CuGenDBv2

Gene ID	Sed0026368
Organism	Sechium edule (Chayote v1)
Description	Tail fiber
Genome location	LG07:5883371..5884835
RNA-Seq Expression	Sed0026368
Synteny	Sed0026368
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575585.1 hypothetical protein SDJN03_26224, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-67

70.19

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Query:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC-------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKF
        MASSKK A+TISRT+SSLYFLLIF Q+PLFRVPC       S + SCTTPLELTCSQ L+S+VFP   V+ LLYPGAIAKA+ +NKPIP F +L  +YKF
Subjt:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC-------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKF

Query:  IDVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKA
        I +K  PA    +DLHRLEVIAGSYLAVGGA+MGMVR GSGRMSLFGCLVA+WGIV RKSSY N   +   +YP MFLAV LAFLSVR+DVRRI+RCVKA
Subjt:  IDVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKA

Query:  RATSSWKK
        +   SWKK
Subjt:  RATSSWKK

KAG7014126.1 hypothetical protein SDJN02_24299 [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-67

70.19

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Query:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC-------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKF
        MASSKK A+TISRT+SSLYFLLIF Q+PLFRVPC       S + SCTTPLELTCSQ L+S+VFP   V+ LLYPGAIAKA+ +NKPIP F +L  +YKF
Subjt:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC-------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKF

Query:  IDVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKA
        I +K  PA    +DLHRLEVIAGSYLAVGGA+MGMVR GSGRMSLFGCLVA+WGIV RKSSY N   +   +YP MFLAV LAFLSVR+DVRRI+RCVKA
Subjt:  IDVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKA

Query:  RATSSWKK
        +   SWKK
Subjt:  RATSSWKK

XP_022159190.1 uncharacterized protein LOC111025611 [Momordica charantia]

1.9e-69

69.05

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Query:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPCSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFIDVKP--
        MASSK+LA+TISRT+S LYFLLIFFQIPLFRVPC R  SCTTPLELTCSQ LASE+FP   V+ALLYPGAI KA+LRN+PIPTF++L  LYKFI +K   
Subjt:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPCSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFIDVKP--

Query:  -----AADLHRLEVIAGSYLAVGGAVMGMVR----HGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKARA
              +DLHRLEVIAGSYLAV GA+MGMVR     GSGRMSLFGCL+A+WGIV  K SYLNPK E   +YP MF+AV  AFLSVR+DVRRI+R ++   
Subjt:  -----AADLHRLEVIAGSYLAVGGAVMGMVR----HGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKARA

Query:  TSSWKKVKCK
          SWKK K K
Subjt:  TSSWKKVKCK

XP_022992029.1 uncharacterized protein LOC111488501 [Cucurbita maxima]

1.0e-67

70.53

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Query:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFI
        MASSKK A+TISRT+SSLYFLLIF Q+PLFRVPC      S + SCTTPLELTCSQ L+S+VFP   V+ LLYPGAIAKA+ +NKPIP F +L  +YKFI
Subjt:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFI

Query:  DVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKAR
         +K  PA    +DLHRLEVIAGSYLAVGGA+MGMVR GSGRMSLFGCLVA+WGIV RKSSY N   +   +YP MFLAV LAFLSVR+DVRRI+RCVKA+
Subjt:  DVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKAR

Query:  ATSSWKK
           SWKK
Subjt:  ATSSWKK

XP_023548699.1 uncharacterized protein LOC111807273 [Cucurbita pepo subsp. pepo]

2.3e-67

69.86

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Query:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC--------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYK
        MASSKK A+TISRT+SSLYFLLIF Q+PLFRVPC        S   SCTTPLELTCSQ L+S+VFP   V+ LLYPGAIAKA+ +NKPIP F +L  +YK
Subjt:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC--------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYK

Query:  FIDVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVK
        FI +K  PA    +DLHRLEVIAGSYLAVGGA+MGMVR GSGRMSLFGCLVA+WGIV RKSSY N   +   +YP MFLAV LAFLSVR+DVRRI+RCVK
Subjt:  FIDVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVK

