; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026392 (gene) of Chayote v1 genome

Gene IDSed0026392
OrganismSechium edule (Chayote v1)
DescriptionNB-ARC domain-containing protein
Genome locationLG13:11921797..11923884
RNA-Seq ExpressionSed0026392
SyntenySed0026392
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046872.1 uncharacterized protein E6C27_scaffold230G00270 [Cucumis melo var. makuwa]4.9e-3867.12Show/hide
Query:  VAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNNGMK
        V  NNR+R+LK G  HRDLR+ I QFLTGV  FAVDSTIF+SL AV+GKNQ HKI Q G K+     SLNE+KPEE+KL+MD KMQAEMEE E + N MK
Subjt:  VAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNNGMK

Query:  QL--HCTSANIV-DGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL
        Q   HCTSA IV D S+PLKK P E DKG A V++NKKRIFIRSRL
Subjt:  QL--HCTSANIV-DGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL

KAG6577390.1 hypothetical protein SDJN03_24964, partial [Cucurbita argyrosperma subsp. sororia]2.0e-4471.23Show/hide
Query:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNN
        M DVAGNNR+R+LK GFHHRDLRT I+ FL GV  FAVDSTIFTSL AV+G NQ +KI Q G K+    PSLNEK+PEELKL+MD KM AEMEE E + N
Subjt:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNN

Query:  GMKQLHCTSANIVDGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL
         MK  HCTSANIVDGS PLKK P E  KG A VM+NKKRIFIRSRL
Subjt:  GMKQLHCTSANIVDGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL

XP_022142728.1 uncharacterized protein LOC111012775 [Momordica charantia]2.8e-4168.92Show/hide
Query:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHK-IGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHN
        MADVAG+ R R+LK GFHH DLR  I+QFLTGV  FAVDSTIF SL A  GKN+ HK I Q G K+     SLN+KKPEELKL+MDKKMQAEMEE EE  
Subjt:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHK-IGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHN

Query:  NGMKQLHCTSANIVDGSQPLKKSPKEDDKGLAKVMEN-KKRIFIRSRL
        N MKQ HCTSANIV GS+PLKK P E  KG A  ++N KKRIFIRSRL
Subjt:  NGMKQLHCTSANIVDGSQPLKKSPKEDDKGLAKVMEN-KKRIFIRSRL

XP_023552444.1 uncharacterized protein LOC111810104 [Cucurbita pepo subsp. pepo]2.5e-4269.18Show/hide
Query:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNN
        M DV GNNR+R+L  GFHHRDLRT I+ FL GV  FAVDSTIFTSL AV+G NQ +KI Q G K+    PSLNEK+PEELKL+MD KM AEMEE E + N
Subjt:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNN

Query:  GMKQLHCTSANIVDGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL
         MK  HCTSANI DGS PLKK P E  KG A VM+NKKRIFIRSRL
Subjt:  GMKQLHCTSANIVDGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL

XP_038905013.1 uncharacterized protein LOC120091185 [Benincasa hispida]1.1e-4267.81Show/hide
Query:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNN
        M DV GNNR+R+L+ GFHHRDLRT I+QFLTGV  FAVDST F+SL AV+GKNQ HK+G  G K+     SLNEKKPEELKL++D KMQAEME+ E   N
Subjt:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNN

Query:  GMKQLHCTSANIVDGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL
         MKQ HCTSA IVD S+PLKK P E  KG A  ++NKKRIFIRSRL
Subjt:  GMKQLHCTSANIVDGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL

TrEMBL top hitse value%identityAlignment
A0A0A0L6J4 Uncharacterized protein1.4e-3561.78Show/hide
Query:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMD--------KKMQAEM
        M DV GNNR R LK    HRD+RT I+QFLTGV  FAVDSTIF+SL AV+GK++ HKI Q G K+     SLNEKKPEE+KL+M          KMQAEM
Subjt:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMD--------KKMQAEM

Query:  EEGEEHNNGMKQL--HCTSANIV-DGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL
        EE E + N MKQ   HCTSA IV D S+PLKK   E DKG A V++NKKRIFIRSRL
Subjt:  EEGEEHNNGMKQL--HCTSANIV-DGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL

A0A1S3BUM3 uncharacterized protein LOC1034933572.4e-3867.12Show/hide
Query:  VAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNNGMK
        V  NNR+R+LK G  HRDLR+ I QFLTGV  FAVDSTIF+SL AV+GKNQ HKI Q G K+     SLNE+KPEE+KL+MD KMQAEMEE E + N MK
Subjt:  VAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNNGMK

Query:  QL--HCTSANIV-DGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL
        Q   HCTSA IV D S+PLKK P E DKG A V++NKKRIFIRSRL
Subjt:  QL--HCTSANIV-DGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL

A0A5D3BVT6 Uncharacterized protein2.4e-3867.12Show/hide
Query:  VAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNNGMK
        V  NNR+R+LK G  HRDLR+ I QFLTGV  FAVDSTIF+SL AV+GKNQ HKI Q G K+     SLNE+KPEE+KL+MD KMQAEMEE E + N MK
Subjt:  VAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNNGMK

Query:  QL--HCTSANIV-DGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL
        Q   HCTSA IV D S+PLKK P E DKG A V++NKKRIFIRSRL
Subjt:  QL--HCTSANIV-DGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL

A0A6J1CP03 uncharacterized protein LOC1110127751.3e-4168.92Show/hide
Query:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHK-IGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHN
        MADVAG+ R R+LK GFHH DLR  I+QFLTGV  FAVDSTIF SL A  GKN+ HK I Q G K+     SLN+KKPEELKL+MDKKMQAEMEE EE  
Subjt:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHK-IGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHN

Query:  NGMKQLHCTSANIVDGSQPLKKSPKEDDKGLAKVMEN-KKRIFIRSRL
        N MKQ HCTSANIV GS+PLKK P E  KG A  ++N KKRIFIRSRL
Subjt:  NGMKQLHCTSANIVDGSQPLKKSPKEDDKGLAKVMEN-KKRIFIRSRL

A0A7N2M8R1 Uncharacterized protein1.3e-1545.33Show/hide
Query:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLN-EKKPEELKLLMDKKMQAEMEEGEEHN
        MAD    +R+R LK+   + D R  I + LT +  FAVDS +  SL AV G  Q H+I Q+G K+    PSLN EKK E+LKL+M+ ++QA MEE +E  
Subjt:  MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLN-EKKPEELKLLMDKKMQAEMEEGEEHN

Query:  NGMKQLHCTSANIVDGS---QPLKKSPKEDDKGLAKVMENKKRIFIRSRL
        +  KQ +  SA  V  S   +P KK+P E +K L     +KKR+FIRSRL
Subjt:  NGMKQLHCTSANIVDGS---QPLKKSPKEDDKGLAKVMENKKRIFIRSRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACGTCGCCGGAAACAACCGTCTCCGGAGTCTGAAACAAGGCTTCCACCACCGTGACCTGAGAACGACGATCGTTCAATTCCTCACTGGCGTCGCCAACTTTGC
TGTGGACTCCACCATCTTCACCTCTCTCAACGCCGTCGCCGGTAAGAATCAGGAGCATAAGATTGGGCAGCAAGGATCAAAGAATGCATCCCGTTTGCCCTCTTTAAATG
AAAAGAAACCGGAAGAGCTTAAGCTATTGATGGATAAGAAGATGCAGGCAGAGATGGAGGAAGGAGAGGAGCACAATAATGGAATGAAGCAACTCCATTGTACATCTGCA
AACATTGTTGATGGCTCTCAACCTCTGAAGAAATCACCAAAGGAAGACGACAAAGGGTTAGCAAAAGTAATGGAAAACAAGAAAAGGATTTTCATCCGTTCCCGACTTTA
G
mRNA sequenceShow/hide mRNA sequence
ATTTACATTTCAGCCGCCTACACGACGGATCACGAAACTGGTTCCATTGAAGCCCCAAAACTTTGGTCGATAAATGGCTGACGTCGCCGGAAACAACCGTCTCCGGAGTC
TGAAACAAGGCTTCCACCACCGTGACCTGAGAACGACGATCGTTCAATTCCTCACTGGCGTCGCCAACTTTGCTGTGGACTCCACCATCTTCACCTCTCTCAACGCCGTC
GCCGGTAAGAATCAGGAGCATAAGATTGGGCAGCAAGGATCAAAGAATGCATCCCGTTTGCCCTCTTTAAATGAAAAGAAACCGGAAGAGCTTAAGCTATTGATGGATAA
GAAGATGCAGGCAGAGATGGAGGAAGGAGAGGAGCACAATAATGGAATGAAGCAACTCCATTGTACATCTGCAAACATTGTTGATGGCTCTCAACCTCTGAAGAAATCAC
CAAAGGAAGACGACAAAGGGTTAGCAAAAGTAATGGAAAACAAGAAAAGGATTTTCATCCGTTCCCGACTTTAGAGAATCGAGTCCATTGTCGTAGCCGCAGGAGCAACA
GCAAGAATAATGAATGCTTTCTTGACTAGGTATGTAAGTTGTAGATAGAGTTAAATGTAAAGGTTAGCTTCATACTTTATCATTTCAAAAGCTGTACATCCAATATTTTG
ATGGATGGTTTTCTTGATTCATAGCAAGTTGAATAAAAATACCTCTCTTGTTCTGTTATTCTGTTTATGTTTTAAGAGTGTGATTTGTTTATGTTTTAAGAGTGTGATTT
GACTATGCACATTTTGTAAGTCCCTTTCCCTTCCTGAC
Protein sequenceShow/hide protein sequence
MADVAGNNRLRSLKQGFHHRDLRTTIVQFLTGVANFAVDSTIFTSLNAVAGKNQEHKIGQQGSKNASRLPSLNEKKPEELKLLMDKKMQAEMEEGEEHNNGMKQLHCTSA
NIVDGSQPLKKSPKEDDKGLAKVMENKKRIFIRSRL