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Sed0026258 (gene) of Chayote v1 genome

Gene IDSed0026258
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:32079200..32079978
RNA-Seq ExpressionSed0026258
SyntenySed0026258
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY05110.1 Uncharacterized protein TCM_020200 [Theobroma cacao]3.5e-0538.83Show/hide
Query:  MAKPFSTCKNRTTFQTSLFSDSEIDVAIQLVHLSEDSD------LAASSAGIEDGGCKNSLRRASTTLIEDIFDEIGGIANRRRKKRRSRSVYEIYKLTK
        MAKP S C+   T+    FS+SEIDVA QL+ L  D+D      L      ++D G      +AS  ++EDIF++     +  R+KR+SRS++ IY  TK
Subjt:  MAKPFSTCKNRTTFQTSLFSDSEIDVAIQLVHLSEDSD------LAASSAGIEDGGCKNSLRRASTTLIEDIFDEIGGIANRRRKKRRSRSVYEIYKLTK

Query:  PVI
        P++
Subjt:  PVI

KAG6571728.1 hypothetical protein SDJN03_28456, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2357.48Show/hide
Query:  MAKPFSTCKNRTTFQTSLFSDSEIDVAIQLVHLSEDSDL----------------------AASSAGIEDGGCKNSLRRA-----STTLIEDIFDEIGGI
        MAK  S+CKNR  F+TS+FSDSEIDVAIQL+HLSEDSD                       A ++AG+ED G  +S RR      +T+LIEDIF+EIG  
Subjt:  MAKPFSTCKNRTTFQTSLFSDSEIDVAIQLVHLSEDSDL----------------------AASSAGIEDGGCKNSLRRA-----STTLIEDIFDEIGGI

Query:  ANRRRKKRRSRSVYEIYKLTKPVISVK
        +NRRR+KRRSRSVYEIYKLTKP ISVK
Subjt:  ANRRRKKRRSRSVYEIYKLTKPVISVK

KAG6588821.1 hypothetical protein SDJN03_17386, partial [Cucurbita argyrosperma subsp. sororia]9.2e-2259.5Show/hide
Query:  MAKPFSTCKNRTTFQTSLFSDSEIDVAIQLVHLSEDSD----LAASSAG-----------------IEDGGCKNSLRRASTTLIEDIFDEIGGIANRRRK
        MA+  ST +NR  FQTS+FSDSEIDVAIQL+HLSEDSD    L ASS                   +ED G  N  R   TT IEDI++EIG  ANRRR+
Subjt:  MAKPFSTCKNRTTFQTSLFSDSEIDVAIQLVHLSEDSD----LAASSAG-----------------IEDGGCKNSLRRASTTLIEDIFDEIGGIANRRRK

Query:  KRRSRSVYEIYKLTKPVISVK
        KRRSRSVYEIYKLTKPVI VK
Subjt:  KRRSRSVYEIYKLTKPVISVK

TrEMBL top hitse value%identityAlignment
A0A061EJB7 Uncharacterized protein1.7e-0538.83Show/hide
Query:  MAKPFSTCKNRTTFQTSLFSDSEIDVAIQLVHLSEDSD------LAASSAGIEDGGCKNSLRRASTTLIEDIFDEIGGIANRRRKKRRSRSVYEIYKLTK
        MAKP S C+   T+    FS+SEIDVA QL+ L  D+D      L      ++D G      +AS  ++EDIF++     +  R+KR+SRS++ IY  TK
Subjt:  MAKPFSTCKNRTTFQTSLFSDSEIDVAIQLVHLSEDSD------LAASSAGIEDGGCKNSLRRASTTLIEDIFDEIGGIANRRRKKRRSRSVYEIYKLTK

Query:  PVI
        P++
Subjt:  PVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCGTTTGCGTCTATTTACTTACCCCCTCGTTTCGCTTTCAACGGACATGCGCTCAGTCTCTCCAATGGCGAAACCATTTTCCACCTGCAAGAATCGAACAACGTT
CCAGACCTCTCTCTTCTCCGATTCCGAAATCGACGTCGCAATTCAGCTTGTTCATCTCAGCGAGGATTCCGACCTCGCCGCCTCCTCCGCCGGAATCGAAGACGGAGGAT
GCAAAAACAGCCTCCGCAGAGCCTCAACCACTCTGATCGAAGACATCTTCGACGAAATCGGAGGAATCGCGAATCGGAGGCGGAAGAAGCGCCGATCGCGTTCTGTTTAT
GAGATTTACAAATTGACGAAGCCTGTGATCTCCGTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCGTTTGCGTCTATTTACTTACCCCCTCGTTTCGCTTTCAACGGACATGCGCTCAGTCTCTCCAATGGCGAAACCATTTTCCACCTGCAAGAATCGAACAACGTT
CCAGACCTCTCTCTTCTCCGATTCCGAAATCGACGTCGCAATTCAGCTTGTTCATCTCAGCGAGGATTCCGACCTCGCCGCCTCCTCCGCCGGAATCGAAGACGGAGGAT
GCAAAAACAGCCTCCGCAGAGCCTCAACCACTCTGATCGAAGACATCTTCGACGAAATCGGAGGAATCGCGAATCGGAGGCGGAAGAAGCGCCGATCGCGTTCTGTTTAT
GAGATTTACAAATTGACGAAGCCTGTGATCTCCGTGAAGTAACTGGCGGAGGAATCTCGAATATGTACAGTCTCTTTAACTTTTTCGTCTCAGCGAAGATTTAGATTACC
ACGACGATCTCACCGCCTCCTCTACCGGTTGCAGCAACCACAAATCCGTCTCCTCCGCTGCGAACGCAGCCGGAATGAGAGATTCAGGAAGCTACAACAGCCTCCGCAGA
GCAGCAACCACTCCGATCGAAGACATCGGAGGAATCGCAAATCGGAGGCGGAAGAAGCAGCGATCGCGTTCGTTTTACGAGATTTACAAATTGATGAAGGCTGTAATCTC
TGTGAAGTAACTGGAAAAGGAATCTCGAAGCGGAAATCGAAATCTGTACGCTCTCTTAACTTTTTGTGTTCGTTAATTTTCCTGAATCGAAACCTAACTGCGTGTTTCTC
TGTTTGTGC
Protein sequenceShow/hide protein sequence
MLRLRLFTYPLVSLSTDMRSVSPMAKPFSTCKNRTTFQTSLFSDSEIDVAIQLVHLSEDSDLAASSAGIEDGGCKNSLRRASTTLIEDIFDEIGGIANRRRKKRRSRSVY
EIYKLTKPVISVK