CuGenDBv2

Gene ID	Sed0026299
Organism	Sechium edule (Chayote v1)
Description	phosphatidylinositol transfer protein 3-like
Genome location	LG04:3879609..3882927
RNA-Seq Expression	Sed0026299
Synteny	Sed0026299
Gene Ontology terms	NA
InterPro domains	IPR001251 - CRAL-TRIO lipid binding domain IPR036865 - CRAL-TRIO lipid binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7031707.1 SPBC29A10.10c, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-32

47.89

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Query:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTL-------SSTTKHKFSYLVYCME----
        RA+N  NVKKATK+LKA L                                   RTVI MRPCRQ    F  L       S T K +  YLVYCME    
Subjt:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTL-------SSTTKHKFSYLVYCME----

Query:  ---------------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESA
                        DF+MSNISLKAT ETAHVL E Y ER+G  IL++AP  FEP WMVAKPFLET+TANKVK            +E+LF+MDQLESA
Subjt:  ---------------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESA

Query:  FGGSNNVSFNITK
        FGG+N+VSFNITK
Subjt:  FGGSNNVSFNITK

TYK18594.1 random slug protein 5-like [Cucumis melo var. makuwa]

7.1e-33

49.03

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Query:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------
        RA+N  NVKKATK+LKA L                                   RTVI MRPCRQ        S T K +  YLVYCME           
Subjt:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------

Query:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV
                 DF+MSNISLKAT ETAHVL E Y ER+G  IL++AP  FEP WMVAKPFLET+TANKVK            +E+LFDMDQLESAFGG+NNV
Subjt:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV

Query:  SFNITK
         FNITK
Subjt:  SFNITK

XP_004150523.1 phosphatidylinositol transfer protein 3 isoform X1 [Cucumis sativus]

9.3e-33

48.54

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Query:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------
        RA+N  NVKKATK+LKA L                                   RTVI MRPCRQ        S T K +  YLVYCME           
Subjt:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------

Query:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV
                 DF+MSNISLKAT ETAH+L E Y ER+G  IL++AP  FEP WMVAKPFLET+TANKVK            +E+LFDMDQLESAFGG+NNV
Subjt:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV

Query:  SFNITK
         FNITK
Subjt:  SFNITK

XP_008444104.1 PREDICTED: random slug protein 5-like [Cucumis melo]

7.1e-33

49.03

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Query:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------
        RA+N  NVKKATK+LKA L                                   RTVI MRPCRQ        S T K +  YLVYCME           
Subjt:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------

Query:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV
                 DF+MSNISLKAT ETAHVL E Y ER+G  IL++AP  FEP WMVAKPFLET+TANKVK            +E+LFDMDQLESAFGG+NNV
Subjt:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV

Query:  SFNITK
         FNITK
Subjt:  SFNITK

XP_022940569.1 phosphatidylinositol transfer protein 3-like [Cucurbita moschata]

4.6e-32

48.54

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Query:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------
        RA+N  NVKKATK+LKA L                                   RTVI MRPCRQ        S T K +  YLVYCME           
Subjt:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------

Query:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV
                 DF+MSNISLKAT ETAHVL E Y ER+G  IL++AP  FEP WMVAKPFLET+TANKVK            +E+LF+MDQLESAFGG+N+V
Subjt:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV

Query:  SFNITK
        SFNITK
Subjt:  SFNITK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L1Z8 CRAL-TRIO domain-containing protein

4.5e-33

48.54

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Query:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------
        RA+N  NVKKATK+LKA L                                   RTVI MRPCRQ        S T K +  YLVYCME           
Subjt:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------

Query:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV
                 DF+MSNISLKAT ETAH+L E Y ER+G  IL++AP  FEP WMVAKPFLET+TANKVK            +E+LFDMDQLESAFGG+NNV
Subjt:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV

Query:  SFNITK
         FNITK
Subjt:  SFNITK

A0A1S3BAC1 random slug protein 5-like

3.4e-33

49.03

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Query:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------
        RA+N  NVKKATK+LKA L                                   RTVI MRPCRQ        S T K +  YLVYCME           
Subjt:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------

Query:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV
                 DF+MSNISLKAT ETAHVL E Y ER+G  IL++AP  FEP WMVAKPFLET+TANKVK            +E+LFDMDQLESAFGG+NNV
Subjt:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV

Query:  SFNITK
         FNITK
Subjt:  SFNITK

A0A5A7VAG2 Random slug protein 5-like

3.4e-33

49.03

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Query:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------
        RA+N  NVKKATK+LKA L                                   RTVI MRPCRQ        S T K +  YLVYCME           
Subjt:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------

Query:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV
                 DF+MSNISLKAT ETAHVL E Y ER+G  IL++AP  FEP WMVAKPFLET+TANKVK            +E+LFDMDQLESAFGG+NNV
Subjt:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV

Query:  SFNITK
         FNITK
Subjt:  SFNITK

A0A5D3D4Y6 Random slug protein 5-like

3.4e-33

49.03

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Query:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------
        RA+N  NVKKATK+LKA L                                   RTVI MRPCRQ        S T K +  YLVYCME           
Subjt:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------

Query:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV
                 DF+MSNISLKAT ETAHVL E Y ER+G  IL++AP  FEP WMVAKPFLET+TANKVK            +E+LFDMDQLESAFGG+NNV
Subjt:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV

Query:  SFNITK
         FNITK
Subjt:  SFNITK

A0A6J1FR04 phosphatidylinositol transfer protein 3-like

2.2e-32

48.54

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Query:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------
        RA+N  NVKKATK+LKA L                                   RTVI MRPCRQ        S T K +  YLVYCME           
Subjt:  RAKNLNNVKKATKLLKAIL-----------------------------------RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME-----------

Query:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV
                 DF+MSNISLKAT ETAHVL E Y ER+G  IL++AP  FEP WMVAKPFLET+TANKVK            +E+LF+MDQLESAFGG+N+V
Subjt:  --------IDFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNV

Query:  SFNITK
        SFNITK
Subjt:  SFNITK

SwissProt top hits

e value

%identity

Alignment

Q10138 CRAL-TRIO domain-containing protein C3H8.02

1.4e-04

32.14

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Query:  DFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK-------LENLFDMDQLESAFGGSN
        DF+MSN+               Y E +G  I+H AP LF+ VW + K +L+    +KVK       L+   + D +   FGG N
Subjt:  DFNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK-------LENLFDMDQLESAFGGSN

Arabidopsis top hits

e value

%identity

Alignment

AT1G22180.1 Sec14p-like phosphatidylinositol transfer family protein

2.3e-21

43.14

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Query:  RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME----------------ID---FNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMV
        RTV+ MRP  Q  + +       K +   LVYCME                ID   FNMS+ISLK + ETAHVL E Y ER+G  I+++ P +FE  + +
Subjt:  RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME----------------ID---FNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMV

Query:  AKPFLETQTANKVK------------LENLFDMDQLESAFGGSN-NVSFNITK
         KPFLE +T+NKVK            LE+LFDM+QLE AFGG N +  FN  K
Subjt:  AKPFLETQTANKVK------------LENLFDMDQLESAFGGSN-NVSFNITK

AT1G22180.2 Sec14p-like phosphatidylinositol transfer family protein

2.3e-21

43.14

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Query:  RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME----------------ID---FNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMV
        RTV+ MRP  Q  + +       K +   LVYCME                ID   FNMS+ISLK + ETAHVL E Y ER+G  I+++ P +FE  + +
Subjt:  RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME----------------ID---FNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMV

Query:  AKPFLETQTANKVK------------LENLFDMDQLESAFGGSN-NVSFNITK
         KPFLE +T+NKVK            LE+LFDM+QLE AFGG N +  FN  K
Subjt:  AKPFLETQTANKVK------------LENLFDMDQLESAFGGSN-NVSFNITK

