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Sed0026224 (gene) of Chayote v1 genome

Gene IDSed0026224
OrganismSechium edule (Chayote v1)
DescriptionSerine-rich protein-related
Genome locationLG08:4350062..4350346
RNA-Seq ExpressionSed0026224
SyntenySed0026224
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443918.1 PREDICTED: uncharacterized protein LOC103487396 [Cucumis melo]2.1e-1861.86Show/hide
Query:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS------KGNALRAFLRQ-IKSPSTDLHRRKDFHPRPSRFFSMNNH
        MASKS S+  +   +  GSRKCLCSPT HPGSFRCSFHR+R  IS+  SSSS      K NALRAFL Q IK  S D+ RR++FHPRPSRF  MN+H
Subjt:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS------KGNALRAFLRQ-IKSPSTDLHRRKDFHPRPSRFFSMNNH

XP_022921799.1 uncharacterized protein LOC111429944 [Cucurbita moschata]2.9e-2059.43Show/hide
Query:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF
        MASKS S+N +L  + GGSRKCLCSPT HPGSFRCS HR+RR +SAR+SSSS               K NALR+FL+QI +PS+ DL RR++F P+PSRF
Subjt:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF

Query:  FSMNNH
          MNNH
Subjt:  FSMNNH

XP_022927032.1 uncharacterized protein LOC111433980 [Cucurbita moschata]2.5e-1959.43Show/hide
Query:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF
        MA+KS S NS+L  + G SRKCLCSPT HPGSFRCSFHR+RR  SAR+SSSS               K NA+RAFL  I  PS+ DL RR++FHPRPSRF
Subjt:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF

Query:  FSMNNH
          MN H
Subjt:  FSMNNH

XP_023515429.1 uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo]6.6e-2059.43Show/hide
Query:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF
        MASKS S+N +L  + GGSRKCLCSPT HPGSFRCS HR+RR +SAR+SSSS               K NALR+FL QI +PS+ DL RR++F P+PSRF
Subjt:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF

Query:  FSMNNH
          MNNH
Subjt:  FSMNNH

XP_023530962.1 uncharacterized protein LOC111793349 [Cucurbita pepo subsp. pepo]1.2e-1858.49Show/hide
Query:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF
        MA+KS S NS+L  + G SRKCLCSPT HPGSFRCSFHR+RR  SAR+SSSS               K NA+RAFL  I  PS+ DL RR++FHP PSRF
Subjt:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF

Query:  FSMNNH
          MN H
Subjt:  FSMNNH

TrEMBL top hitse value%identityAlignment
A0A1S3B8Q0 uncharacterized protein LOC1034873961.0e-1861.86Show/hide
Query:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS------KGNALRAFLRQ-IKSPSTDLHRRKDFHPRPSRFFSMNNH
        MASKS S+  +   +  GSRKCLCSPT HPGSFRCSFHR+R  IS+  SSSS      K NALRAFL Q IK  S D+ RR++FHPRPSRF  MN+H
Subjt:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS------KGNALRAFLRQ-IKSPSTDLHRRKDFHPRPSRFFSMNNH

A0A5A7U6S1 Serine-rich protein-related1.0e-1861.86Show/hide
Query:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS------KGNALRAFLRQ-IKSPSTDLHRRKDFHPRPSRFFSMNNH
        MASKS S+  +   +  GSRKCLCSPT HPGSFRCSFHR+R  IS+  SSSS      K NALRAFL Q IK  S D+ RR++FHPRPSRF  MN+H
Subjt:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS------KGNALRAFLRQ-IKSPSTDLHRRKDFHPRPSRFFSMNNH

A0A6J1E1K3 uncharacterized protein LOC1114299441.4e-2059.43Show/hide
Query:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF
        MASKS S+N +L  + GGSRKCLCSPT HPGSFRCS HR+RR +SAR+SSSS               K NALR+FL+QI +PS+ DL RR++F P+PSRF
Subjt:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF

Query:  FSMNNH
          MNNH
Subjt:  FSMNNH

A0A6J1EG01 uncharacterized protein LOC1114339801.2e-1959.43Show/hide
Query:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF
        MA+KS S NS+L  + G SRKCLCSPT HPGSFRCSFHR+RR  SAR+SSSS               K NA+RAFL  I  PS+ DL RR++FHPRPSRF
Subjt:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF

