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Sed0026302 (gene) of Chayote v1 genome

Gene IDSed0026302
OrganismSechium edule (Chayote v1)
DescriptionGATA-N domain-containing protein
Genome locationLG04:2530977..2534669
RNA-Seq ExpressionSed0026302
SyntenySed0026302
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146444.1 uncharacterized protein LOC101211273 [Cucumis sativus]1.7e-7484.66Show/hide
Query:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA
        MVAICP HGGFPSQLGQG K+ R R   R  NLRV AEKGE RE GGG    E KKSLFSSVTEALDFS VRS+RDAELLDDARQATK+GGRM+REQYGA
Subjt:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA

Query:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR
        L+RKIGGTYKDFFKSYIEVDG+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKSNSS GNFFSKFFS+
Subjt:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR

XP_008456929.1 PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo]5.6e-7384.66Show/hide
Query:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA
        MVAI P HGGFPSQLGQG K+ R R   R  NLRV AEKGE RE  GG    E KKSLFSSVTEALDFS VRSSRDAELLDDARQATK+GGRMTREQYGA
Subjt:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA

Query:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR
        L+RKIGGTYKDFFKSYIEVDG+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKSNSSSGNFFSK FS+
Subjt:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR

XP_022941869.1 uncharacterized protein LOC111447101 [Cucurbita moschata]3.5e-6779.89Show/hide
Query:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA
        MVAI P H GF SQ GQG K AR     R  NLRV+A+  E  EE   GG R+ K+SLFSSVTEALDFSQVRSSRDAELLDDARQATK+GGRM+REQYGA
Subjt:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA

Query:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFF
        L+RKIGGTYKDFFKSYIEVDG+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRY HVACLEKSNSSS NFF+KFF
Subjt:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFF

XP_023532465.1 uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo]2.3e-6679.31Show/hide
Query:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA
        MVAI P H GF SQ GQG K AR     R  NLRV+A+  E  EE    G R+ K+SLFSSVTEALDFSQVRSSRDAELLDDARQATK+GGRM+REQYGA
Subjt:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA

Query:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFF
        L+RKIGGTYKDFFKSYIEVDG+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRY HVACLEKSNSSS NFF+KFF
Subjt:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFF

XP_038891315.1 uncharacterized protein LOC120080762 [Benincasa hispida]2.4e-7184.36Show/hide
Query:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRV---AAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQ
        MVAI P HGGFPSQL QG K  R R   R  NLRV   AAEKGE RE GGGGG  E KKSLFSSVTEALDFS VRSSRDAELLDDARQATK+GGRMTREQ
Subjt:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRV---AAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQ

Query:  YGALKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR
        YGAL+RKIGGTYKDFFKSYIEVDG+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKS SSSGNFFSK FS+
Subjt:  YGALKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR

TrEMBL top hitse value%identityAlignment
A0A0A0KM41 GATA-N domain-containing protein8.5e-7584.66Show/hide
Query:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA
        MVAICP HGGFPSQLGQG K+ R R   R  NLRV AEKGE RE GGG    E KKSLFSSVTEALDFS VRS+RDAELLDDARQATK+GGRM+REQYGA
Subjt:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA

Query:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR
        L+RKIGGTYKDFFKSYIEVDG+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKSNSS GNFFSKFFS+
Subjt:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR

A0A1S3C3X8 uncharacterized protein LOC1034967312.7e-7384.66Show/hide
Query:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA
        MVAI P HGGFPSQLGQG K+ R R   R  NLRV AEKGE RE  GG    E KKSLFSSVTEALDFS VRSSRDAELLDDARQATK+GGRMTREQYGA
Subjt:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA

Query:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR
        L+RKIGGTYKDFFKSYIEVDG+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKSNSSSGNFFSK FS+
Subjt:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR

A0A5D3DFR3 GATA-N domain-containing protein2.7e-7384.66Show/hide
Query:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA
        MVAI P HGGFPSQLGQG K+ R R   R  NLRV AEKGE RE  GG    E KKSLFSSVTEALDFS VRSSRDAELLDDARQATK+GGRMTREQYGA
Subjt:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA

Query:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR
        L+RKIGGTYKDFFKSYIEVDG+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKSNSSSGNFFSK FS+
Subjt:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR

A0A6J1D0J3 uncharacterized protein LOC1110159361.4e-6679.43Show/hide
Query:  VAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGAL
        VAI P HGGFP    QG  A+R+   GR  N RV+A+     EE   GGG+E KKSLFSSVTEALDFSQVRSSRDAELL+DARQAT+SGGRMTREQYGAL
Subjt:  VAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGAL

Query:  KRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR
        +RKIGGTYKDFFKSYIEVDG+YVEEGWVDKTCKVCKKDT+GEARQVDKLG YVHVACLE SNSSSGNFFSKFFS+
Subjt:  KRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR

A0A6J1FPP4 uncharacterized protein LOC1114471011.7e-6779.89Show/hide
Query:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA
        MVAI P H GF SQ GQG K AR     R  NLRV+A+  E  EE   GG R+ K+SLFSSVTEALDFSQVRSSRDAELLDDARQATK+GGRM+REQYGA
Subjt:  MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGA

Query:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFF
        L+RKIGGTYKDFFKSYIEVDG+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRY HVACLEKSNSSS NFF+KFF
Subjt:  LKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G56290.1 unknown protein8.4e-5165.58Show/hide
Query:  RVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVDGK
        R+ +  R   +    EK E +++       EE+ SLF+ +T+ALDFSQVRS +DAELL +AR+ATKSG +MT+EQYGAL+RKIGGTYKDFFKSY+EVDG+
Subjt:  RVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVDGK

Query:  YVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR
        YVEEGWVDKTCK+CKKDTKGEARQVDKLGRY HV+CL+  N  SGNFF++ FSR
Subjt:  YVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCGATTTGTCCGCCGCACGGCGGATTTCCGTCGCAATTAGGGCAGGGATTGAAGGCGGCTAGGGTTAGGCAAACTGGCCGGGGATTCAATTTGAGAGTGGCGGC
GGAGAAGGGCGAGGGGAGAGAAGAAGGCGGCGGCGGCGGCGGAAGGGAGGAGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGATCGA
GTCGCGACGCTGAGCTTCTCGATGACGCCCGTCAGGCCACCAAATCCGGCGGTAGAATGACCCGCGAACAGTATGGAGCTCTAAAGAGGAAGATAGGAGGAACGTACAAG
GATTTCTTCAAATCTTACATAGAAGTGGATGGGAAATATGTTGAGGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAAAAGGACACAAAAGGAGAGGCAAGACAAGT
TGATAAACTTGGAAGATATGTTCATGTTGCTTGTTTGGAGAAATCCAACTCTTCCTCAGGAAATTTCTTCTCCAAATTCTTCTCGAGATAA
mRNA sequenceShow/hide mRNA sequence
GACTGATTGGACAAAAAAACACACCATTTACATATGAATAACTAACTTTCGCATATTAAATTCGCAAGCAATACCGAACGAGAAAAATTATCTTTTAGGTTTTATCAAAC
TATAGAGACTATATGCTAAACCAGGTAGATTAAATTCTAATTTTCTTTAAATCATATGGGTCATCAAGCCATTAAACCACTAAGCCCTAACTTGTGTCCCCACACAAACA
TGTGGATCCTAAATTTAAAGCTCCCATCTCATTCACAACCATAAATTAAGTGTCAAACAAATTCCAAGGATTCATAACCTAGCAAAAAAGAAGTGGCATTCCTAATGGAT
ACTAGAACAACAATAATAACAACAAAACAATCAAATGGCCCTAGAAGACCGAGAGATCAAGAGTATCAAACACAACCACGTAGCTTCATAGCAACCACACCGCCCAATCT
CCGCCTACCACTAGCATTCACTTACCTTTAAAACAGAGCAACTCCGCTGATTCTTCGAATCCGAGCCCTAATCAACCGAACTAACCGGCGGCGGTGGAGGAAGCGATGGT
GGCGATTTGTCCGCCGCACGGCGGATTTCCGTCGCAATTAGGGCAGGGATTGAAGGCGGCTAGGGTTAGGCAAACTGGCCGGGGATTCAATTTGAGAGTGGCGGCGGAGA
AGGGCGAGGGGAGAGAAGAAGGCGGCGGCGGCGGCGGAAGGGAGGAGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGATCGAGTCGC
GACGCTGAGCTTCTCGATGACGCCCGTCAGGCCACCAAATCCGGCGGTAGAATGACCCGCGAACAGTATGGAGCTCTAAAGAGGAAGATAGGAGGAACGTACAAGGATTT
CTTCAAATCTTACATAGAAGTGGATGGGAAATATGTTGAGGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAAAAGGACACAAAAGGAGAGGCAAGACAAGTTGATA
AACTTGGAAGATATGTTCATGTTGCTTGTTTGGAGAAATCCAACTCTTCCTCAGGAAATTTCTTCTCCAAATTCTTCTCGAGATAAGATAGTCGAGTTACGTGTTAATTC
GATCGTATAAACTTTAATTTGTATGACTTGTATTTAGTTTATAAAGTTTATCACAATGTATATGTAAAAGTTAGATTTGTAGCACTTTGAGTTTATTTATCGATTGTGGG
ATGAAAAGTTTTGGTTTGGG
Protein sequenceShow/hide protein sequence
MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYK
DFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR