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Sed0026387 (gene) of Chayote v1 genome

Gene IDSed0026387
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG10:1083162..1083407
RNA-Seq ExpressionSed0026387
SyntenySed0026387
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146810.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus]1.6e-2776.32Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        S + V+GVKE    YRGMRKIGSSPP CEH+CYG IPCEAIQVPT   R +HVGVQYTNYEPEGWKCKCGPSF++P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

XP_008447616.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo]2.8e-2773.68Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        S + V+G+KE    YRGMRKIGSSPP CEH+CYG IPCEAIQVPT   R +H+GVQYTNYEPEGWKCKCGPSF++P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

XP_022955437.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]1.5e-2877.92Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        SVK V EGV + G +YRGMRKIGSSPP CEH+CYG  PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGPSF++P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

XP_022980756.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]1.9e-2877.92Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        SVK V EGV + G +YRGMRKIGSSPP CEH+CYG  PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGPSF++P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

XP_023526549.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]1.5e-2877.92Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        SVK V EGV + G +YRGMRKIGSSPP CEH+CYG  PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGPSF++P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

TrEMBL top hitse value%identityAlignment
A0A0A0LCQ8 Epidermal patterning factor-like protein2.1e-2877.33Show/hide
Query:  VKVVEGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        +K V+GVKE    YRGMRKIGSSPP CEH+CYG IPCEAIQVPT   R +HVGVQYTNYEPEGWKCKCGPSF++P
Subjt:  VKVVEGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

A0A1S3BIS6 Epidermal patterning factor-like protein1.4e-2773.68Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        S + V+G+KE    YRGMRKIGSSPP CEH+CYG IPCEAIQVPT   R +H+GVQYTNYEPEGWKCKCGPSF++P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

A0A5D3BVF6 Epidermal patterning factor-like protein1.4e-2773.68Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        S + V+G+KE    YRGMRKIGSSPP CEH+CYG IPCEAIQVPT   R +H+GVQYTNYEPEGWKCKCGPSF++P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

A0A6J1GTM4 Epidermal patterning factor-like protein7.2e-2977.92Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        SVK V EGV + G +YRGMRKIGSSPP CEH+CYG  PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGPSF++P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

A0A6J1IUG9 Epidermal patterning factor-like protein9.4e-2977.92Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        SVK V EGV + G +YRGMRKIGSSPP CEH+CYG  PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGPSF++P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 31.2e-1256.6Show/hide
Query:  RKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP
        R+IGS PP CE +CYG  PCEAIQ PT +    H+   Y NY+PEGW+C C P
Subjt:  RKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 69.7e-0740.98Show/hide
Query:  RGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        R +R +GSSPP C  +C    PC+ + VP     GT V  +   Y PE W+CKCG   + P
Subjt:  RGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 18.0e-0939.47Show/hide
Query:  KIGSSPPMCEHECYGFIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKCKCGPSFHNP
        ++GS+PP C + C    PC AIQVPT   R                    T V  QY+NY+P GWKC C   F+NP
Subjt:  KIGSSPPMCEHECYGFIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKCKCGPSFHNP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 51.6e-0438.18Show/hide
Query:  GSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        GS PPMC  +C    PC+A+ VP          +    Y PE W+CKCG     P
Subjt:  GSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 28.0e-0940Show/hide
Query:  GVKENGVMYRGMRKIGSSPPMCEH-ECYGFIPCEAIQVPTNNKRGTHV-------------------GVQYTNYEPEGWKCKCGPSFHNP
        G ++  +M RG+  IGS PP CE   C     CEAIQVPTN +   H                    G   TNY+P  WKCKCG S +NP
Subjt:  GVKENGVMYRGMRKIGSSPPMCEH-ECYGFIPCEAIQVPTNNKRGTHV-------------------GVQYTNYEPEGWKCKCGPSFHNP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related6.9e-0840.98Show/hide
Query:  RGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        R +R +GSSPP C  +C    PC+ + VP     GT V  +   Y PE W+CKCG   + P
Subjt:  RGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

AT2G30370.2 allergen-related6.9e-0840.98Show/hide
Query:  RGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP
        R +R +GSSPP C  +C    PC+ + VP     GT V  +   Y PE W+CKCG   + P
Subjt:  RGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP

AT3G13898.1 unknown protein8.4e-1456.6Show/hide
Query:  RKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP
        R+IGS PP CE +CYG  PCEAIQ PT +    H+   Y NY+PEGW+C C P
Subjt:  RKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP

AT4G37810.1 unknown protein5.7e-1040Show/hide
Query:  GVKENGVMYRGMRKIGSSPPMCEH-ECYGFIPCEAIQVPTNNKRGTHV-------------------GVQYTNYEPEGWKCKCGPSFHNP
        G ++  +M RG+  IGS PP CE   C     CEAIQVPTN +   H                    G   TNY+P  WKCKCG S +NP
Subjt:  GVKENGVMYRGMRKIGSSPPMCEH-ECYGFIPCEAIQVPTNNKRGTHV-------------------GVQYTNYEPEGWKCKCGPSFHNP

AT5G10310.1 unknown protein5.7e-1039.47Show/hide
Query:  KIGSSPPMCEHECYGFIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKCKCGPSFHNP
        ++GS+PP C + C    PC AIQVPT   R                    T V  QY+NY+P GWKC C   F+NP
Subjt:  KIGSSPPMCEHECYGFIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKCKCGPSFHNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTGTAAAGGAAAATGGAGTAATGTACAGAGGGATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACGAGTG
CTATGGATTCATCCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGCACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGT
GTGGCCCTTCCTTTCACAACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTGTAAAGGAAAATGGAGTAATGTACAGAGGGATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACGAGTG
CTATGGATTCATCCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGCACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGT
GTGGCCCTTCCTTTCACAACCCTTGA
Protein sequenceShow/hide protein sequence
MQLWLSVKVVEGVKENGVMYRGMRKIGSSPPMCEHECYGFIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFHNP