; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026395 (gene) of Chayote v1 genome

Gene IDSed0026395
OrganismSechium edule (Chayote v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG03:9409814..9410560
RNA-Seq ExpressionSed0026395
SyntenySed0026395
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR007527 - Zinc finger, SWIM-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039903 - E3 ubiquitin-protein ligase Zswim2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020300.1 Mitogen-activated protein kinase kinase kinase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-10078.88Show/hide
Query:  MESVASTSSPPDCPHVHLPQFEP--FVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR
        MESVASTSS PD P   LP FEP   ++ARI RAL H LRLLH SDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKH+LF+YIRALGVSLDDVCL R
Subjt:  MESVASTSSPPDCPHVHLPQFEP--FVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR

Query:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKER-ACVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIVSCVVC
        R LRPCQLNRLL +PV  ESLAEI LRRVFHQQF QVKER +CV +VD+EDG  CPVCLDD+KK D+VVACTTCRNLVH+DCFSRWKRSKGR  +SCVVC
Subjt:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKER-ACVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIVSCVVC

Query:  RARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD
        RARWKD  N+QKYLNLSAY++EH  +DNN Y+
Subjt:  RARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD

XP_016899980.1 PREDICTED: uncharacterized protein LOC103488177 [Cucumis melo]2.1e-9775.95Show/hide
Query:  MESVASTSSPPDCPHVHLPQFEPF--VSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR
        MESVASTSSP       +P+F+P   V+ RI RAL H LRLLH S S+FFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIY++ALG+SLDDVCLRR
Subjt:  MESVASTSSPPDCPHVHLPQFEPF--VSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR

Query:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERA------CVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIV
        R LRPCQLNRLL +P+ ++SLAEIGLR+VFHQQF QV +RA      CVTV DMEDGT CPVCLDDMKK D+VVAC+TCRNLVHEDCF+RWKRSKGR  V
Subjt:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERA------CVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIV

Query:  SCVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD
        SCVVCRARWKDT+++QKYLNLSAY+NEH  ID+NLY+
Subjt:  SCVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD

XP_022951525.1 mitogen-activated protein kinase kinase kinase 1 [Cucurbita moschata]3.6e-10278.81Show/hide
Query:  SFQILMESVASTSSPPDCPHVHLPQFEP--FVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDD
        +FQILMESVASTSS PD P   LP FEP   ++ARI RAL H LRLLH SDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKH+LF+YIRALGVSLDD
Subjt:  SFQILMESVASTSSPPDCPHVHLPQFEP--FVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDD

Query:  VCLRRRKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERACVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIVS
         CL RR LRPCQLNRLL +PV  ESLAEI LRRVFHQQF QVKER CV +VD+EDG  CPVCLDD+ K D+VVACTTCRNLVH+DCFSRWKRSKGR  +S
Subjt:  VCLRRRKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERACVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIVS

Query:  CVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD
        CVVCRARWKDT N+QKYLNLSAY++EH  +DNN Y+
Subjt:  CVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD

XP_023537388.1 mitogen-activated protein kinase kinase kinase 1-like [Cucurbita pepo subsp. pepo]1.3e-9980.35Show/hide
Query:  LCFSFQILMESVASTSSPPDCPHVHLPQFEP--FVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVS
        L  +FQILMESVASTSS PD P   LP FEP   ++ARI RAL H LRLLH SDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKH+LF+YIRALGVS
Subjt:  LCFSFQILMESVASTSSPPDCPHVHLPQFEP--FVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVS

Query:  LDDVCLRRRKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKER-ACVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGR
        LDDVCL RR LRPCQLNRLL +PV  ESLAEI LRRVFHQQF QVKER +CV +VD+EDGT CPVCLDD+KK D+VVACTTCRNLVH+DCFSRWKRSKGR
Subjt:  LDDVCLRRRKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKER-ACVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGR

Query:  SIVSCVVCRARWKDTRNQQKYLNLSAYVN
          +SCVVCRARWKDT N+QKYLNLSAY++
Subjt:  SIVSCVVCRARWKDTRNQQKYLNLSAYVN

XP_038885291.1 uncharacterized protein LOC120075728 [Benincasa hispida]3.5e-10580.08Show/hide
Query:  PHL-CFSFQILMESVASTSSPPDCPHVHLPQFE--PFVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRAL
        PHL CFSFQILMESVASTSS       H+P+F+  P V+ RI RAL H LRLLH S S+FFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIY++AL
Subjt:  PHL-CFSFQILMESVASTSSPPDCPHVHLPQFE--PFVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRAL

Query:  GVSLDDVCLRRRKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERACVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSK
        G+SLDD CLRRR LRPCQLNRLL +P+ ++SLAE+GLR VFHQQF QVKERA VTVVDMEDGTTCPVCLDDMKKKD+VVAC+TCRNLVHEDCFSRWKRSK
Subjt:  GVSLDDVCLRRRKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERACVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSK

Query:  GRSIVSCVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLY
        GR  VSCVVCRARWKD ++QQKYLNLSAY+NEH  ID+NLY
Subjt:  GRSIVSCVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLY

TrEMBL top hitse value%identityAlignment
A0A0A0LS10 SWIM-type domain-containing protein2.6e-9374.58Show/hide
Query:  MESVASTSSPPDCPHVHLPQFEPF--VSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR
        MESVASTSSP       +P+F+P   V+ RI RAL H LRLLH S S+FFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIY++ALG+SLDDVCLRR
Subjt:  MESVASTSSPPDCPHVHLPQFEPF--VSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR

Query:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERAC-------VTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSI
        R LRPCQLNRLL +P+ ++SLAEIGLR+VFHQQF QV +RA        VTV DMEDG+ CPVCLDDMKKKD+VVAC+TCRNLVHEDCF+RWKRSKGR  
Subjt:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERAC-------VTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSI

Query:  VSCVVCRARWKDTRN-QQKYLNLSAY-VNEHGVIDNNLYD
        VSCVVCRARWKDT++ QQKYLNLSAY +NEH  ID  LY+
Subjt:  VSCVVCRARWKDTRN-QQKYLNLSAY-VNEHGVIDNNLYD

A0A1S4DW96 uncharacterized protein LOC1034881771.0e-9775.95Show/hide
Query:  MESVASTSSPPDCPHVHLPQFEPF--VSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR
        MESVASTSSP       +P+F+P   V+ RI RAL H LRLLH S S+FFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIY++ALG+SLDDVCLRR
Subjt:  MESVASTSSPPDCPHVHLPQFEPF--VSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR

Query:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERA------CVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIV
        R LRPCQLNRLL +P+ ++SLAEIGLR+VFHQQF QV +RA      CVTV DMEDGT CPVCLDDMKK D+VVAC+TCRNLVHEDCF+RWKRSKGR  V
Subjt:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERA------CVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIV

Query:  SCVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD
        SCVVCRARWKDT+++QKYLNLSAY+NEH  ID+NLY+
Subjt:  SCVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD

A0A5A7VCN6 SWIM-type domain-containing protein1.0e-9775.95Show/hide
Query:  MESVASTSSPPDCPHVHLPQFEPF--VSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR
        MESVASTSSP       +P+F+P   V+ RI RAL H LRLLH S S+FFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIY++ALG+SLDDVCLRR
Subjt:  MESVASTSSPPDCPHVHLPQFEPF--VSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR

Query:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERA------CVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIV
        R LRPCQLNRLL +P+ ++SLAEIGLR+VFHQQF QV +RA      CVTV DMEDGT CPVCLDDMKK D+VVAC+TCRNLVHEDCF+RWKRSKGR  V
Subjt:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERA------CVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIV

Query:  SCVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD
        SCVVCRARWKDT+++QKYLNLSAY+NEH  ID+NLY+
Subjt:  SCVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD

A0A6J1BPZ4 uncharacterized protein LOC1110047031.8e-9475.11Show/hide
Query:  MESVASTSSPPDCPHVHLPQFEP--FVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR
        MESVASTSSPP  P +HL +F+P   V+ RI RAL H LRLLH SDS+FFVLGATGNVYIVSLS+TPSC+CPDRITPCKHILFIYIRALGVSLDD CLRR
Subjt:  MESVASTSSPPDCPHVHLPQFEP--FVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLRR

Query:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERACVTVVDMEDGTTCPVCLDDMKK--KDQVVACTTCRNLVHEDCFSRWKRSKGRSIVSCVV
        R LRPC LNRLL +P+ +ES+A IG+RRVFHQ+F QVK RA  +VVD+EDGTTCPVCLD+MKK   D+VVAC TCRN+VHEDCF RWKRSKGR  VSCVV
Subjt:  RKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERACVTVVDMEDGTTCPVCLDDMKK--KDQVVACTTCRNLVHEDCFSRWKRSKGRSIVSCVV

Query:  CRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD
        CRARW+DT  Q+KYLNLSAY+NE   I+N+LY+
Subjt:  CRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD

A0A6J1GJ16 mitogen-activated protein kinase kinase kinase 11.8e-10278.81Show/hide
Query:  SFQILMESVASTSSPPDCPHVHLPQFEP--FVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDD
        +FQILMESVASTSS PD P   LP FEP   ++ARI RAL H LRLLH SDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKH+LF+YIRALGVSLDD
Subjt:  SFQILMESVASTSSPPDCPHVHLPQFEP--FVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDD

Query:  VCLRRRKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERACVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIVS
         CL RR LRPCQLNRLL +PV  ESLAEI LRRVFHQQF QVKER CV +VD+EDG  CPVCLDD+ K D+VVACTTCRNLVH+DCFSRWKRSKGR  +S
Subjt:  VCLRRRKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERACVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIVS

Query:  CVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD
        CVVCRARWKDT N+QKYLNLSAY++EH  +DNN Y+
Subjt:  CVVCRARWKDTRNQQKYLNLSAYVNEHGVIDNNLYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11620.1 SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related6.7e-4641.6Show/hide
Query:  MESVASTSSPPDCPHVHLPQF--EPFVSARIARALQHDLRLLHHSDS-SFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLR
        MESV S    P   +     F  +P V+ RI RAL+H +RLLH  ++ +F VLGAT NVY V+L +TP+CTCPDR  PCKHILF+ IR LG+ LDD CLR
Subjt:  MESVASTSSPPDCPHVHLPQF--EPFVSARIARALQHDLRLLHHSDS-SFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLDDVCLR

Query:  RRKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERACVTV------------VDMEDGTTCPVCLDDM--------------KKKDQVVACTTC
        +R+LR C L  L  +P R + LA   L++ F Q F     +   T             VD E+  TCP+CLDD+              +K+  VV C  C
Subjt:  RRKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERACVTV------------VDMEDGTTCPVCLDDM--------------KKKDQVVACTTC

Query:  RNLVHEDCFSRWKRSKGRSIVSCVVCRARWKDTRNQQK--------------YLNLSAYVNE
        +N VH++C   W++S+GR    CVVCRARW   R+ +               YLNL+ YV+E
Subjt:  RNLVHEDCFSRWKRSKGRSIVSCVVCRARWKDTRNQQK--------------YLNLSAYVNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTATCTCAAAAGTGGTTACCCCATCTTTGCTTTTCCTTCCAAATTCTCATGGAGTCCGTTGCCTCTACTTCATCCCCACCGGACTGCCCCCATGTTCACCTTCC
TCAGTTCGAGCCCTTCGTGTCTGCCCGGATAGCTCGTGCTCTCCAACATGACCTCCGTCTCCTTCACCACTCCGATTCTAGTTTCTTTGTGCTGGGAGCCACAGGCAATG
TCTACATCGTGTCTCTATCCTCCACCCCCTCGTGCACTTGCCCCGATCGTATTACCCCATGCAAACACATACTGTTTATCTACATTCGAGCCCTGGGTGTGTCGCTGGAT
GATGTATGTCTTCGGCGGAGAAAGCTTCGACCTTGCCAATTGAATCGTTTGCTTGTTTCACCTGTTAGGATAGAGTCGCTTGCTGAAATTGGCCTACGTAGAGTATTTCA
TCAACAATTCTCTCAGGTAAAGGAGAGAGCTTGTGTAACTGTTGTAGATATGGAAGATGGGACTACGTGTCCGGTGTGTTTGGATGATATGAAGAAGAAGGATCAAGTGG
TGGCTTGTACGACATGTCGAAATCTTGTTCACGAAGATTGTTTCTCGAGGTGGAAACGGAGCAAGGGAAGGAGTATCGTTAGTTGCGTAGTTTGTAGAGCAAGATGGAAA
GATACGAGAAACCAACAGAAGTATTTGAATTTATCTGCCTATGTCAATGAGCATGGCGTAATCGACAACAATCTCTATGATGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTATCTCAAAAGTGGTTACCCCATCTTTGCTTTTCCTTCCAAATTCTCATGGAGTCCGTTGCCTCTACTTCATCCCCACCGGACTGCCCCCATGTTCACCTTCC
TCAGTTCGAGCCCTTCGTGTCTGCCCGGATAGCTCGTGCTCTCCAACATGACCTCCGTCTCCTTCACCACTCCGATTCTAGTTTCTTTGTGCTGGGAGCCACAGGCAATG
TCTACATCGTGTCTCTATCCTCCACCCCCTCGTGCACTTGCCCCGATCGTATTACCCCATGCAAACACATACTGTTTATCTACATTCGAGCCCTGGGTGTGTCGCTGGAT
GATGTATGTCTTCGGCGGAGAAAGCTTCGACCTTGCCAATTGAATCGTTTGCTTGTTTCACCTGTTAGGATAGAGTCGCTTGCTGAAATTGGCCTACGTAGAGTATTTCA
TCAACAATTCTCTCAGGTAAAGGAGAGAGCTTGTGTAACTGTTGTAGATATGGAAGATGGGACTACGTGTCCGGTGTGTTTGGATGATATGAAGAAGAAGGATCAAGTGG
TGGCTTGTACGACATGTCGAAATCTTGTTCACGAAGATTGTTTCTCGAGGTGGAAACGGAGCAAGGGAAGGAGTATCGTTAGTTGCGTAGTTTGTAGAGCAAGATGGAAA
GATACGAGAAACCAACAGAAGTATTTGAATTTATCTGCCTATGTCAATGAGCATGGCGTAATCGACAACAATCTCTATGATGGTTAA
Protein sequenceShow/hide protein sequence
MDVSQKWLPHLCFSFQILMESVASTSSPPDCPHVHLPQFEPFVSARIARALQHDLRLLHHSDSSFFVLGATGNVYIVSLSSTPSCTCPDRITPCKHILFIYIRALGVSLD
DVCLRRRKLRPCQLNRLLVSPVRIESLAEIGLRRVFHQQFSQVKERACVTVVDMEDGTTCPVCLDDMKKKDQVVACTTCRNLVHEDCFSRWKRSKGRSIVSCVVCRARWK
DTRNQQKYLNLSAYVNEHGVIDNNLYDG