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Sed0026293 (gene) of Chayote v1 genome

Gene IDSed0026293
OrganismSechium edule (Chayote v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationLG06:3668146..3671128
RNA-Seq ExpressionSed0026293
SyntenySed0026293
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145697.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]3.7e-3574.77Show/hide
Query:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE
        MSY YGY+HPPP  YPPPG PPPQP +PG  P P     PPP Q YQ YFYDG++P APPP PPP PP HHQHYHYDDR++CSSFLHGCLATLCCCC+LE
Subjt:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE

Query:  ECLACFR
        ECLACFR
Subjt:  ECLACFR

XP_008450006.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]1.2e-3878.5Show/hide
Query:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE
        MSYSYGY+HPPP  YPPPG PPPQP +PG+ PPP     PPP Q YQ YFYDG++P APPP PPP PPYHHQHYHYDDR++CSSFLHGCLATLCCCCMLE
Subjt:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE

Query:  ECLACFR
        ECLACFR
Subjt:  ECLACFR

XP_022928579.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]7.4e-3674.55Show/hide
Query:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRP--PAPPPLP-PPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCC
        MSY Y +HH PP  YPPPG PPPQP +PGNP        PPP Q YQDYFYDG++P  P PPP P PP PPYHHQHYHYDDRDECSSFL GCLATLCCCC
Subjt:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRP--PAPPPLP-PPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCC

Query:  MLEECLACFR
        MLEECLACFR
Subjt:  MLEECLACFR

XP_022989747.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]1.4e-3472.73Show/hide
Query:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRP--PAPPPLP-PPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCC
        MSY Y +HH PP  YPPPG PPPQP +PGNP        PPP Q YQ+YFYDG++P  P PPP P PP PPYHHQHY+YDDRDECSSFL GCLATLCCCC
Subjt:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRP--PAPPPLP-PPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCC

Query:  MLEECLACFR
        MLEECLACFR
Subjt:  MLEECLACFR

XP_038879833.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Benincasa hispida]3.0e-3776.64Show/hide
Query:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE
        MSY YGYH PPP  YPPPG PPPQP +PG+ PPP     PPP Q YQ YFYDG++P APP  PPP PPYHHQHYHYDDR++CSSFLHGCLATLCCCCMLE
Subjt:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE

Query:  ECLACFR
        ECLACFR
Subjt:  ECLACFR

TrEMBL top hitse value%identityAlignment
A0A0A0L8F9 Uncharacterized protein1.8e-3574.77Show/hide
Query:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE
        MSY YGY+HPPP  YPPPG PPPQP +PG  P P     PPP Q YQ YFYDG++P APPP PPP PP HHQHYHYDDR++CSSFLHGCLATLCCCC+LE
Subjt:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE

Query:  ECLACFR
        ECLACFR
Subjt:  ECLACFR

A0A1S3BP97 cysteine-rich and transmembrane domain-containing protein A-like5.9e-3978.5Show/hide
Query:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE
        MSYSYGY+HPPP  YPPPG PPPQP +PG+ PPP     PPP Q YQ YFYDG++P APPP PPP PPYHHQHYHYDDR++CSSFLHGCLATLCCCCMLE
Subjt:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE

Query:  ECLACFR
        ECLACFR
Subjt:  ECLACFR

A0A6J1EL88 cysteine-rich and transmembrane domain-containing protein WIH2-like3.6e-3674.55Show/hide
Query:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRP--PAPPPLP-PPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCC
        MSY Y +HH PP  YPPPG PPPQP +PGNP        PPP Q YQDYFYDG++P  P PPP P PP PPYHHQHYHYDDRDECSSFL GCLATLCCCC
Subjt:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRP--PAPPPLP-PPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCC

