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Sed0026251 (gene) of Chayote v1 genome

Gene IDSed0026251
OrganismSechium edule (Chayote v1)
DescriptionAnkyrin repeat-containing protein
Genome locationLG08:36990978..36994388
RNA-Seq ExpressionSed0026251
SyntenySed0026251
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99314.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa]5.8e-1456.25Show/hide
Query:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY
        K+ +NMLHLA KLAAP+HL RVSGAA+Q QRE +WFK V+K+V PS+  A+     L++LTP  LFTREH+  ++  EE+
Subjt:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY

XP_008440571.1 PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis melo]5.8e-1456.25Show/hide
Query:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY
        K+ +NMLHLA KLAAP+HL RVSGAA+Q QRE +WFK V+K+V PS+  A+     L++LTP  LFTREH+  ++  EE+
Subjt:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY

XP_008440580.1 PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X2 [Cucumis melo]5.8e-1456.25Show/hide
Query:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY
        K+ +NMLHLA KLAAP+HL RVSGAA+Q QRE +WFK V+K+V PS+  A+     L++LTP  LFTREH+  ++  EE+
Subjt:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY

XP_011660364.1 ankyrin repeat-containing protein At5g02620 [Cucumis sativus]2.0e-1449.41Show/hide
Query:  YSIATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAELSE-LTPRSLFTREHEQRQRAHEEY
        + IA Y+D+ + +N+LHLA KLA+ +HL RV+GAA+Q QRE +WFK V+K+  P  H+   ++ LTPR +FT+EH Q Q+  EE+
Subjt:  YSIATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAELSE-LTPRSLFTREHEQRQRAHEEY

XP_022137095.1 ankyrin repeat-containing protein ITN1-like [Momordica charantia]9.9e-1451.69Show/hide
Query:  RGYSIATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAELSE---LTPRSLFTREHEQRQRAHEEY
        R +S       K+N+NMLHLA KLAA +HL RVSGAA+Q QRE +WFK V+K+V PS+ DA+  +   LTP  LF+ EH+  +R  EE+
Subjt:  RGYSIATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAELSE---LTPRSLFTREHEQRQRAHEEY

TrEMBL top hitse value%identityAlignment
A0A1S3B1H2 ankyrin repeat-containing protein At5g02620-like isoform X22.8e-1456.25Show/hide
Query:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY
        K+ +NMLHLA KLAAP+HL RVSGAA+Q QRE +WFK V+K+V PS+  A+     L++LTP  LFTREH+  ++  EE+
Subjt:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY

A0A1S3B217 ankyrin repeat-containing protein At5g02620-like isoform X12.8e-1456.25Show/hide
Query:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY
        K+ +NMLHLA KLAAP+HL RVSGAA+Q QRE +WFK V+K+V PS+  A+     L++LTP  LFTREH+  ++  EE+
Subjt:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY

A0A5D3BJX5 Ankyrin repeat-containing protein2.8e-1456.25Show/hide
Query:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY
        K+ +NMLHLA KLAAP+HL RVSGAA+Q QRE +WFK V+K+V PS+  A+     L++LTP  LFTREH+  ++  EE+
Subjt:  KDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE-----LSELTPRSLFTREHEQRQRAHEEY

A0A6J1C5Q4 ankyrin repeat-containing protein ITN1-like4.8e-1451.69Show/hide
Query:  RGYSIATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAELSE---LTPRSLFTREHEQRQRAHEEY
        R +S       K+N+NMLHLA KLAA +HL RVSGAA+Q QRE +WFK V+K+V PS+ DA+  +   LTP  LF+ EH+  +R  EE+
Subjt:  RGYSIATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAELSE---LTPRSLFTREHEQRQRAHEEY

A0A6J1C6Z9 uncharacterized protein LOC111008827 isoform X14.8e-1449.48Show/hide
Query:  IATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAELS---------------ELTPRSLFTREHEQRQRAHEEY
        IA YY++K+N NMLHL   LAAP HL RVSGAA+Q QRE +WFK V+K+V  S H    S                LTPR LFT+EH+Q  +  EE+
Subjt:  IATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAELS---------------ELTPRSLFTREHEQRQRAHEEY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18670.1 Ankyrin repeat family protein8.6e-0840.48Show/hide
Query:  IATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE--LSELTPRSLFTREHEQRQRAHEEY
        +AT +D   N NMLH A   A  S L  + GAA+Q QRE  WFK V+KLV+P          + TP++LFT +H+      E++
Subjt:  IATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAE--LSELTPRSLFTREHEQRQRAHEEY

AT3G54070.1 Ankyrin repeat family protein2.3e-0534.52Show/hide
Query:  IATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPS--EHDAELSELTPRSLFTREHEQRQRAHEEY
        IA+Y +K+    +LHL  +L   +  +  SGAA+  Q+E +WFKAV ++V  S  E      EL    +FT +HE  ++  E +
Subjt:  IATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPS--EHDAELSELTPRSLFTREHEQRQRAHEEY

AT5G04700.1 Ankyrin repeat family protein1.6e-0637.33Show/hide
Query:  DNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHD-AELSELTPRSLFTREHEQRQRAHEEY
        D   +LHLA   + PS L  V GA +Q QRE  WFK V+++    E +     E TP  +FT+EH+  ++  E++
Subjt:  DNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHD-AELSELTPRSLFTREHEQRQRAHEEY

