; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026310 (gene) of Chayote v1 genome

Gene IDSed0026310
OrganismSechium edule (Chayote v1)
Descriptionupstream activation factor subunit spp27-like
Genome locationLG07:42350225..42355273
RNA-Seq ExpressionSed0026310
SyntenySed0026310
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150254.1 angiomotin isoform X2 [Cucumis sativus]1.1e-16085.8Show/hide
Query:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ-----QKDLFALHQSP
        MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFILRSHPQQPHH  HHHHHHHQ   QQ     QKDLFALHQSP
Subjt:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ-----QKDLFALHQSP

Query:  NFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR
        NF SAPSPTSSAFH F+AQPPP  P++ VAP V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR
Subjt:  NFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR

Query:  KIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRF
        KIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+ 
Subjt:  KIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRF

Query:  NHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  NHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_008447697.1 PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo]1.3e-15884.97Show/hide
Query:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ------QKDLFALHQS
        MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFILRSHPQQPHH  HHHHHHHQ   QQ      QKDLFALHQS
Subjt:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ------QKDLFALHQS

Query:  PNFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
        PNF SAPSPTSSAFH F AQPP    ++ VAP V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Subjt:  PNFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK

Query:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR
        RKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+
Subjt:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR

Query:  FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
         NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_031744592.1 angiomotin isoform X1 [Cucumis sativus]2.6e-15985.55Show/hide
Query:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ-----QKDLFALHQSP
        MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFILRSHPQQPHH  HHHHHHHQ   QQ     QKDLFALHQSP
Subjt:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ-----QKDLFALHQSP

Query:  NFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKE-STQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
        NF SAPSPTSSAFH F+AQPPP  P++ VAP V GSDPPKE STQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Subjt:  NFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKE-STQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK

Query:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR
        RKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+
Subjt:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR

Query:  FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
         NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_038900172.1 uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida]4.3e-15484.75Show/hide
Query:  MVSDQELSQALQCLLASNPN-PNPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSA
        MV+DQELSQA+QCLL  + +  NPNP SS+N VV +LQ+KLGLDLSHK+DFIHAQIQFILRSHPQQPH    +HHHHHQ L   QKDLFALHQSPNF SA
Subjt:  MVSDQELSQALQCLLASNPN-PNPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSA

Query:  PSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKE-STQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC
        PSPTSSAFH F AQ PP   E+AV+P V GSDPPKE STQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC
Subjt:  PSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKE-STQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC

Query:  NDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLE
        NDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKARVENES++GVKGA   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+ NHLE
Subjt:  NDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLE

Query:  DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        DPLNPMAVLCD KL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_038900174.1 uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida]1.7e-15585Show/hide
Query:  MVSDQELSQALQCLLASNPN-PNPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSA
        MV+DQELSQA+QCLL  + +  NPNP SS+N VV +LQ+KLGLDLSHK+DFIHAQIQFILRSHPQQPH    +HHHHHQ L   QKDLFALHQSPNF SA
Subjt:  MVSDQELSQALQCLLASNPN-PNPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSA

Query:  PSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICN
        PSPTSSAFH F AQ PP   E+AV+P V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICN
Subjt:  PSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICN

Query:  DELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLED
        DELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKARVENES++GVKGA   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+ NHLED
Subjt:  DELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLED

Query:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        PLNPMAVLCD KL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

TrEMBL top hitse value%identityAlignment
A0A0A0LEG4 Uncharacterized protein5.1e-16185.8Show/hide
Query:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ-----QKDLFALHQSP
        MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFILRSHPQQPHH  HHHHHHHQ   QQ     QKDLFALHQSP
Subjt:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ-----QKDLFALHQSP

Query:  NFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR
        NF SAPSPTSSAFH F+AQPPP  P++ VAP V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR
Subjt:  NFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKR

Query:  KIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRF
        KIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+ 
Subjt:  KIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRF

Query:  NHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  NHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A1S3BI07 uncharacterized protein LOC103490111 isoform X16.2e-15984.97Show/hide
Query:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ------QKDLFALHQS
        MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFILRSHPQQPHH  HHHHHHHQ   QQ      QKDLFALHQS
Subjt:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ------QKDLFALHQS

Query:  PNFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
        PNF SAPSPTSSAFH F AQPP    ++ VAP V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Subjt:  PNFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK

Query:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR
        RKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+
Subjt:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR

Query:  FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
         NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A5D3C9T5 Box A-binding factor isoform X26.2e-15984.97Show/hide
Query:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ------QKDLFALHQS
        MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFILRSHPQQPHH  HHHHHHHQ   QQ      QKDLFALHQS
Subjt:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQ------QKDLFALHQS

Query:  PNFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
        PNF SAPSPTSSAFH F AQPP    ++ VAP V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEIVKQLWAYIRKNNLQDPSNK
Subjt:  PNFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNK

Query:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR
        RKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+
Subjt:  RKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR

Query:  FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
         NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A6J1FLX5 uncharacterized protein LOC1114466116.7e-15384.75Show/hide
Query:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSA
        MVSDQELS+ALQCLL  + +P NPNPFSS+N VV +LQSKLGLDLSHK+DFIHAQIQ ILRSHPQQP    +HHH   Q     QKD+   HQSPNFPSA
Subjt:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSA

Query:  PSPTSSAFHIFAAQPPPVHPETAVAPAVA-GSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC
        PSPTSSAFH F AQPPP  PETA AP+ A GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC
Subjt:  PSPTSSAFHIFAAQPPPVHPETAVAPAVA-GSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC

Query:  NDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLE
        NDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVE+E +I VK A   EPS CPS+IISEALA+FFGVDGREMLQSEVL RIWEYIR NHLE
Subjt:  NDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLE

Query:  DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Subjt:  DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A6J1J2D3 uncharacterized protein LOC1114806261.9e-15284.75Show/hide
Query:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSA
        MVS+QELS+ALQCLL  + +P NPNPFSS+N VV +LQSKLGLDLSHK+DFIHAQIQ ILRSHPQQP    +HH+   Q     QKDL   HQSPNFPSA
Subjt:  MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSA

Query:  PSPTSSAFHIFAAQPPPVHPETAVAPAVA-GSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC
        PSPTSSAFH F AQPPP  PETA AP+ A GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC
Subjt:  PSPTSSAFHIFAAQPPPVHPETAVAPAVA-GSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIIC

Query:  NDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLE
        NDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENE +I VK A   EPS CPS+IISEALA+FFGVDGREMLQSEVL RIWEYIR NHLE
Subjt:  NDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLE

Query:  DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Subjt:  DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp271.0e-1246.99Show/hide
Query:  KTKRRGGPGG--LNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLL
        K KR   P    LNK   +SP L   +G  +L R + VK+LW YI+ ++LQDP++KR I+C+D+L+ VFE D   MF MNK L
Subjt:  KTKRRGGPGG--LNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLL

Q05024 Protein TRI13.4e-1338.24Show/hide
Query:  VSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIS-------LEPTKPSSSKKARVENESSIGV
        +S  LQ  +G  ELPRT++VK +W YI++++LQ+P ++R+I+C++++  +F    T MF MNKLL KH+ +        E  K +  K+ ++ENES   +
Subjt:  VSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIS-------LEPTKPSSSKKARVENESSIGV

Query:  KG
         G
Subjt:  KG

Q08747 Upstream activation factor subunit UAF301.3e-1246.15Show/hide
Query:  VSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS
        +S  L +++G+ EL RTE+V++LWAYI+ +NLQ+P+NK++I+C+++L L+     T+MF+M+K+LA H+   EP K S
Subjt:  VSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein1.1e-3030.2Show/hide
Query:  SDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHI-----
        +D  K     K K+RG  GG NK+C +SP L+  +G  +L RTE+VK++WAYIR+++LQDP+N+R I+C++ L  +F     +MF+MNK LAKHI     
Subjt:  SDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHI-----

Query:  ------------------------ISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPS------------MIISEALANFFGVDGREMLQSEVLTRI
                                + +E    ++ +++R E + S+  +  ++ +P+                  +S  L  F G    ++ ++EV+  +
Subjt:  ------------------------ISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPS------------MIISEALANFFGVDGREMLQSEVLTRI

Query:  WEYIRFNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRH
        W+YI+ N+L+DP +   ++CD  L+ LF  ESI+   + + L +H
Subjt:  WEYIRFNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRH

AT2G14880.1 SWIB/MDM2 domain superfamily protein1.2e-1337.61Show/hide
Query:  HPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFE-TDCTDMFKM
        HP   +    A +   + S  T T +R  P G+ K   VSP +Q IV  PE+ RT+ +K++WAYI++++LQDP NKR+I+C+++L+ +FE  D     ++
Subjt:  HPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFE-TDCTDMFKM