Query:  FSMNNH
          MN H
Subjt:  FSMNNH

A0A6J1KSU0 uncharacterized protein LOC1114972772.3e-1858.49Show/hide
Query:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF
        MA+KS S NS+L  + G SRKCLCSPT HPGSFRCSFHR+RR  SAR+SSSS               K NA+RAFL  I  PS+ DL RR++F PRPSRF
Subjt:  MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSS---------------KGNALRAFLRQIKSPST-DLHRRKDFHPRPSRF

Query:  FSMNNH
          MN H
Subjt:  FSMNNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52342.1 unknown protein8.3e-0545.24Show/hide
Query:  GGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSSKGNAL
        GGG +KC+CSP+ HP SF+C +H+        +SSSS  ++L
Subjt:  GGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSSKGNAL

AT5G11090.1 serine-rich protein-related4.0e-0735.87Show/hide
Query:  SRKCLCSPTNHPGSFRCSFHRSRRNISARASSSSKGNAL-----------------------RAFLRQIKSPSTDLHRRKDFHPRPSRFFSM
        SR+C+CSPT HPGSFRCS H++  N   + ++S   N L                       RA    I+  S  L RR  + PRPSR   M
Subjt:  SRKCLCSPTNHPGSFRCSFHRSRRNISARASSSSKGNAL-----------------------RAFLRQIKSPSTDLHRRKDFHPRPSRFFSM

AT5G20370.1 serine-rich protein-related3.4e-0638.24Show/hide
Query:  RKCLCSPTNHPGSFRCSFHRSRRNISAR--ASSSSKGN------------------ALRAFLRQI-----------------KSPSTDLHRRKDFHPRPS
        RKCLCSPT HPGSFRCSFHR   +  ++  ASS+ K N                  AL   L +I                 K  S   HRR +F PR S
Subjt:  RKCLCSPTNHPGSFRCSFHRSRRNISAR--ASSSSKGN------------------ALRAFLRQI-----------------KSPSTDLHRRKDFHPRPS

Query:  RF
        RF
Subjt:  RF

AT5G25280.1 serine-rich protein-related6.8e-0732.73Show/hide
Query:  SASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSSKGNAL-----------------------RAFLRQIKSPSTDLHRRKDFHPRP
        S++  S  H      R+C+CSPT HPGSFRCS H++  N   + ++S   N L                       RA    I+  S  L RR  + PR 
Subjt:  SASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSSKGNAL-----------------------RAFLRQIKSPSTDLHRRKDFHPRP

Query:  SRFFSMNNHE
        SR  SM+  E
Subjt:  SRFFSMNNHE

AT5G25280.2 serine-rich protein-related6.8e-0732.73Show/hide
Query:  SASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSSKGNAL-----------------------RAFLRQIKSPSTDLHRRKDFHPRP
        S++  S  H      R+C+CSPT HPGSFRCS H++  N   + ++S   N L                       RA    I+  S  L RR  + PR 
Subjt:  SASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSSKGNAL-----------------------RAFLRQIKSPSTDLHRRKDFHPRP

Query:  SRFFSMNNHE
        SR  SM+  E
Subjt:  SRFFSMNNHE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAAAATCTGCATCAACCAATTCGGAATTGCACATCGCCGGCGGCGGTTCACGGAAGTGCCTCTGTTCTCCGACCAACCATCCCGGCTCGTTCCGCTGCAGTTT
CCATCGGAGCCGCCGCAACATCTCCGCCAGAGCATCGTCCTCATCCAAGGGGAATGCGCTCAGGGCGTTTCTTCGCCAGATCAAGTCGCCGAGCACCGATCTTCATCGCC
GGAAGGATTTTCATCCCAGACCTTCCAGGTTTTTCTCGATGAACAATCATGAAATTGTTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAAAATCTGCATCAACCAATTCGGAATTGCACATCGCCGGCGGCGGTTCACGGAAGTGCCTCTGTTCTCCGACCAACCATCCCGGCTCGTTCCGCTGCAGTTT
CCATCGGAGCCGCCGCAACATCTCCGCCAGAGCATCGTCCTCATCCAAGGGGAATGCGCTCAGGGCGTTTCTTCGCCAGATCAAGTCGCCGAGCACCGATCTTCATCGCC
GGAAGGATTTTCATCCCAGACCTTCCAGGTTTTTCTCGATGAACAATCATGAAATTGTTACTTGA
Protein sequenceShow/hide protein sequence
MASKSASTNSELHIAGGGSRKCLCSPTNHPGSFRCSFHRSRRNISARASSSSKGNALRAFLRQIKSPSTDLHRRKDFHPRPSRFFSMNNHEIVT