Query:  ARATSSWKK
        A+   SWKK
Subjt:  ARATSSWKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6D6 Uncharacterized protein

4.7e-58

64.85

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Query:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPCSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFIDVKP--
        M SSK+ A+TIS T+SSLYFL+I FQIPLFRV C R   CTTPLELTCSQ LASEVF    VK +LYPGAIAKA+  NKPIP F +L  LYKFI      
Subjt:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPCSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFIDVKP--

Query:  AADLHRLE------------VIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME-----LYPNMFLAVALAFLSVRRDVRRIIRC
        ++DLHRLE            VIAGSYLAVGG +MGMVR G GRMSLFGCL+ IWGIV RKSSYLNP  E     +YP MFL + LAFLSVR+DVRRI+R 
Subjt:  AADLHRLE------------VIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME-----LYPNMFLAVALAFLSVRRDVRRIIRC

Query:  VK
        +K
Subjt:  VK

A0A1S3CDX1 uncharacterized protein LOC103499782

3.8e-60

66.84

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Query:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPCSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFIDVKP--
        M SS + A+TIS T+SSLYFL+I FQIPLFRV C R   CTTPLELTCSQ LASEVF    VK +LYPGAIAKA+  NKPIP F++L  LYKFI      
Subjt:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPCSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFIDVKP--

Query:  AADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME-----LYPNMFLAVALAFLSVRRDVRRIIRCVKARA
         +DLHRLEVIAGSYLAVGG +MGMVR G GRMSLFGCL+ +WGIV RKSSYLNP  E     +YP MFL + LAFLSVR+DVRRI+R +K ++
Subjt:  AADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME-----LYPNMFLAVALAFLSVRRDVRRIIRCVKARA

A0A6J1DXZ5 uncharacterized protein LOC111025611

9.1e-70

69.05

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Query:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPCSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFIDVKP--
        MASSK+LA+TISRT+S LYFLLIFFQIPLFRVPC R  SCTTPLELTCSQ LASE+FP   V+ALLYPGAI KA+LRN+PIPTF++L  LYKFI +K   
Subjt:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPCSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFIDVKP--

Query:  -----AADLHRLEVIAGSYLAVGGAVMGMVR----HGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKARA
              +DLHRLEVIAGSYLAV GA+MGMVR     GSGRMSLFGCL+A+WGIV  K SYLNPK E   +YP MF+AV  AFLSVR+DVRRI+R ++   
Subjt:  -----AADLHRLEVIAGSYLAVGGAVMGMVR----HGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKARA

Query:  TSSWKKVKCK
          SWKK K K
Subjt:  TSSWKKVKCK

A0A6J1GMZ9 uncharacterized protein LOC111455879

5.5e-67

69.23

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Query:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC-------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKF
        MASSKK A+TISRT+SSLYFLLIF Q+PLFRVPC       S + SCTTPLELTCSQ L+S+VFP   V+ LLYPGAIAKA+ +NKPIP F +L  +YKF
Subjt:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC-------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKF

Query:  IDVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKA
        I +K  PA    +DLHRLEVIAGSYLAVGGA+MGMVR GSGRMSLFGCLVA+WGIV RKS+Y +   +   +YP MFLAV LAFLSVR+DVRRI+RCVKA
Subjt:  IDVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKA

Query:  RATSSWKK
        +   SWKK
Subjt:  RATSSWKK

A0A6J1JWG5 uncharacterized protein LOC111488501

5.0e-68

70.53

Show/hide

Query:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFI
        MASSKK A+TISRT+SSLYFLLIF Q+PLFRVPC      S + SCTTPLELTCSQ L+S+VFP   V+ LLYPGAIAKA+ +NKPIP F +L  +YKFI
Subjt:  MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPC------SRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFI

Query:  DVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKAR
         +K  PA    +DLHRLEVIAGSYLAVGGA+MGMVR GSGRMSLFGCLVA+WGIV RKSSY N   +   +YP MFLAV LAFLSVR+DVRRI+RCVKA+
Subjt:  DVK--PA----ADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKME---LYPNMFLAVALAFLSVRRDVRRIIRCVKAR