Query:  NKLLAKHII
         KL+  H +
Subjt:  NKLLAKHII

AT3G19080.1 SWIB complex BAF60b domain-containing protein2.3e-3638.68Show/hide
Query:  PKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKP
        P +S + K KR+GG GG  K+C +SP LQ   G  EL RTE+VK LW YI++NNLQDP++KR IIC++  R +F  +  +MF+MNK L KHI  LE    
Subjt:  PKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKP

Query:  SSSKKARVENESSIGVKGAERPEPSS---------CPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLEDPLNPMAVLCDAKLQELFGCESISA
         S      +N         +  EP+             + +S+AL  F G     + +++V+ R+WEYI  N L+DP +   V+CD KL+ELF  +S   
Subjt:  SSSKKARVENESSIGVKGAERPEPSS---------CPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLEDPLNPMAVLCDAKLQELFGCESISA

Query:  LGIPEVLGRHHI
          + ++L  H I
Subjt:  LGIPEVLGRHHI

AT4G22360.1 SWIB complex BAF60b domain-containing protein3.8e-7645.43Show/hide
Query:  MVSDQELSQALQCLLASNPNPNPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHP------------QQPHHLLHHHHHHHQHLHQ------
        MVSDQ+L++ ++ LL  +   +P+  +S++ +V QL++KLGLDL+ K  FI  QI  +LR+H             QQ H       H  Q+LH       
Subjt:  MVSDQELSQALQCLLASNPNPNPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHP------------QQPHHLLHHHHHHHQHLHQ------

Query:  QQKDLFAL---------HQSPNFPS--APSPTSSAFHIFAAQPPPV------HPETAVAP---------------AVAGSDPPKESTQTKTKRRGGPGGL
          K  F L          QS  +PS  A  P   ++ +   QP PV      H     +P               +++ +  PKES    TKR+GGPGGL
Subjt:  QQKDLFAL---------HQSPNFPS--APSPTSSAFHIFAAQPPPV------HPETAVAP---------------AVAGSDPPKESTQTKTKRRGGPGGL

Query:  NKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS-SSKKARVENESSIGVK
        NK+C VSP L+ +VG+P LPRTEIV+QLWAYIRKNNLQDPSNKRKIIC+D LR+VFETDCTDMFKMNKLLAKHI+ L+P+K S  +KKA+ E E+     
Subjt:  NKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS-SSKKARVENESSIGVK

Query:  GAERPEPSS----CPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
          E  EP S      ++ +SE L  FFG    EM   E++ R+WEYI+ N+LEDP+NPMA+ CD KL++L GCESISA+GI E+L R H++++S
Subjt:  GAERPEPSS----CPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

AT4G34290.1 SWIB/MDM2 domain superfamily protein1.1e-1436.89Show/hide
Query:  SAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRL
        S+  +    P  +    AV  A A S  P  +T TKT+    P G+ K   VS  +Q +VG PE+PRT+ +K++WAYI++++LQDP NKR I+C+++L+ 
Subjt:  SAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRL

Query:  VFE-TDCTDMFKMNKLLAKHII
        +FE  +     ++ KL+  H +
Subjt:  VFE-TDCTDMFKMNKLLAKHII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCAGACCAAGAGCTTTCTCAAGCTCTACAATGTCTCTTAGCTTCAAACCCTAACCCTAACCCTAACCCTTTTTCTTCCATAAACGACGTCGTTCACCAGTTGCA
GTCCAAGCTTGGCCTTGATTTGTCTCATAAGCTTGATTTCATCCATGCCCAGATCCAATTCATCCTTCGTTCTCATCCTCAACAACCCCATCATCTTCTTCATCATCATC
ATCATCATCATCAACATCTTCATCAGCAGCAAAAAGACCTCTTTGCCCTCCATCAAAGCCCTAATTTCCCATCTGCTCCTTCCCCTACTTCCTCTGCTTTTCATATTTTT
GCTGCTCAGCCTCCCCCGGTTCACCCGGAAACCGCCGTGGCTCCTGCTGTTGCCGGTTCTGACCCGCCCAAGGAGAGCACCCAGACGAAAACTAAGAGAAGAGGAGGCCC
AGGGGGTCTAAATAAGCTTTGTGGTGTTTCTCCTGTACTTCAGACTATTGTGGGCCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACATTCGAA
AAAACAACCTGCAGGATCCGAGTAACAAAAGGAAAATTATATGTAATGACGAGTTGCGGTTGGTATTCGAGACAGACTGCACTGACATGTTCAAAATGAATAAGTTGTTA
GCCAAACACATCATTTCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTAGAGAATGAATCTTCGATTGGAGTAAAAGGTGCCGAACGGCCCGAACCTAG
TAGTTGTCCTTCCATGATTATATCCGAAGCTCTTGCAAATTTTTTTGGTGTCGATGGAAGGGAGATGCTCCAATCGGAGGTTCTGACACGCATATGGGAATACATAAGAT
TCAATCATCTTGAGGACCCTCTAAACCCGATGGCAGTGTTGTGCGACGCGAAACTCCAGGAACTTTTTGGTTGTGAAAGCATTTCTGCACTGGGTATCCCAGAAGTCTTA
GGCCGCCACCATATATTTAGGAGATCGTGA
mRNA sequenceShow/hide mRNA sequence
CAATGATTGGTCTGTGTCATCACCCACCAAACCTTTGCAGTTACTCAAACCCCAAGCTTTGTCATTTTGTCTTTCCTTCTCAAAAAAAGAAGAGTTCTTGAGAGACATAG
AAACAAAAGAGAACCGTTAATTTCGGTTAATTCATGAACCAAATTTGAGAAGAAGAAGCTGCAACAACAAAAATGGTTTCAGACCAAGAGCTTTCTCAAGCTCTACAATG
TCTCTTAGCTTCAAACCCTAACCCTAACCCTAACCCTTTTTCTTCCATAAACGACGTCGTTCACCAGTTGCAGTCCAAGCTTGGCCTTGATTTGTCTCATAAGCTTGATT
TCATCCATGCCCAGATCCAATTCATCCTTCGTTCTCATCCTCAACAACCCCATCATCTTCTTCATCATCATCATCATCATCATCAACATCTTCATCAGCAGCAAAAAGAC
CTCTTTGCCCTCCATCAAAGCCCTAATTTCCCATCTGCTCCTTCCCCTACTTCCTCTGCTTTTCATATTTTTGCTGCTCAGCCTCCCCCGGTTCACCCGGAAACCGCCGT
GGCTCCTGCTGTTGCCGGTTCTGACCCGCCCAAGGAGAGCACCCAGACGAAAACTAAGAGAAGAGGAGGCCCAGGGGGTCTAAATAAGCTTTGTGGTGTTTCTCCTGTAC
TTCAGACTATTGTGGGCCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACATTCGAAAAAACAACCTGCAGGATCCGAGTAACAAAAGGAAAATT
ATATGTAATGACGAGTTGCGGTTGGTATTCGAGACAGACTGCACTGACATGTTCAAAATGAATAAGTTGTTAGCCAAACACATCATTTCTCTTGAACCTACAAAACCATC
AAGTTCTAAGAAGGCACGAGTAGAGAATGAATCTTCGATTGGAGTAAAAGGTGCCGAACGGCCCGAACCTAGTAGTTGTCCTTCCATGATTATATCCGAAGCTCTTGCAA
ATTTTTTTGGTGTCGATGGAAGGGAGATGCTCCAATCGGAGGTTCTGACACGCATATGGGAATACATAAGATTCAATCATCTTGAGGACCCTCTAAACCCGATGGCAGTG
TTGTGCGACGCGAAACTCCAGGAACTTTTTGGTTGTGAAAGCATTTCTGCACTGGGTATCCCAGAAGTCTTAGGCCGCCACCATATATTTAGGAGATCGTGATAGCTAAT
CTTCTAGGAATGGACTAGGAAGACAAACTAATGAATGCTGGTCTTAGATTGCAGTTGCAGATCGAGGGTGTTAGTCGCGTACATCGGGGCAGTGTTTGTAAAAGTCGATA
TGTTTTTTGTAATATTGTAATCAGTGATGATGGTGTTTTACTTTTGAATCATATGTTAAGGTAAGTAAGTAAGGTGTGAACTTGGGAATGTAAGATGGGGGCTTATGGCA
GAGTTTATTTTGTAATTGCCTGACAAGTCCTTGGGTGGTTTTCATTTGTCTGACTTGGTATTTAGGTTAGAATGACCTTGGGAACTAGTTCTAACATCCATACACTGCTG
ATGATGGGTAAAATTATGTTATCTACTCTAACTAGTTTGTTAAATATATGTTTTTATGTAGTAAAA
Protein sequenceShow/hide protein sequence
MVSDQELSQALQCLLASNPNPNPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSAPSPTSSAFHIF
AAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLL
AKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVL
GRHHIFRRS