AT1G22180.3 Sec14p-like phosphatidylinositol transfer family protein

2.3e-21

43.14

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Query:  RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME----------------ID---FNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMV
        RTV+ MRP  Q  + +       K +   LVYCME                ID   FNMS+ISLK + ETAHVL E Y ER+G  I+++ P +FE  + +
Subjt:  RTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCME----------------ID---FNMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMV

Query:  AKPFLETQTANKVK------------LENLFDMDQLESAFGGSN-NVSFNITK
         KPFLE +T+NKVK            LE+LFDM+QLE AFGG N +  FN  K
Subjt:  AKPFLETQTANKVK------------LENLFDMDQLESAFGGSN-NVSFNITK

AT4G08690.1 Sec14p-like phosphatidylinositol transfer family protein

6.0e-22

36.18

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Query:  RAKNLNNVKKATKLLKAILRTVIAMRP---CRQ-------------------------FQRPFKTLSSTTKHKFSYLVYCME----------------ID
        RA+N  +VKKATK+LK  L+  +  +P   C +                           RP    S + K +  YLVYCME                ID
Subjt:  RAKNLNNVKKATKLLKAILRTVIAMRP---CRQ-------------------------FQRPFKTLSSTTKHKFSYLVYCME----------------ID

Query:  F---NMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNVSFNITK
        F   +++N+SL+ T ETAHVL E Y ER+   +L++ P  FEP W VA+PFLE +T NKVK            +E  FDM+++E AFGG+++  FNI K
Subjt:  F---NMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNVSFNITK

AT4G08690.2 Sec14p-like phosphatidylinositol transfer family protein

6.0e-22

36.18

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Query:  RAKNLNNVKKATKLLKAILRTVIAMRP---CRQ-------------------------FQRPFKTLSSTTKHKFSYLVYCME----------------ID
        RA+N  +VKKATK+LK  L+  +  +P   C +                           RP    S + K +  YLVYCME                ID
Subjt:  RAKNLNNVKKATKLLKAILRTVIAMRP---CRQ-------------------------FQRPFKTLSSTTKHKFSYLVYCME----------------ID

Query:  F---NMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNVSFNITK
        F   +++N+SL+ T ETAHVL E Y ER+   +L++ P  FEP W VA+PFLE +T NKVK            +E  FDM+++E AFGG+++  FNI K
Subjt:  F---NMSNISLKATIETAHVLHERYSERIGSTILHDAPTLFEPVWMVAKPFLETQTANKVK------------LENLFDMDQLESAFGGSNNVSFNITK

Sequences

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CDS sequence

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ATGAAACCTAAATTACAAAAAGAATCAGGATCAAAATCAATAACAAAGAGCCTGTCCAAAAAAAGAAGAAAATCAATAAACTTTAGAGCAAAAAACTTGAATAATGTGAA
GAAGGCCACTAAACTGCTGAAAGCAATTTTGAGAACAGTTATAGCCATGAGACCTTGTCGCCAGTTTCAACGGCCTTTTAAAACATTAAGCTCAACTACTAAGCACAAAT
TTAGTTACTTGGTGTATTGCATGGAGATTGATTTTAACATGTCAAATATTTCACTGAAAGCAACAATAGAGACTGCACATGTTTTACACGAACGTTATTCCGAACGCATC
GGATCGACAATTCTACACGACGCGCCTACGCTTTTTGAACCCGTCTGGATGGTTGCAAAGCCTTTCCTGGAGACACAAACTGCCAACAAAGTGAAATTGGAGAATCTGTT
CGATATGGACCAGCTAGAGTCTGCATTTGGTGGAAGCAATAATGTTAGTTTCAACATAACCAAATAA

mRNA sequence

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Protein sequence

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MKPKLQKESGSKSITKSLSKKRRKSINFRAKNLNNVKKATKLLKAILRTVIAMRPCRQFQRPFKTLSSTTKHKFSYLVYCMEIDFNMSNISLKATIETAHVLHERYSERI
GSTILHDAPTLFEPVWMVAKPFLETQTANKVKLENLFDMDQLESAFGGSNNVSFNITK

Sed0026299 (gene) of Chayote v1 genome