CuGenDBv2

Gene ID	Sed0026242
Organism	Sechium edule (Chayote v1)
Description	Proteophosphoglycan-like protein
Genome location	LG04:43100619..43103451
RNA-Seq Expression	Sed0026242
Synteny	Sed0026242
Gene Ontology terms	GO:0044237 - cellular metabolic process (biological process)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144518.1 uncharacterized protein LOC101206223 [Cucumis sativus]

1.3e-65

72.05

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Query:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS--SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSSA------DQIR
        MAKTNKYTSINFNHIYDKNLS+N K+ N+ + +KNPSSSSSSS  +ATYSSIS  NKSHGRMLVLTRPTP+PIT    LSP  QSRPSSA      D  R
Subjt:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS--SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSSA------DQIR

Query:  SPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG---
          SDSDSISLRPLGRT +GAIAPS  P  EKD+ I PPV  L KPEKFVPPHLRAGFVGKEERPVNVGIR RE NQR YGNYGS  RYG+DGRPKSG   
Subjt:  SPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG---

Query:  ------GRADL----NRPRSGGNRPSSSG
              G ADL    NRPRS GNRPSSSG
Subjt:  ------GRADL----NRPRSGGNRPSSSG

XP_008455486.1 PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo]

5.3e-67

72.93

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Query:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS--SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSSA------DQIR
        MAKTNKYTSINFNHIYDKNLS+N K+ N+ + +KNPSSSSSSS  +ATYSSIS  NKSHGRMLVLTRPTPKPIT   VLSP  QSRPSSA      DQ R
Subjt:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS--SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSSA------DQIR

Query:  SPSDSDSISLRPLGRTASGAIAPSPTS--EKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG---
          SDSDSISLRPLGRT +GAIAPSP +  EK++ I PPV  L KPEKFVPPHLRAGFVGKEERPVNVGIR RE NQR YGNYGS +RYG+DGRPKSG   
Subjt:  SPSDSDSISLRPLGRTASGAIAPSPTS--EKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG---

Query:  ------GRADL----NRPRSGGNRPSSSG
              G ADL    NRPRS GNRPSSSG
Subjt:  ------GRADL----NRPRSGGNRPSSSG

XP_022952341.1 uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata]

2.9e-65

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Query:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------ADQ
        MAKTNKYTSIN+NHIYDK+LS  P S   NNPSKNPSSSSSSS    SATYSSIS  NKSHGRMLVLTRPTPKPI+   VLSP  QSR  S      ADQ
Subjt:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------ADQ

Query:  IRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSGG
         R   +SDSISLRPLGRT +GAIAPS  P  EKDK IPPP   L KPEKFVPPHLRAGFVGKEERPV+VGIR REANQR YGNYGSP RYG+DGRPKSGG
Subjt:  IRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSGG

Query:  R-------------ADLNRPRSGGNRPSSSG
                      A +NRPRS GNRP+SSG
Subjt:  R-------------ADLNRPRSGGNRPSSSG

XP_022952342.1 uncharacterized protein LOC111455051 isoform X2 [Cucurbita moschata]

2.9e-65

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Query:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------ADQ
        MAKTNKYTSIN+NHIYDK+LS  P S   NNPSKNPSSSSSSS    SATYSSIS  NKSHGRMLVLTRPTPKPI+   VLSP  QSR  S      ADQ
Subjt:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------ADQ

Query:  IRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSGG
         R   +SDSISLRPLGRT +GAIAPS  P  EKDK IPPP   L KPEKFVPPHLRAGFVGKEERPV+VGIR REANQR YGNYGSP RYG+DGRPKSGG
Subjt:  IRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSGG

Query:  R-------------ADLNRPRSGGNRPSSSG
                      A +NRPRS GNRP+SSG
Subjt:  R-------------ADLNRPRSGGNRPSSSG

XP_022969241.1 uncharacterized protein LOC111468300 isoform X1 [Cucurbita maxima]

4.9e-65

71.12

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Query:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS-----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------AD
        MAKTNKYTSIN+NHIYDK+LS  P S   NNPSKNPSSSSSSS     SATYSSIS  NKSHGRMLVLTRPTPKPI+   VLSP  QSR  S      AD
Subjt:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS-----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------AD