Query:  MLEECLACFR
        MLEECLACFR
Subjt:  MLEECLACFR

A0A6J1J313 cysteine-rich and transmembrane domain-containing protein WIH2-like7.5e-3471.82Show/hide
Query:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLP---PPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCC
        M+Y YGY HPPP  YPPPG  PPQP +PG+ P P     PPP Q YQ YFYDG+ P APPP P   PP PPY HQHYHYDDR++CSSFLHGCLATLCCCC
Subjt:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLP---PPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCC

Query:  MLEECLACFR
        MLEECLACFR
Subjt:  MLEECLACFR

A0A6J1JGP0 cysteine-rich and transmembrane domain-containing protein WIH2-like6.8e-3572.73Show/hide
Query:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRP--PAPPPLP-PPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCC
        MSY Y +HH PP  YPPPG PPPQP +PGNP        PPP Q YQ+YFYDG++P  P PPP P PP PPYHHQHY+YDDRDECSSFL GCLATLCCCC
Subjt:  MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRP--PAPPPLP-PPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCC

Query:  MLEECLACFR
        MLEECLACFR
Subjt:  MLEECLACFR

SwissProt top hitse value%identityAlignment
Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH28.3e-0643.14Show/hide
Query:  YHHPPPAIYPPPGCPP---PQPAFPGNP-PPPGFPGDPPPPQVY--QDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE
        Y+ PP  + PP G PP   P+ A+P    PP G+P    PPQ Y  Q Y   G+ PP  P  PP  PP H Q      +     FL GCLA LCCCC+L+
Subjt:  YHHPPPAIYPPPGCPP---PQPAFPGNP-PPPGFPGDPPPPQVY--QDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE

Query:  EC
         C
Subjt:  EC

Arabidopsis top hitse value%identityAlignment
AT1G12810.1 proline-rich family protein3.8e-1444.96Show/hide
Query:  YHHPPPAIYPPPGCPP--PQPAFPGNPPPPGFPGDP------PPPQV---------------YQDYFYDGFRP-----PAPPPLPPPVPPYHHQHYHYDD
        Y   PP  YPPPG     P P +P  PPPPG+P  P      PPPQ                YQ YF  G  P     P PPP P      HH H+HY D
Subjt:  YHHPPPAIYPPPGCPP--PQPAFPGNPPPPGFPGDP------PPPQV---------------YQDYFYDGFRP-----PAPPPLPPPVPPYHHQHYHYDD

Query:  RDE-CSSFLHGCLATLCCCCMLEECLACF
         D  C SF+ GCLA LCCCC+LEEC  CF
Subjt:  RDE-CSSFLHGCLATLCCCCMLEECLACF

AT1G12810.2 proline-rich family protein4.8e-0935.8Show/hide
Query:  YHHPPPAIYPPPGCPP--PQPAFPGNPPPPGFPGDP------PPPQV---------------YQDYFYDGFRP-----PAPPPLPPPVPPYHHQHYHYDD
        Y   PP  YPPPG     P P +P  PPPPG+P  P      PPPQ                YQ YF  G  P     P PPP P      HH H+HY D
Subjt:  YHHPPPAIYPPPGCPP--PQPAFPGNPPPPGFPGDP------PPPQV---------------YQDYFYDGFRP-----PAPPPLPPPVPPYHHQHYHYDD

Query:  RDE-CSSFLHGC---------------------------------LATLCCCCMLEECLACF
         D  C SF+ GC                                 LA LCCCC+LEEC  CF
Subjt:  RDE-CSSFLHGC---------------------------------LATLCCCCMLEECLACF

AT2G41420.1 proline-rich family protein5.9e-0743.14Show/hide
Query:  YHHPPPAIYPPPGCPP---PQPAFPGNP-PPPGFPGDPPPPQVY--QDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE
        Y+ PP  + PP G PP   P+ A+P    PP G+P    PPQ Y  Q Y   G+ PP  P  PP  PP H Q      +     FL GCLA LCCCC+L+
Subjt:  YHHPPPAIYPPPGCPP---PQPAFPGNP-PPPGFPGDPPPPQVY--QDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLE

Query:  EC
         C
Subjt:  EC

AT3G49845.1 unknown protein3.2e-0541.51Show/hide
Query:  HPPPAIYPPPGCPPPQPAFPGNPPPPGFP--GDPPPPQVY-QDYFYDGFRPPAPPPLPPPVPPYH---HQHY------HYDDRDECSSFLHGCLATLCCC
        +PP   YPP G PPP    P   P  G+P  G PPP Q Y Q Y   G+ PP  P   PP  PY      HY      +  D+ +   F+ GCLA LCCC
Subjt:  HPPPAIYPPPGCPPPQPAFPGNPPPPGFP--GDPPPPQVY-QDYFYDGFRPPAPPPLPPPVPPYH---HQHY------HYDDRDECSSFLHGCLATLCCC

Query:  CMLEEC
         +LE C
Subjt:  CMLEEC

AT4G33660.1 unknown protein4.7e-0441.25Show/hide
Query:  PQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLEEC
        P+ A+P  P P  +P  PPPP      +Y    PP PPP PPP PP                FL G LA LCCCC+++EC
Subjt:  PQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLEEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACTCTTATGGCTACCACCACCCTCCGCCGGCAATCTACCCTCCTCCCGGCTGCCCTCCGCCGCAGCCTGCCTTTCCCGGTAATCCGCCTCCGCCTGGATTCCC
CGGCGACCCTCCGCCGCCCCAAGTCTATCAAGACTATTTCTATGATGGGTTTCGTCCACCGGCGCCTCCCCCTCTGCCGCCGCCCGTCCCGCCCTATCACCATCAGCACT
ATCACTACGACGATCGAGATGAATGCTCCTCTTTCCTTCATGGGTGTTTAGCTACACTTTGTTGCTGTTGTATGCTGGAGGAGTGCTTGGCTTGCTTCCGGTAG
mRNA sequenceShow/hide mRNA sequence
TGCTTCCAACTACTTCTCACAAGACAGAAAATAAACCCACCACATTAAGCAAACAAAAGGGAACAATTCCAAATTTGTGTTCATTTTGTGTTTGTTTCTTCCATTTCTTC
AATCTCCATCGGAATTATGAGTTACTCTTATGGCTACCACCACCCTCCGCCGGCAATCTACCCTCCTCCCGGCTGCCCTCCGCCGCAGCCTGCCTTTCCCGGTAATCCGC
CTCCGCCTGGATTCCCCGGCGACCCTCCGCCGCCCCAAGTCTATCAAGACTATTTCTATGATGGGTTTCGTCCACCGGCGCCTCCCCCTCTGCCGCCGCCCGTCCCGCCC
TATCACCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCTTTCCTTCATGGGTGTTTAGCTACACTTTGTTGCTGTTGTATGCTGGAGGAGTGCTTGGCTTG
CTTCCGGTAGGCATTACGAAATCGGTATTTTCTCAGTTTGTTGGGCTGTGCTGTGTGCTCGTTTTCGATTATGGAGCAATTCCTGTTTTCGAGTAACTGGAAATAAGATT
TGTAGTTTTCTGGGTTGTGTGATTGTGAACTTTTTGTGTTGTTTGATACCTAAAAACTATTATTTACTTGTCTACAATACCTAAACAAATAATAGCCTTTTTAAACTACA
AATAATAGATAATAGTTAAATATTAGTAGACTTGGAATCTTGTTTTCATTCAGATTCAACTTTCCTTGATATTTTATGATACAAATTTTCTATGGAGCCTTGATATAGAA
AGGAGAATATGGTATTTGAAA
Protein sequenceShow/hide protein sequence
MSYSYGYHHPPPAIYPPPGCPPPQPAFPGNPPPPGFPGDPPPPQVYQDYFYDGFRPPAPPPLPPPVPPYHHQHYHYDDRDECSSFLHGCLATLCCCCMLEECLACFR