CuGenDBv2

Gene ID	Sed0026303
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG02:44967627..44968272
RNA-Seq Expression	Sed0026303
Synteny	Sed0026303
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6580574.1 hypothetical protein SDJN03_20576, partial [Cucurbita argyrosperma subsp. sororia]

3.0e-45

68.59

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Query:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------
        MSAVC++N CIS  D G RPPRAAYINL NWTD D E  KSAI    RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRC  KVK KLGQ         
Subjt:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------

Query:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN
              RNRNRK  C IWRKMK+FSC FVLF  FRRIL+C+ASVDVVE  SG  GN
Subjt:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN

KAG7017326.1 hypothetical protein SDJN02_19189, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-45

68.59

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Query:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------
        MSAVC++N CIS  D G RPPRAAYINL NWTDSD E  KSAI    RRVPV DGVSCRQ+YLRSYKFSTKESV EKTRRC  KVK KLGQ         
Subjt:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------

Query:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN
              RNRNRK  C IWRKMK+FSC FVLF  FRRIL+C+ASVDVVE  SG  GN
Subjt:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN

XP_022934190.1 uncharacterized protein LOC111441435 [Cucurbita moschata]

6.0e-46

69.23

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Query:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------
        MSAVC++N CIS  D G RPPRAAYINL NWTDSD E  KSAI    RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRC  KVK KLGQ         
Subjt:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------

Query:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN
              RNRNRK  C IWRKMK+FSC FVLF  FRRIL+C+ASVDVVE  SG  GN
Subjt:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN

XP_022983914.1 uncharacterized protein LOC111482393 [Cucurbita maxima]

1.6e-46

69.87

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Query:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------
        MSAVC++N CIS  D G RPPRAAYINL NWTDSD E  KSAI    RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRC  KVK KLGQ         
Subjt:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------

Query:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN
              RNRNRK  C IWRKMK+FSC FVLF  FRRIL+C+ASVDVVEQ SG  GN
Subjt:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN

XP_023528009.1 uncharacterized protein LOC111791056 [Cucurbita pepo subsp. pepo]

1.6e-46

69.87

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Query:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------
        MSAVC++N CIS  D G RPPRAAYINL NWTDSD E  KSAI    RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRC  KVK KLGQ         
Subjt:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------

Query:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN
              RNRNRK  C IWRKMK+FSC FVLF  FRRIL+C+ASVDVVEQ SG  GN
Subjt:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B628 uncharacterized protein LOC103486422

1.1e-37

59.26

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Query:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFS-TKESVPEKTRRCFGKVKRKLGQR-------
        MSAVC++  CIS A    R PRA YINL NWTDS+ E+ KSA+    RRV V DGVSCRQMYLRSYKFS  KESV EKT++C  KVK KLGQR       
Subjt:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFS-TKESVPEKTRRCFGKVKRKLGQR-------

Query:  -------------NRNRK----CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGR
                     NR RK     CLIW+KMK+FSC F++FG FRRILSCAA++DVVEQS GR
Subjt:  -------------NRNRK----CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGR

A0A5D3DNA8 Uncharacterized protein

1.1e-37

59.26

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Query:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFS-TKESVPEKTRRCFGKVKRKLGQR-------
        MSAVC++  CIS A    R PRA YINL NWTDS+ E+ KSA+    RRV V DGVSCRQMYLRSYKFS  KESV EKT++C  KVK KLGQR       
Subjt:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFS-TKESVPEKTRRCFGKVKRKLGQR-------

Query:  -------------NRNRK----CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGR
                     NR RK     CLIW+KMK+FSC F++FG FRRILSCAA++DVVEQS GR
Subjt:  -------------NRNRK----CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGR

A0A6J1CV59 uncharacterized protein LOC111015072

3.9e-43

68.03

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Query:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------
        MS++C+++ CIS  D G RPPR AYINL++WTDSD E+AKSA     RRV VADGVSCRQMYLRSYKFS KESVPEKTRRC G+VK K+G+         
Subjt:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------

Query:  RNRNRKCCL-IWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGR
        RNR RKC +  WRKMKEFSC  +LFG FRRILSCAASVDVVE S+GR
Subjt:  RNRNRKCCL-IWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGR

A0A6J1F6Z2 uncharacterized protein LOC111441435

2.9e-46

69.23

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Query:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------
        MSAVC++N CIS  D G RPPRAAYINL NWTDSD E  KSAI    RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRC  KVK KLGQ         
Subjt:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------

Query:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN
              RNRNRK  C IWRKMK+FSC FVLF  FRRIL+C+ASVDVVE  SG  GN
Subjt:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN

A0A6J1J8Y5 uncharacterized protein LOC111482393

7.6e-47

69.87

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Query:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------
        MSAVC++N CIS  D G RPPRAAYINL NWTDSD E  KSAI    RRVPV DGVSCRQMYLRSYKFSTKESV EKTRRC  KVK KLGQ         
Subjt:  MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAI----RRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQ---------

Query:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN
              RNRNRK  C IWRKMK+FSC FVLF  FRRIL+C+ASVDVVEQ SG  GN
Subjt:  ------RNRNRK-CCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVEQSSGRTGN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G46300.1 unknown protein