AT5G04730.1 Ankyrin-repeat containing protein1.9e-1036.46Show/hide
Query:  NRGYSIATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSE-HDAELSELTPRSLFTREHEQRQRAHEEYQLFYLWDC
        +R  ++   YDK +N N+LH+A +L+ P  L ++SGAA++ QRE  WFK V+ LV   E         TPR +F   HE  ++  EE+  +    C
Subjt:  NRGYSIATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSE-HDAELSELTPRSLFTREHEQRQRAHEEYQLFYLWDC

AT5G35810.1 Ankyrin repeat family protein7.1e-1037.5Show/hide
Query:  IATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEH--DAELSELTPRSLFTREHEQRQRAHEEYQLFYLWDCVCSS
        IA Y +K+ N N+LHL  +L  P+ L+ VSGAA+Q QRE +W+KAV ++V P  +       E     LFT+EH+  ++  E++       C+  S
Subjt:  IATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEH--DAELSELTPRSLFTREHEQRQRAHEEYQLFYLWDCVCSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAATAGAGGATATAGCATAGCCACTTATTACGACAAAAAAGACAACTTCAACATGCTCCATCTGGCTTACAAATTAGCTGCTCCATCTCACCTGAAGAGAGTTTC
AGGAGCTGCTGTTCAGTTCCAAAGAGAGCCTATGTGGTTCAAGGCAGTGGACAAACTTGTGGAACCTAGCGAACACGATGCGGAACTTTCTGAGCTAACACCTCGAAGCC
TGTTCACCAGAGAGCACGAACAAAGGCAGAGAGCACATGAAGAATACCAGCTATTTTATTTGTGGGATTGTGTATGCTCTTCCTTTCAGGGCTATTCATGGTGGCGGCCT
TCTACATGGAATATTATGAAGGCTCAGATTCTGCTGGTTGCTGGGTCAGTGTCTATTGTTTTTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATAATGGAAAATTTTGAAGATGTGGCACAGTTGTAAATAAAAAAGCTTGGAGCCAAGCCGCCATTTTCTTCTCACTCCTATCTGCTCCACGACGAAAAACGCCAGTTTCC
TCGCCGCCGATCAAGCATCGTTCACCTTCGGCCATTCTCTTCCCGGTTTCCGGCGACCACAGAACTGCTGTGGATCTCTTCTGCTAATTCTTCTTCTCTGCACCGATCAG
ACTCCAAAGACACATCCGATTTTATAATTTGGACATGAAAAAGCAGCAAGAAGATATGGAAGAATTGGTGAATACTAGTTGTGAATCAAAGACTCCTACAGCAGACAAGA
AGCTTCTTGCTACTGATGAGCCAAGATCTTTGAACCATAAAGACCTTGATCACAGCAATAATGTTGCAGGTGCAAATTAATGTAATTGTTGATGCAAGAGACGAGACCAA
CATTTCAATTTGCAATTGCAACAGTGTTGTAAAAAGTGCCGTAGTAATTCCTGTTTCAGCTGCATTAGCTTATGCCCACAAAGAAATGGCTTCATTTCTCTCCTCTAAGA
CTGATTTTGAAGCTTTTGATACTTCTACACAGTTTGGGCTTTTTATTGCTTGCATCTTTCATGACTTTTATGATAAACGTTGAATATTTTGAAAAAGAAACCAGAATTAG
CATTGAAGCGTATAGAGGAAAACGTAGACACAGCTTTGCATATGCTGGCCAGAAAACCATATGGAATAATTGGTAGCAGGAGTGAATATGCTTTAAAGGAATCTGCAACA
AAGCTTTGATGCAGACATTAGCCCATCAAGTGGTTGAGCATGTGTGGCAAATTATTATAATGAACTTTACCATAGCTGAGTTTTTGAAGTGGATGGCGACTCCCTCAAGA
GTACTACACGATGCTGCAAGAGTTGGAAACGTCGAGTTTATAATCATACTCATATCCTCCTCTGCTGAAAGAGGTTGATGATGATAACAAGAATATATTTCATGTAGCAG
TTGAAAATCGACCAGAAAACGTCTTCACTTTAATGCTTAATAGAGGATATAGCATAGCCACTTATTACGACAAAAAAGACAACTTCAACATGCTCCATCTGGCTTACAAA
TTAGCTGCTCCATCTCACCTGAAGAGAGTTTCAGGAGCTGCTGTTCAGTTCCAAAGAGAGCCTATGTGGTTCAAGGCAGTGGACAAACTTGTGGAACCTAGCGAACACGA
TGCGGAACTTTCTGAGCTAACACCTCGAAGCCTGTTCACCAGAGAGCACGAACAAAGGCAGAGAGCACATGAAGAATACCAGCTATTTTATTTGTGGGATTGTGTATGCT
CTTCCTTTCAGGGCTATTCATGGTGGCGGCCTTCTACATGGAATATTATGAAGGCTCAGATTCTGCTGGTTGCTGGGTCAGTGTCTATTGTTTTTGTCTAATTTTGTGCG
AGTTACTTTCAATTACTGGCTAATATACTGCACTCTTTCGTTTTGTTTGAGTTTTATGAAGCACTGCTGAAGTGTTAGTAAATAATCTATTGTTT
Protein sequenceShow/hide protein sequence
MLNRGYSIATYYDKKDNFNMLHLAYKLAAPSHLKRVSGAAVQFQREPMWFKAVDKLVEPSEHDAELSELTPRSLFTREHEQRQRAHEEYQLFYLWDCVCSSFQGYSWWRP
STWNIMKAQILLVAGSVSIVFV