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Sed0026250 (gene) of Chayote v1 genome

Gene IDSed0026250
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:22405929..22406300
RNA-Seq ExpressionSed0026250
SyntenySed0026250
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646857.1 hypothetical protein Csa_020829, partial [Cucumis sativus]3.2e-2260.16Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIA
        MNQ  ++  EISEAR  EAQ G I RLTQV+N L+DRL+R+EVAL N  QG+  N   EGVENE+ EDN  LLA  N RG RVLG+G R  RR GR+++ 
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIA

Query:  PRRVERENQ----YERGVGGVKLKILTF
         RRVERE Q     ERG+GGVKLKI TF
Subjt:  PRRVERENQ----YERGVGGVKLKILTF

XP_022925325.1 uncharacterized protein LOC111432615 [Cucurbita moschata]2.1e-1864.52Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRG-GRGGRR
        MNQD  +G EI+EARWREAQ G I RL QV+++L+DR+ER+++ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR +GRG GR  RR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRG-GRGGRR

XP_022929948.1 uncharacterized protein LOC111436410 [Cucurbita moschata]1.0e-1766.67Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGR
        MNQDG +G EI+EARWREAQ G I  L QV+++L+DR+ER+E+ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGR

XP_023534142.1 uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo]2.2e-3166.14Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP
        MNQDG +G EI+EARWREAQ G I RL QV+++L+DR+ER+E+ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR +GRG    RR GREI+AP
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP

Query:  RRVERENQYER----GVGGVKLKILTF
        +R+ERE QYER    GV GVKLKI TF
Subjt:  RRVERENQYER----GVGGVKLKILTF

XP_038888883.1 uncharacterized protein LOC120078660 [Benincasa hispida]7.8e-2159.06Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP
        M+Q   D  E SEAR+REAQ GVI RLT+VV SL DR+ERMEVAL NPQ  E   N E  +NE+ +DN  LL G N RG  VLGRG   GRR  R I+ P
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP

Query:  RRVERENQYER----GVGGVKLKILTF
        R VERE Q ER    G+GGVKL I TF
Subjt:  RRVERENQYER----GVGGVKLKILTF

TrEMBL top hitse value%identityAlignment
A0A0A0KC00 Uncharacterized protein1.3e-1656.25Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIA
        MN+  ++  +ISEA+  EAQ G I RLTQV+N L++RL+RMEVAL N  QG   N   EGVENE+ EDN   LAG NPRG RVLG+G R  RR  R ++ 
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIA

Query:  PRRVERENQYER
         RRVE E+Q ER
Subjt:  PRRVERENQYER

A0A0A0L0S3 Uncharacterized protein1.1e-0959.04Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRV
        MNQ  ++  EISEAR  EAQ G I RLTQV+N L+DRL+RM VAL N  QG   N   EGVENE  EDN  LLA  NP   RV
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRV

A0A5A7UDQ9 Uncharacterized protein6.2e-0853.41Show/hide
Query:  MEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAPRRVERENQYER----GVGGVKLKILTF
        M+VAL N  QG   N   EGVEN++ EDN  +L G NP+G RVLG+  R  RR G  ++  RRVERE + ER    G+GGVKL ILTF
Subjt:  MEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAPRRVERENQYER----GVGGVKLKILTF

A0A6J1EHL9 uncharacterized protein LOC1114326151.0e-1864.52Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRG-GRGGRR
        MNQD  +G EI+EARWREAQ G I RL QV+++L+DR+ER+++ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR +GRG GR  RR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRG-GRGGRR

A0A6J1ETN1 uncharacterized protein LOC1114364105.1e-1866.67Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGR
        MNQDG +G EI+EARWREAQ G I  L QV+++L+DR+ER+E+ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAAGATGGGAGAGATGGAGAGGAGATTAGTGAAGCTAGGTGGAGAGAAGCTCAAAGTGGGGTCATTAATCGTTTAACTCAAGTTGTTAATTCCTTAAGCGATAG
GTTGGAGCGAATGGAAGTAGCTTTAGGAAATCCTCAAGGGAGGGAGGATAACTTTAATTATGAAGGAGTTGAAAATGAAGATGGAGAAGATAATGTTAACCTCTTAGCGG
GATACAATCCACGGGGAGGGAGAGTTTTAGGTCGAGGGGGACGAGGAGGAAGAAGAGGGGGTAGGGAAATTATAGCACCTAGAAGGGTCGAAAGGGAGAACCAATATGAA
AGAGGAGTAGGGGGAGTAAAGCTTAAAATTCTTACTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAAGATGGGAGAGATGGAGAGGAGATTAGTGAAGCTAGGTGGAGAGAAGCTCAAAGTGGGGTCATTAATCGTTTAACTCAAGTTGTTAATTCCTTAAGCGATAG
GTTGGAGCGAATGGAAGTAGCTTTAGGAAATCCTCAAGGGAGGGAGGATAACTTTAATTATGAAGGAGTTGAAAATGAAGATGGAGAAGATAATGTTAACCTCTTAGCGG
GATACAATCCACGGGGAGGGAGAGTTTTAGGTCGAGGGGGACGAGGAGGAAGAAGAGGGGGTAGGGAAATTATAGCACCTAGAAGGGTCGAAAGGGAGAACCAATATGAA
AGAGGAGTAGGGGGAGTAAAGCTTAAAATTCTTACTTTCTGA
Protein sequenceShow/hide protein sequence
MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAPRRVERENQYE
RGVGGVKLKILTF