Query:  ATSSWKK
           SWKK
Subjt:  ATSSWKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G80200.1 unknown protein

1.6e-26

35.93

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Query:  SSKKLASTISRTSSSLYFLLIFFQIPLFRVP----------------------------CSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKA
        S KK AS IS  +SSL+ LLI FQIPLFRV                               R  SC TPLE+  S+ +A+++ P   VK LLYPGAI K+
Subjt:  SSKKLASTISRTSSSLYFLLIFFQIPLFRVP----------------------------CSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKA

Query:  VLRNKPIPTFDTLRNLYKFIDV----KPAADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVL------RKSSYLNP---KMELYPNMF
        +     IP++  L   Y F  +      A D+H LEV AGS L + GA++ + +    R++  G L+  WG++           +++P    + +YP +F
Subjt:  VLRNKPIPTFDTLRNLYKFIDV----KPAADLHRLEVIAGSYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVL------RKSSYLNP---KMELYPNMF

Query:  LAVALAFLSVRRDVRRIIRCVKARATSSWKK
        LA   AFLS+R DVR+IIRC  +   S   K
Subjt:  LAVALAFLSVRRDVRRIIRCVKARATSSWKK

AT5G11280.1 unknown protein

3.2e-35

44.44

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Query:  SSSLYFLLIFFQIPLFRVPCSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFIDVKPAA---DLHRLEVIAGS
        +SS+YF+LI FQIPLFRVPC R+G C++P+ +T SQ ++SE+FP   +KALLYPGA+   +  N   P ++ + ++Y   +VK A+   DL RLEV+AGS
Subjt:  SSSLYFLLIFFQIPLFRVPCSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFIDVKPAA---DLHRLEVIAGS

Query:  YLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIV----LRKSSYLNP--KMELYPNMFLAVALAFLSVRRDVRRIIRCVKAR
        Y +V GA +G+++   GRMS+FG L+ +WG+V    L K    +P   + +YP M LA+  AF  ++ D+R+  R   AR
Subjt:  YLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIV----LRKSSYLNP--KMELYPNMFLAVALAFLSVRRDVRRIIRCVKAR

Sequences

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CDS sequence

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ATGGCTTCTTCCAAAAAATTGGCATCCACCATTTCTCGCACTTCCTCCTCTTTATATTTTCTTCTCATTTTCTTCCAAATTCCTCTTTTCAGGGTCCCATGCAGCAGAGC
AGGATCATGCACAACCCCACTAGAATTGACATGCTCACAATTTCTAGCAAGCGAGGTCTTTCCCCAACGAGCCGTAAAAGCACTTCTCTATCCGGGCGCCATAGCAAAAG
CCGTCCTTCGAAACAAGCCCATCCCCACCTTCGATACCTTGCGAAACCTTTACAAGTTCATCGATGTCAAACCGGCTGCCGATCTCCACCGCCTCGAGGTGATTGCAGGG
AGTTATTTGGCTGTGGGGGGAGCTGTAATGGGCATGGTTAGACATGGGAGTGGGAGAATGAGTTTGTTTGGTTGCCTTGTTGCTATTTGGGGAATTGTTCTGAGGAAATC
TTCATATTTAAATCCCAAAATGGAATTGTATCCAAACATGTTTCTTGCTGTGGCTTTGGCTTTCTTGTCTGTCAGGAGGGATGTCAGGAGAATAATTCGTTGTGTCAAAG
CTCGAGCCACTTCTTCATGGAAGAAGGTCAAATGCAAATGA

mRNA sequence

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Protein sequence

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MASSKKLASTISRTSSSLYFLLIFFQIPLFRVPCSRAGSCTTPLELTCSQFLASEVFPQRAVKALLYPGAIAKAVLRNKPIPTFDTLRNLYKFIDVKPAADLHRLEVIAG
SYLAVGGAVMGMVRHGSGRMSLFGCLVAIWGIVLRKSSYLNPKMELYPNMFLAVALAFLSVRRDVRRIIRCVKARATSSWKKVKCK

Sed0026368 (gene) of Chayote v1 genome