Query:  QIRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG
        Q     +SDSISLRPLGRT +GAIAPS  P  EKDK IPPP   L KPEKFVPPHLRAGFVGKEERPVNVGIR REANQR YGNYGSP RYG+DGRPKSG
Subjt:  QIRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG

Query:  ---------GRAD----LNRPRSGGNRPSSSG
                 G AD    +NRPRS GNRP+SSG
Subjt:  ---------GRAD----LNRPRSGGNRPSSSG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K3D7 Uncharacterized protein

6.3e-66

72.05

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Query:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS--SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSSA------DQIR
        MAKTNKYTSINFNHIYDKNLS+N K+ N+ + +KNPSSSSSSS  +ATYSSIS  NKSHGRMLVLTRPTP+PIT    LSP  QSRPSSA      D  R
Subjt:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS--SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSSA------DQIR

Query:  SPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG---
          SDSDSISLRPLGRT +GAIAPS  P  EKD+ I PPV  L KPEKFVPPHLRAGFVGKEERPVNVGIR RE NQR YGNYGS  RYG+DGRPKSG   
Subjt:  SPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG---

Query:  ------GRADL----NRPRSGGNRPSSSG
              G ADL    NRPRS GNRPSSSG
Subjt:  ------GRADL----NRPRSGGNRPSSSG

A0A1S3C160 translation initiation factor IF-2 isoform X1

2.5e-67

72.93

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Query:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS--SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSSA------DQIR
        MAKTNKYTSINFNHIYDKNLS+N K+ N+ + +KNPSSSSSSS  +ATYSSIS  NKSHGRMLVLTRPTPKPIT   VLSP  QSRPSSA      DQ R
Subjt:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS--SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSSA------DQIR

Query:  SPSDSDSISLRPLGRTASGAIAPSPTS--EKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG---
          SDSDSISLRPLGRT +GAIAPSP +  EK++ I PPV  L KPEKFVPPHLRAGFVGKEERPVNVGIR RE NQR YGNYGS +RYG+DGRPKSG   
Subjt:  SPSDSDSISLRPLGRTASGAIAPSPTS--EKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG---

Query:  ------GRADL----NRPRSGGNRPSSSG
              G ADL    NRPRS GNRPSSSG
Subjt:  ------GRADL----NRPRSGGNRPSSSG

A0A6J1GJZ3 uncharacterized protein LOC111455051 isoform X1

1.4e-65

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Query:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------ADQ
        MAKTNKYTSIN+NHIYDK+LS  P S   NNPSKNPSSSSSSS    SATYSSIS  NKSHGRMLVLTRPTPKPI+   VLSP  QSR  S      ADQ
Subjt:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------ADQ

Query:  IRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSGG
         R   +SDSISLRPLGRT +GAIAPS  P  EKDK IPPP   L KPEKFVPPHLRAGFVGKEERPV+VGIR REANQR YGNYGSP RYG+DGRPKSGG
Subjt:  IRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSGG

Query:  R-------------ADLNRPRSGGNRPSSSG
                      A +NRPRS GNRP+SSG
Subjt:  R-------------ADLNRPRSGGNRPSSSG

A0A6J1GK55 uncharacterized protein LOC111455051 isoform X2

1.4e-65

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Query:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------ADQ
        MAKTNKYTSIN+NHIYDK+LS  P S   NNPSKNPSSSSSSS    SATYSSIS  NKSHGRMLVLTRPTPKPI+   VLSP  QSR  S      ADQ
Subjt:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------ADQ

Query:  IRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSGG
         R   +SDSISLRPLGRT +GAIAPS  P  EKDK IPPP   L KPEKFVPPHLRAGFVGKEERPV+VGIR REANQR YGNYGSP RYG+DGRPKSGG
Subjt:  IRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSGG

Query:  R-------------ADLNRPRSGGNRPSSSG
                      A +NRPRS GNRP+SSG
Subjt:  R-------------ADLNRPRSGGNRPSSSG

A0A6J1I0F0 uncharacterized protein LOC111468300 isoform X2

2.4e-65

71.12

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Query:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS-----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------AD
        MAKTNKYTSIN+NHIYDK+LS  P S   NNPSKNPSSSSSSS     SATYSSIS  NKSHGRMLVLTRPTPKPI+   VLSP  QSR  S      AD
Subjt:  MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSS-----SATYSSIS--NKSHGRMLVLTRPTPKPIT---VLSPHLQSRPSS------AD

Query:  QIRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG
        Q     +SDSISLRPLGRT +GAIAPS  P  EKDK IPPP   L KPEKFVPPHLRAGFVGKEERPVNVGIR REANQR YGNYGSP RYG+DGRPKSG
Subjt:  QIRSPSDSDSISLRPLGRTASGAIAPS--PTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSG

Query:  ---------GRAD----LNRPRSGGNRPSSSG
                 G AD    +NRPRS GNRP+SSG
Subjt:  ---------GRAD----LNRPRSGGNRPSSSG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G54680.1 proteophosphoglycan-related

7.4e-27

44.39

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Query:  NKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSSSATYSSISNKSHGRMLVLTRPTPKPI---------TVLSPHLQSRPS-SADQIRSPSDSDS
        NKYTSINFNHI             H +P   PSSSSSSSSA+YSS++ +S+GRMLVLT+ +PKP+         T  +P + + P   ++Q  S  D   
Subjt:  NKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSSSATYSSISNKSHGRMLVLTRPTPKPI---------TVLSPHLQSRPS-SADQIRSPSDSDS

Query:  ISLRPLGRTASGAIAPSP--TSEKDK----GIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNR---------YGDDGRP
        ISLRPLG T S +    P  T E +K      P PV+  PKP++FVPPHLR GFV K+E+P     R+R+ N  L  N   PN+         YG  GRP
Subjt:  ISLRPLGRTASGAIAPSP--TSEKDK----GIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNR---------YGDDGRP

Query:  KSGGRADLNR-PRSGGNRPSSSG
        KSGG   +   PR  GNRP +SG
Subjt:  KSGGRADLNR-PRSGGNRPSSSG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCAACAATCCCAAATCTGTCAACCACAACAATCCCTCTAAAAACCCTTC
TTCTTCTTCTTCTTCATCCTCTGCAACTTATTCCTCCATATCTAACAAGTCCCATGGCCGCATGCTCGTCCTGACCCGCCCTACCCCCAAACCCATCACCGTCCTTTCCC
CTCACCTCCAATCTCGCCCCTCCTCCGCCGATCAGATCCGCTCTCCATCCGATTCCGATTCGATCTCTCTTCGCCCTCTCGGCCGGACCGCTTCCGGCGCCATCGCTCCG
TCTCCGACCTCGGAGAAGGACAAGGGGATTCCTCCTCCGGTGGCGGCGTTGCCTAAACCGGAGAAATTTGTGCCGCCGCATCTTAGGGCGGGTTTCGTTGGGAAAGAGGA
GAGGCCTGTGAACGTTGGGATCCGACTTAGAGAGGCGAATCAGAGGCTGTATGGGAATTATGGGTCTCCGAATCGGTACGGCGATGATGGCCGGCCGAAATCCGGCGGCA
GGGCAGATCTGAATCGGCCGAGATCCGGTGGAAATCGCCCGAGTTCCAGTGGATGA