9.6e-10

36.13

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Query:  PRAAYINLYNWTDSDGEVAKS-----AIRRVPVADGVSCRQMYLRSYKFSTKESVPE--------KTRRCFGKVKRKLGQRNRNRKCCLIWRKMKEFSCG
        P   Y NLY W  ++ E  +S     +  R  V D +SCRQMYLRSY FST+E+  +         TRR      R  G R +  K  +  R  K +SC 
Subjt:  PRAAYINLYNWTDSDGEVAKS-----AIRRVPVADGVSCRQMYLRSYKFSTKESVPE--------KTRRCFGKVKRKLGQRNRNRKCCLIWRKMKEFSCG

Query:  FVLFGSFRRILSCAASVDV
          +F   R+ LSCA++  V
Subjt:  FVLFGSFRRILSCAASVDV

AT3G46310.1 unknown protein

7.9e-04

37.74

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Query:  PRAAYINLYNWTDSDGEVAKS-----AIRRVPVADGVSCRQMYLRSYKFSTKE
        P   +  ++ W  ++ E  +S     + RR    + +SCRQMYLRSY FS KE
Subjt:  PRAAYINLYNWTDSDGEVAKS-----AIRRVPVADGVSCRQMYLRSYKFSTKE

AT5G02640.1 unknown protein

2.4e-16

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Query:  MSAVCSSNRCISAADGGR---RPPRAAYINLYNWTDSDGEVAKSAIR-----RVPVADGVSCRQMYLRSYKFSTK--ESVPEKT-----RRCFGKVK---
        M++VC S+ CI+ A   R   RP RA+Y+NLY W +SD E  +S  R        V D +SCRQMYLRSY FS +  ES  EK        C G+VK   
Subjt:  MSAVCSSNRCISAADGGR---RPPRAAYINLYNWTDSDGEVAKSAIR-----RVPVADGVSCRQMYLRSYKFSTK--ESVPEKT-----RRCFGKVK---

Query:  ---RKLGQRN-----------RNRKCCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVE
           RK  + N           R  +   + RK K+     V+   FRR+LSCAA+VDVV+
Subjt:  ---RKLGQRN-----------RNRKCCLIWRKMKEFSCGFVLFGSFRRILSCAASVDVVE

Sequences

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CDS sequence

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ATGAGCGCCGTCTGTTCATCAAACCGCTGCATAAGCGCCGCCGACGGCGGCCGTCGTCCGCCGCGCGCCGCCTACATCAACCTCTACAACTGGACGGATTCCGACGGCGA
GGTCGCGAAATCGGCGATCCGGCGAGTTCCGGTGGCGGATGGAGTGTCGTGCAGGCAAATGTACTTGAGGAGCTATAAATTCTCGACGAAGGAATCGGTGCCGGAGAAAA
CGAGGAGGTGTTTCGGGAAAGTGAAGAGGAAATTAGGTCAGAGAAATCGGAATCGGAAGTGTTGTTTGATTTGGAGGAAGATGAAGGAATTTTCGTGCGGTTTCGTTCTG
TTTGGGAGTTTTCGGAGGATTTTGTCCTGTGCTGCGAGTGTTGATGTTGTGGAACAGAGCAGTGGAAGAACTGGTAATCGATTTTGA

mRNA sequence

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CCATTTTCACCTTAAAATTTCGCGTACATGTAAATTGAGCATTCCCCCAAAATTTTCAACATAAAATGAGCGCCGTCTGTTCATCAAACCGCTGCATAAGCGCCGCCGAC
GGCGGCCGTCGTCCGCCGCGCGCCGCCTACATCAACCTCTACAACTGGACGGATTCCGACGGCGAGGTCGCGAAATCGGCGATCCGGCGAGTTCCGGTGGCGGATGGAGT
GTCGTGCAGGCAAATGTACTTGAGGAGCTATAAATTCTCGACGAAGGAATCGGTGCCGGAGAAAACGAGGAGGTGTTTCGGGAAAGTGAAGAGGAAATTAGGTCAGAGAA
ATCGGAATCGGAAGTGTTGTTTGATTTGGAGGAAGATGAAGGAATTTTCGTGCGGTTTCGTTCTGTTTGGGAGTTTTCGGAGGATTTTGTCCTGTGCTGCGAGTGTTGAT
GTTGTGGAACAGAGCAGTGGAAGAACTGGTAATCGATTTTGAATTACGAATTTGCTCTGTTCTTCGATCTTGTTCTTCTTGTGTGATTGAATTTGATCTGGATTTTGGTT
GTGTTGAGTTCTTCTTTTTGTTTTTTAGTATGAAACTTGCCTGTTGTTCTTTTTCAGATTGAAATTATTATTCATCAATTCATCCTGATTTCTTTA

Protein sequence

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MSAVCSSNRCISAADGGRRPPRAAYINLYNWTDSDGEVAKSAIRRVPVADGVSCRQMYLRSYKFSTKESVPEKTRRCFGKVKRKLGQRNRNRKCCLIWRKMKEFSCGFVL
FGSFRRILSCAASVDVVEQSSGRTGNRF

Sed0026303 (gene) of Chayote v1 genome