hitse value%identityAlignment
A0A6J1C5R3 auxin-induced protein 15A-like5.4e-3985Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGA--PAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS
        MGFRLPRIVH K+SLRRSSS+G+GA   AVDVPKGYFTVYVGE QKKRFVIPLSYLNEPSFQDLL QAEEEFGYDHPMGGITIP SED FL L +SLN+S
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGA--PAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS

A0A6J1GL57 auxin-induced protein X10A-like1.9e-3987.13Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGA--PAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLF-LDLVRSLND
        MGFRLPRIVH KKSL+RSSSSG+GA   AVDVPKGYFTVYVGE QKKRFVIPLSYLN+PSFQDLLSQAEEEFGYDHPMGGITIP SE+ F LDL RSLND
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGA--PAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLF-LDLVRSLND

Query:  S
        S
Subjt:  S

A0A6J1GL62 auxin-induced protein 15A-like5.8e-4186.73Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS
        MGFRLPRIVH K+S RRSSS+G+G+  VDVPKGYFTVYVGE QKKRFVIPLSYLN+PSFQDLLSQAEEEFGYDHPMGGITIP SEDLFLDL RSL DS
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS

A0A6J1I054 auxin-induced protein 15A-like isoform X24.2e-3982.65Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS
        MG RLPRIVH K+S R+SSS+G+G+  VDVPKGYFTVYVGE QKKRFVIPLSYLN+P+FQDLLSQAE+EFGYDHPMGGITIP SEDLFLDL RSL DS
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS

A0A6J1I180 auxin-induced protein X10A-like1.7e-4087Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGA--PAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS
        MGFRLPRIVH KKSL+RSSSSG+GA   AVDVPKGYFTVYVGE QKKRFVIPLSYLN+PSFQDLLSQAEEEFGY+HPMGGIT+P SED FLDL RSLNDS
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGA--PAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG71.3e-2461.46Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN
        MGFRLP I   +K+L  S+ + + +  +D PKGY  VYVGE   KRFVIP+S+LN+P FQDLLSQAEEEFGYDHPMGG+TIP SEDLF  +   L+
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN

P33080 Auxin-induced protein X10A1.9e-2559.79Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLND
        MGFRLP I     +  ++SS      +V+VPKGY  VYVG+ + +RF+IP+SYLN+PSFQDLL+QAEEEFGYDHPMGG+TIP  ED FL +   LND
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLND

P33081 Auxin-induced protein 15A5.6e-2562.5Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN
        MGFRLP        +R++S       A D PKGY  VYVGE + KRFVIP+SYLN+PSFQDLLSQAEEEFGYDHPMGG+TIP SED+F  +   LN
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN

P33082 Auxin-induced protein X151.6e-2460.42Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN
        MGFRLP        +R++S+      AVD PKGY  VYVGE + KRFVIP+SY+N+PSFQDLL+QAEEEFGYDHPMGG+TIP SE++F  +   LN
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN

P33083 Auxin-induced protein 6B1.6e-2462.5Show/hide
Query:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN
        MGFRLP I     S  ++SS      AVDV KGY  VYVGE + +RFVIP+SYLN+PSFQDLLSQAEEEFGY HP GG+TIP SED+F  +   LN
Subjt:  MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family8.6e-2956.57Show/hide
Query:  MGFRLPRIVHPKKSLRRSS---SSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN
        M  R+PR++   K + R +   SS S + ++DVPKGY  VYVGE   KRFV+P+SYL++PSFQDLL +AEEEFG+DHPMGG+TIP SE++F+DL    N
Subjt:  MGFRLPRIVHPKKSLRRSS---SSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN

AT5G18020.1 SAUR-like auxin-responsive protein family3.2e-2360Show/hide
Query:  KKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDL
        KK L RS+++ S A     PKG+  VYVGE QKKR+++P+SYLN+PSFQ LLS++EEEFG+DHPMGG+TIP  ED F+++
Subjt:  KKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDL

AT5G18050.1 SAUR-like auxin-responsive protein family4.1e-2358.33Show/hide
Query:  KKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSL
        KK L RS+++ S A     PKG+  VYVGE QKKR+++PLSYLN+PSFQ LLS++E+EFG+DHPMGG+TIP  ED F+++   L
Subjt:  KKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSL

AT5G18060.1 SAUR-like auxin-responsive protein family4.1e-2360Show/hide
Query:  KKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN
        KK L RS+++ S AP    PKG+  VYVGE QKKR+++PLSYLN+PSFQ LLS++EEEFG+DHPMGG+TIP  ED F+++   L+
Subjt:  KKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLN

AT5G18080.1 SAUR-like auxin-responsive protein family4.9e-2459.52Show/hide
Query:  KKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSL
        KK L RS+ +GS A     PKG+  VYVGE QKKR+++P+SYLN+PSFQ LLS++EEEFG+DHPMGG+TIP  ED F+++   L
Subjt:  KKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCCGTTTGCCTAGGATTGTTCACCCTAAGAAAAGTCTTAGACGATCTTCATCATCGGGAAGTGGAGCACCGGCAGTTGATGTTCCGAAGGGGTACTTTACAGT
TTACGTTGGCGAGGGGCAAAAGAAACGTTTTGTCATCCCACTATCTTACTTGAATGAACCCTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGTTATGATC
ATCCAATGGGTGGCATCACAATTCCTTCCAGTGAAGACCTTTTCCTCGATCTCGTTCGGAGTTTGAATGATTCATGA
mRNA sequenceShow/hide mRNA sequence
CTCATCTTTCTACCTTTGAGTGTGACCTTTGAGCAACTTAAGTCTTTCATCTATATAAGGGACAAGTAACTTGGTTCACAATCATCAAGTGTCTTCCATTCTTCTGATTA
TCATAAAAAGTTTCCAACTTTTGCACTCCTCTAAGAGTCTCATTAGTTCTCTTTGAAAGATACTGTAACATGGGTTTCCGTTTGCCTAGGATTGTTCACCCTAAGAAAAG
TCTTAGACGATCTTCATCATCGGGAAGTGGAGCACCGGCAGTTGATGTTCCGAAGGGGTACTTTACAGTTTACGTTGGCGAGGGGCAAAAGAAACGTTTTGTCATCCCAC
TATCTTACTTGAATGAACCCTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGTTATGATCATCCAATGGGTGGCATCACAATTCCTTCCAGTGAAGACCTT
TTCCTCGATCTCGTTCGGAGTTTGAATGATTCATGATCAATACAGGGATTAGAACCTGGAAATTGATAGTAAAGAAAAAAGAGTTAGAATAGTACAGAAAGAATGTAGTC
TGTAAACATTTTTTAAATGATAGAATATGATTCTTTGAATTGAAACTTTTGTCTAGGGAAGAAAGCCATTCAAGTTTTCTTTTATTTCATCTCTATGATTTGATTTAACA
CCA
Protein sequenceShow/hide protein sequence
MGFRLPRIVHPKKSLRRSSSSGSGAPAVDVPKGYFTVYVGEGQKKRFVIPLSYLNEPSFQDLLSQAEEEFGYDHPMGGITIPSSEDLFLDLVRSLNDS