mRNA sequence

Show/hide mRNA sequence

TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCCTTCCTTTGGATCCTCACAAAGTTGTTGTTGATTCCCCTGTTTCTGAACAATCCCCCAAATC
CCATAAAGAAGCTTGAAAGAACAGAGCAGTGGATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCAACAATCCCAAATCT
GTCAACCACAACAATCCCTCTAAAAACCCTTCTTCTTCTTCTTCTTCATCCTCTGCAACTTATTCCTCCATATCTAACAAGTCCCATGGCCGCATGCTCGTCCTGACCCG
CCCTACCCCCAAACCCATCACCGTCCTTTCCCCTCACCTCCAATCTCGCCCCTCCTCCGCCGATCAGATCCGCTCTCCATCCGATTCCGATTCGATCTCTCTTCGCCCTC
TCGGCCGGACCGCTTCCGGCGCCATCGCTCCGTCTCCGACCTCGGAGAAGGACAAGGGGATTCCTCCTCCGGTGGCGGCGTTGCCTAAACCGGAGAAATTTGTGCCGCCG
CATCTTAGGGCGGGTTTCGTTGGGAAAGAGGAGAGGCCTGTGAACGTTGGGATCCGACTTAGAGAGGCGAATCAGAGGCTGTATGGGAATTATGGGTCTCCGAATCGGTA
CGGCGATGATGGCCGGCCGAAATCCGGCGGCAGGGCAGATCTGAATCGGCCGAGATCCGGTGGAAATCGCCCGAGTTCCAGTGGATGATTTGGGAGTTCAAGAATGTGTA
GCATAGATGCCTGTGTTTGAGAAATGCAAGATGCTTGAGTTAGAGTCTTAGACCATGTATGGGACGGATGAAGAGGTCAAGAGTTCGAATTCGACATTCTATATTGGGCA
TCCCCAATTGATTGTTGTTGAACTGACAAAAGACTGTATATTGGACATTCTATTCTGATCGTGGGCTCAACATTTTCATAGTGGGAATTTACAGATTTTAAAGAGATGAT
ATGATGAACAATGAACTACATATCTCCAATCGGTCCAACCTTCATAAATAGATGCTCTTGAAAGAATTTTATGACTTACGAGCTTACTTGAACGCGATCTATTCTATAAG
TTGTACATCTTTGTCATTTTATGATTTTCTGTCTACAGCCTATGATAAGAAATTAGTCATCTAGCCATGTAATTGAGTTCCTATAGAAAGTGTGTTAAATAATAGTTGAT
GTGTAGGCCATTGAAATTTTACCTATGTATTTAGGCCAACTTTTTTCCCTTCAAAATGGTAGATTAGATAATTATCCCCAAAACAAACACACACATGCACACAAGACACA
ACTCCTCTATCCGGTTTTTAGGAATTGACAAATATATTGATCTTCCTTTTACTTGTTTTTGTTCATATGATAAAATTCCTTTGACATGTGTTTGTATTCTTCACTGGTTT
TTATGGTTGACACAAATTATGCTTTAAACAGATTCATTATGAAGTTGGATACTTTTCCAAGGATGAAGATGGATTACATTTGAAGCACAAGAAATGCTGATCAGCACCCA
TCTTGTATCCTTCTCGAATCCGCATTCGTCGTCAAAAGTTTTTATTTTTTTAGAATCCTTAGTCATAGAAGATAAACAGATACTAAAGGTAACAGATCTCAACAATGAAG
TAACATACTTCTAATTTAGATTGCCATACCTACCCCCATAAAAAAAGATGAGTTTCAGCATCCAATCCCTTTATTGATTGGTAGTTTGCTTGCCTTCATCCTCTTCTGCA
TTTATGGAAGGTACAGAAGGTTCGTTTCGCGAATGTAGATCCGACCCATGTTATGCGTTGTTGTCGTTATTAACTTCTTTTAGATGCTATTTCAGTTTGTAAAATAAGGA
CTTGTTTTGTGTGAGGATATTAGATTTCTTTCAGTTTGTAATGGTTTATCATTGTTGAAATATTTCTGGGGAAGGTGAATGAAATTGCCATATTCTAATGCCA

Protein sequence

Show/hide protein sequence

MAKTNKYTSINFNHIYDKNLSNNPKSVNHNNPSKNPSSSSSSSSATYSSISNKSHGRMLVLTRPTPKPITVLSPHLQSRPSSADQIRSPSDSDSISLRPLGRTASGAIAP
SPTSEKDKGIPPPVAALPKPEKFVPPHLRAGFVGKEERPVNVGIRLREANQRLYGNYGSPNRYGDDGRPKSGGRADLNRPRSGGNRPSSSG

Sed0026242 (gene) of Chayote v1 genome